RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 NPHP4O75161 1426 aaPredicted RBP25.34■■□□□ 1.65
LITAF-212ENST00000573332 POLR1AO95602 1720 aaPredicted RBP25.33■■□□□ 1.65
LITAF-212ENST00000573332 SPATA31E1Q6ZUB1 1445 aa25.3■■□□□ 1.64
LITAF-212ENST00000573332 RPGRIP1LQ68CZ1 1315 aa25.3■■□□□ 1.64
LITAF-212ENST00000573332 KIF1BO60333 1816 aa25.29■■□□□ 1.64
LITAF-212ENST00000573332 MYO5BQ9ULV0 1848 aa25.29■■□□□ 1.64
LITAF-212ENST00000573332 ZNF326Q5BKZ1 582 aaKnown RBP25.29■■□□□ 1.64
LITAF-212ENST00000573332 DHX57Q6P158 1386 aaKnown RBP25.29■■□□□ 1.64
LITAF-212ENST00000573332 PLEKHG1Q9ULL1 1385 aa25.27■■□□□ 1.64
LITAF-212ENST00000573332 PPP1R15AO75807 674 aaPredicted RBP25.25■■□□□ 1.63
LITAF-212ENST00000573332 IQGAP1P46940 1657 aa25.24■■□□□ 1.63
LITAF-212ENST00000573332 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
LITAF-212ENST00000573332 VGFO15240 615 aaPredicted RBP25.21■■□□□ 1.63
LITAF-212ENST00000573332 RGL3Q3MIN7 710 aa25.2■■□□□ 1.62
LITAF-212ENST00000573332 NUTM2DQ5VT03 806 aaPredicted RBP25.2■■□□□ 1.62
LITAF-212ENST00000573332 TBX22Q9Y458 520 aa25.17■■□□□ 1.62
LITAF-212ENST00000573332 BCANQ96GW7 911 aa25.15■■□□□ 1.62
LITAF-212ENST00000573332 SLC26A8Q96RN1 970 aa25.15■■□□□ 1.62
LITAF-212ENST00000573332 ZNF335Q9H4Z2 1342 aaPredicted RBP25.14■■□□□ 1.62
LITAF-212ENST00000573332 ADAMTS13Q76LX8 1427 aa25.14■■□□□ 1.62
LITAF-212ENST00000573332 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
LITAF-212ENST00000573332 STAC3Q96MF2 364 aa25.12■■□□□ 1.61
LITAF-212ENST00000573332 LTBP4Q8N2S1 1624 aa25.12■■□□□ 1.61
LITAF-212ENST00000573332 PPLO60437 1756 aa25.11■■□□□ 1.61
LITAF-212ENST00000573332 DIP2AQ14689 1571 aa25.1■■□□□ 1.61
LITAF-212ENST00000573332 ADGRF5Q8IZF2 1346 aa25.09■■□□□ 1.61
LITAF-212ENST00000573332 PIK3R4Q99570 1358 aa25.08■■□□□ 1.61
LITAF-212ENST00000573332 SIN3AQ96ST3 1273 aa25.08■■□□□ 1.61
LITAF-212ENST00000573332 IFT172Q9UG01 1749 aa25.08■■□□□ 1.61
LITAF-212ENST00000573332 MYOM2P54296 1465 aa25.08■■□□□ 1.6
LITAF-212ENST00000573332 NRXN3Q9Y4C0 1643 aa25.08■■□□□ 1.6
LITAF-212ENST00000573332 KCNA6P17658 529 aa25.06■■□□□ 1.6
LITAF-212ENST00000573332 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
LITAF-212ENST00000573332 NRXN1Q9ULB1 1477 aa25.06■■□□□ 1.6
LITAF-212ENST00000573332 CPS1P31327 1500 aa25.05■■□□□ 1.6
LITAF-212ENST00000573332 CERKQ8TCT0 537 aa25.03■■□□□ 1.6
LITAF-212ENST00000573332 DCAF11Q8TEB1 546 aa25.03■■□□□ 1.6
LITAF-212ENST00000573332 PIK3C2GO75747 1445 aa25.03■■□□□ 1.6
LITAF-212ENST00000573332 CLSPNQ9HAW4 1339 aa25.02■■□□□ 1.6
LITAF-212ENST00000573332 NEUROD1Q13562 356 aa25■■□□□ 1.59
LITAF-212ENST00000573332 NWD1Q149M9 1564 aa25■■□□□ 1.59
LITAF-212ENST00000573332 ALKQ9UM73 1620 aa25■■□□□ 1.59
LITAF-212ENST00000573332 METP08581 1390 aa24.99■■□□□ 1.59
LITAF-212ENST00000573332 C14orf93Q9H972 538 aaKnown RBP24.98■■□□□ 1.59
LITAF-212ENST00000573332 IQSEC2Q5JU85 1478 aa24.97■■□□□ 1.59
LITAF-212ENST00000573332 L3MBTL2Q969R5 705 aa24.97■■□□□ 1.59
LITAF-212ENST00000573332 KDM2AQ9Y2K7 1162 aa24.97■■□□□ 1.59
LITAF-212ENST00000573332 NKTRP30414 1462 aaKnown RBP24.96■■□□□ 1.59
LITAF-212ENST00000573332 PTPRUQ92729 1446 aa24.96■■□□□ 1.59
LITAF-212ENST00000573332 STRCP1A6NGW2 1772 aa24.96■■□□□ 1.59
LITAF-212ENST00000573332 AMOTL2Q9Y2J4 779 aa24.95■■□□□ 1.58
LITAF-212ENST00000573332 LRRC7Q96NW7 1537 aa24.95■■□□□ 1.58
LITAF-212ENST00000573332 CHD2O14647 1828 aaKnown RBP24.95■■□□□ 1.58
LITAF-212ENST00000573332 SETD1AO15047 1707 aaKnown RBP24.94■■□□□ 1.58
LITAF-212ENST00000573332 CFAP70Q5T0N1 1121 aa24.91■■□□□ 1.58
LITAF-212ENST00000573332 PRAG1Q86YV5 1406 aa24.91■■□□□ 1.58
LITAF-212ENST00000573332 PROSER2Q86WR7 435 aaPredicted RBP24.9■■□□□ 1.58
LITAF-212ENST00000573332 NCOA3Q9Y6Q9 1424 aa24.88■■□□□ 1.57
LITAF-212ENST00000573332 LAMC1P11047 1609 aa24.88■■□□□ 1.57
LITAF-212ENST00000573332 CCER1Q8TC90 406 aaPredicted RBP24.88■■□□□ 1.57
LITAF-212ENST00000573332 XRN1Q8IZH2 1706 aaKnown RBP24.88■■□□□ 1.57
LITAF-212ENST00000573332 TMEM94Q12767 1356 aa24.87■■□□□ 1.57
LITAF-212ENST00000573332 TONSLQ96HA7 1378 aa24.87■■□□□ 1.57
LITAF-212ENST00000573332 LRPPRCP42704 1394 aaKnown RBP24.86■■□□□ 1.57
LITAF-212ENST00000573332 ASXL1Q8IXJ9 1541 aa24.86■■□□□ 1.57
LITAF-212ENST00000573332 ABCC11Q96J66 1382 aa24.85■■□□□ 1.57
LITAF-212ENST00000573332 TMEM132EQ6IEE7 984 aa24.85■■□□□ 1.57
LITAF-212ENST00000573332 TIMELESSQ9UNS1 1208 aa24.84■■□□□ 1.57
LITAF-212ENST00000573332 TECPR2O15040 1411 aa24.84■■□□□ 1.57
LITAF-212ENST00000573332 PTCH1Q13635 1447 aa24.84■■□□□ 1.57
LITAF-212ENST00000573332 ADGRB1O14514 1584 aa24.82■■□□□ 1.56
LITAF-212ENST00000573332 YTHDC2Q9H6S0 1430 aaKnown RBP24.82■■□□□ 1.56
LITAF-212ENST00000573332 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
LITAF-212ENST00000573332 ROBO2Q9HCK4 1378 aa24.8■■□□□ 1.56
LITAF-212ENST00000573332 RBM33Q96EV2 1170 aaKnown RBP24.78■■□□□ 1.56
LITAF-212ENST00000573332 KIAA1210Q9ULL0 1709 aa24.78■■□□□ 1.56
LITAF-212ENST00000573332 FBXO41Q8TF61 875 aa24.77■■□□□ 1.56
LITAF-212ENST00000573332 STK26Q9P289 416 aa24.77■■□□□ 1.56
LITAF-212ENST00000573332 XIRP1Q702N8 1843 aaKnown RBP24.77■■□□□ 1.56
LITAF-212ENST00000573332 C19orf44Q9H6X5 657 aa24.75■■□□□ 1.55
LITAF-212ENST00000573332 FAM135BQ49AJ0 1406 aa24.75■■□□□ 1.55
LITAF-212ENST00000573332 TOM1O60784 492 aa24.74■■□□□ 1.55
LITAF-212ENST00000573332 NBPF8Q3BBV2 869 aa24.74■■□□□ 1.55
LITAF-212ENST00000573332 MSH6P52701 1360 aa24.74■■□□□ 1.55
LITAF-212ENST00000573332 KNDC1Q76NI1 1749 aa24.74■■□□□ 1.55
LITAF-212ENST00000573332 NBPF1Q3BBV0 1214 aa24.73■■□□□ 1.55
LITAF-212ENST00000573332 DLC1Q96QB1 1528 aa24.72■■□□□ 1.55
LITAF-212ENST00000573332 UBAP1LF5GYI3 381 aa24.72■■□□□ 1.55
LITAF-212ENST00000573332 ADGRL3Q9HAR2 1447 aa24.7■■□□□ 1.55
LITAF-212ENST00000573332 C14orf37Q86TY3 774 aa24.7■■□□□ 1.54
LITAF-212ENST00000573332 DCCP43146 1447 aa24.69■■□□□ 1.54
LITAF-212ENST00000573332 WAPLQ7Z5K2 1190 aa24.69■■□□□ 1.54
LITAF-212ENST00000573332 TRAK1Q9UPV9 953 aa24.68■■□□□ 1.54
LITAF-212ENST00000573332 TRPM1Q7Z4N2 1603 aa24.68■■□□□ 1.54
LITAF-212ENST00000573332 CADPS2Q86UW7 1296 aa24.67■■□□□ 1.54
LITAF-212ENST00000573332 GPRASP1Q5JY77 1395 aa24.67■■□□□ 1.54
LITAF-212ENST00000573332 PLEKHH1Q9ULM0 1364 aa24.67■■□□□ 1.54
LITAF-212ENST00000573332 PRAM1Q96QH2 718 aa24.65■■□□□ 1.54
LITAF-212ENST00000573332 ROCK2O75116 1388 aaKnown RBP24.65■■□□□ 1.54
LITAF-212ENST00000573332 ATF3P18847 181 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms