RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 E9PCH4 1651 aa21.88■■□□□ 1.09
TVP23A-208ENST00000573857 TMEM94Q12767 1356 aa21.88■■□□□ 1.09
TVP23A-208ENST00000573857 TMEM131LA2VDJ0 1609 aa21.88■■□□□ 1.09
TVP23A-208ENST00000573857 RIMS2Q9UQ26 1411 aa21.88■■□□□ 1.09
TVP23A-208ENST00000573857 NUP155O75694 1391 aa21.87■■□□□ 1.09
TVP23A-208ENST00000573857 PLEKHG1Q9ULL1 1385 aa21.87■■□□□ 1.09
TVP23A-208ENST00000573857 BCANQ96GW7 911 aa21.87■■□□□ 1.09
TVP23A-208ENST00000573857 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
TVP23A-208ENST00000573857 NKTRP30414 1462 aaKnown RBP21.85■■□□□ 1.09
TVP23A-208ENST00000573857 HDGFP51858 240 aaKnown RBP21.85■■□□□ 1.09
TVP23A-208ENST00000573857 NWD1Q149M9 1564 aa21.85■■□□□ 1.09
TVP23A-208ENST00000573857 MYO5BQ9ULV0 1848 aa21.85■■□□□ 1.09
TVP23A-208ENST00000573857 PPP1R15AO75807 674 aaPredicted RBP21.84■■□□□ 1.09
TVP23A-208ENST00000573857 PROSER2Q86WR7 435 aaPredicted RBP21.84■■□□□ 1.09
TVP23A-208ENST00000573857 CHGAP10645 457 aaKnown RBP21.83■■□□□ 1.09
TVP23A-208ENST00000573857 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.81■■□□□ 1.08
TVP23A-208ENST00000573857 RBM33Q96EV2 1170 aaKnown RBP21.81■■□□□ 1.08
TVP23A-208ENST00000573857 FAM135BQ49AJ0 1406 aa21.8■■□□□ 1.08
TVP23A-208ENST00000573857 RRBP1Q9P2E9 1410 aaKnown RBP21.8■■□□□ 1.08
TVP23A-208ENST00000573857 TBX22Q9Y458 520 aa21.78■■□□□ 1.08
TVP23A-208ENST00000573857 NUTM2DQ5VT03 806 aaPredicted RBP21.76■■□□□ 1.07
TVP23A-208ENST00000573857 MSH6P52701 1360 aa21.75■■□□□ 1.07
TVP23A-208ENST00000573857 ADAMTS13Q76LX8 1427 aa21.75■■□□□ 1.07
TVP23A-208ENST00000573857 CHD2O14647 1828 aaKnown RBP21.74■■□□□ 1.07
TVP23A-208ENST00000573857 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
TVP23A-208ENST00000573857 DIP2AQ14689 1571 aa21.74■■□□□ 1.07
TVP23A-208ENST00000573857 ROBO1Q9Y6N7 1651 aa21.71■■□□□ 1.07
TVP23A-208ENST00000573857 PIK3R4Q99570 1358 aa21.71■■□□□ 1.07
TVP23A-208ENST00000573857 NAIPQ13075 1403 aa21.71■■□□□ 1.07
TVP23A-208ENST00000573857 SPHKAPQ2M3C7 1700 aa21.7■■□□□ 1.06
TVP23A-208ENST00000573857 NCOA3Q9Y6Q9 1424 aa21.69■■□□□ 1.06
TVP23A-208ENST00000573857 SLAIN2Q9P270 581 aa21.68■■□□□ 1.06
TVP23A-208ENST00000573857 TRPM2O94759 1503 aa21.66■■□□□ 1.06
TVP23A-208ENST00000573857 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
TVP23A-208ENST00000573857 PTPRUQ92729 1446 aa21.63■■□□□ 1.05
TVP23A-208ENST00000573857 SETBP1Q9Y6X0 1596 aa21.63■■□□□ 1.05
TVP23A-208ENST00000573857 ZNF326Q5BKZ1 582 aaKnown RBP21.63■■□□□ 1.05
TVP23A-208ENST00000573857 C14orf37Q86TY3 774 aa21.63■■□□□ 1.05
TVP23A-208ENST00000573857 AMOTL2Q9Y2J4 779 aa21.62■■□□□ 1.05
TVP23A-208ENST00000573857 CLTCL1P53675 1640 aa21.62■■□□□ 1.05
TVP23A-208ENST00000573857 NRXN3Q9Y4C0 1643 aa21.62■■□□□ 1.05
TVP23A-208ENST00000573857 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
TVP23A-208ENST00000573857 CADPS2Q86UW7 1296 aa21.59■■□□□ 1.05
TVP23A-208ENST00000573857 RGS17Q9UGC6 210 aaPredicted RBP21.59■■□□□ 1.05
TVP23A-208ENST00000573857 TRIM52Q96A61 297 aa21.58■■□□□ 1.05
TVP23A-208ENST00000573857 NEXMIFQ5QGS0 1516 aa21.58■■□□□ 1.04
TVP23A-208ENST00000573857 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.58■■□□□ 1.04
TVP23A-208ENST00000573857 ATF3P18847 181 aa21.57■■□□□ 1.04
TVP23A-208ENST00000573857 PHLPP1O60346 1717 aa21.57■■□□□ 1.04
TVP23A-208ENST00000573857 XRN1Q8IZH2 1706 aaKnown RBP21.56■■□□□ 1.04
TVP23A-208ENST00000573857 METP08581 1390 aa21.56■■□□□ 1.04
TVP23A-208ENST00000573857 JCADQ9P266 1359 aa21.54■■□□□ 1.04
TVP23A-208ENST00000573857 SLC4A1APQ9BWU0 796 aaKnown RBP21.53■■□□□ 1.04
TVP23A-208ENST00000573857 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
TVP23A-208ENST00000573857 DCCP43146 1447 aa21.53■■□□□ 1.04
TVP23A-208ENST00000573857 KIF1BO60333 1816 aa21.51■■□□□ 1.03
TVP23A-208ENST00000573857 AHDC1Q5TGY3 1603 aaPredicted RBP21.5■■□□□ 1.03
TVP23A-208ENST00000573857 BRINP3Q76B58 766 aa21.48■■□□□ 1.03
TVP23A-208ENST00000573857 VGFO15240 615 aaPredicted RBP21.47■■□□□ 1.03
TVP23A-208ENST00000573857 POTEAQ6S8J7 498 aa21.47■■□□□ 1.03
TVP23A-208ENST00000573857 RPGRIP1LQ68CZ1 1315 aa21.46■■□□□ 1.03
TVP23A-208ENST00000573857 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
TVP23A-208ENST00000573857 MST1RQ04912 1400 aa21.45■■□□□ 1.02
TVP23A-208ENST00000573857 SPATA31A6Q5VVP1 1343 aa21.44■■□□□ 1.02
TVP23A-208ENST00000573857 ASXL1Q8IXJ9 1541 aa21.44■■□□□ 1.02
TVP23A-208ENST00000573857 FOXD1Q16676 465 aa21.43■■□□□ 1.02
TVP23A-208ENST00000573857 LRP6O75581 1613 aa21.42■■□□□ 1.02
TVP23A-208ENST00000573857 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
TVP23A-208ENST00000573857 SETD1AO15047 1707 aaKnown RBP21.41■■□□□ 1.02
TVP23A-208ENST00000573857 NALCNQ8IZF0 1738 aa21.4■■□□□ 1.02
TVP23A-208ENST00000573857 SHPRHQ149N8 1683 aa21.4■■□□□ 1.02
TVP23A-208ENST00000573857 PRAG1Q86YV5 1406 aa21.39■■□□□ 1.02
TVP23A-208ENST00000573857 ROBO2Q9HCK4 1378 aa21.39■■□□□ 1.02
TVP23A-208ENST00000573857 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
TVP23A-208ENST00000573857 PPLO60437 1756 aa21.38■■□□□ 1.01
TVP23A-208ENST00000573857 MPHOSPH9Q99550 1183 aa21.37■■□□□ 1.01
TVP23A-208ENST00000573857 SETD5Q9C0A6 1442 aa21.37■■□□□ 1.01
TVP23A-208ENST00000573857 MEX3CQ5U5Q3 659 aaKnown RBP21.36■■□□□ 1.01
TVP23A-208ENST00000573857 NHSL1Q5SYE7 1610 aa21.35■■□□□ 1.01
TVP23A-208ENST00000573857 SPATA31E1Q6ZUB1 1445 aa21.34■■□□□ 1.01
TVP23A-208ENST00000573857 C1orf167Q5SNV9 1468 aa21.33■■□□□ 1.01
TVP23A-208ENST00000573857 ADGRF5Q8IZF2 1346 aa21.32■■□□□ 1
TVP23A-208ENST00000573857 DDX17Q92841 729 aaKnown RBP21.32■■□□□ 1
TVP23A-208ENST00000573857 RGL3Q3MIN7 710 aa21.31■■□□□ 1
TVP23A-208ENST00000573857 LRRC59Q96AG4 307 aaKnown RBP21.31■■□□□ 1
TVP23A-208ENST00000573857 NUTM2BA6NNL0 878 aaPredicted RBP21.3■■□□□ 1
TVP23A-208ENST00000573857 NUTM2EB1AL46 878 aaPredicted RBP21.3■■□□□ 1
TVP23A-208ENST00000573857 ZNF772Q68DY9 489 aaPredicted RBP21.3■■□□□ 1
TVP23A-208ENST00000573857 NUTM2AQ8IVF1 878 aaPredicted RBP21.3■■□□□ 1
TVP23A-208ENST00000573857 ANKRD30BQ9BXX2 1392 aa21.3■■□□□ 1
TVP23A-208ENST00000573857 ACIN1Q9UKV3 1341 aaKnown RBP21.28■■□□□ 1
TVP23A-208ENST00000573857 PNPLA6Q8IY17 1366 aa21.27■■□□□ 1
TVP23A-208ENST00000573857 ORAI2Q96SN7 254 aa21.26■□□□□ 0.99
TVP23A-208ENST00000573857 IFT172Q9UG01 1749 aa21.26■□□□□ 0.99
TVP23A-208ENST00000573857 LAMC1P11047 1609 aa21.26■□□□□ 0.99
TVP23A-208ENST00000573857 TECPR2O15040 1411 aa21.25■□□□□ 0.99
TVP23A-208ENST00000573857 PIK3C2GO75747 1445 aa21.25■□□□□ 0.99
TVP23A-208ENST00000573857 LRPPRCP42704 1394 aaKnown RBP21.23■□□□□ 0.99
TVP23A-208ENST00000573857 CDC42BPGQ6DT37 1551 aa21.23■□□□□ 0.99
TVP23A-208ENST00000573857 STK26Q9P289 416 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms