RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 USP47Q96K76 1375 aa13.49□□□□□ -0.25
CHRNB1-205ENST00000573209 LETM1O95202 739 aaPredicted RBP13.48□□□□□ -0.25
CHRNB1-205ENST00000573209 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
CHRNB1-205ENST00000573209 GTPBP4Q9BZE4 634 aaKnown RBP13.48□□□□□ -0.25
CHRNB1-205ENST00000573209 CFDP1Q9UEE9 299 aaPredicted RBP13.47□□□□□ -0.25
CHRNB1-205ENST00000573209 ABCA8O94911 1581 aa13.46□□□□□ -0.25
CHRNB1-205ENST00000573209 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
CHRNB1-205ENST00000573209 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
CHRNB1-205ENST00000573209 CARMIL2Q6F5E8 1435 aa13.46□□□□□ -0.25
CHRNB1-205ENST00000573209 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.26
CHRNB1-205ENST00000573209 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
CHRNB1-205ENST00000573209 MS4A1P11836 297 aa13.45□□□□□ -0.26
CHRNB1-205ENST00000573209 JPH4Q96JJ6 628 aa13.45□□□□□ -0.26
CHRNB1-205ENST00000573209 ESPNB1AK53 854 aa13.45□□□□□ -0.26
CHRNB1-205ENST00000573209 PTMAP06454 111 aaKnown RBP13.45□□□□□ -0.26
CHRNB1-205ENST00000573209 DNTTIP2Q5QJE6 756 aaKnown RBP13.45□□□□□ -0.26
CHRNB1-205ENST00000573209 ERCC6L2Q5T890 1561 aa13.45□□□□□ -0.26
CHRNB1-205ENST00000573209 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
CHRNB1-205ENST00000573209 ABCC10Q5T3U5 1492 aa13.44□□□□□ -0.26
CHRNB1-205ENST00000573209 PDE4AP27815 886 aa13.44□□□□□ -0.26
CHRNB1-205ENST00000573209 AXDND1Q5T1B0 1012 aaPredicted RBP13.44□□□□□ -0.26
CHRNB1-205ENST00000573209 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
CHRNB1-205ENST00000573209 KIAA1211Q6ZU35 1233 aa13.43□□□□□ -0.26
CHRNB1-205ENST00000573209 KTN1Q86UP2 1357 aaKnown RBP13.43□□□□□ -0.26
CHRNB1-205ENST00000573209 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.26
CHRNB1-205ENST00000573209 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
CHRNB1-205ENST00000573209 ZSCAN20P17040 1043 aaPredicted RBP13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 PTMSP20962 102 aa13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 SLC20A2Q08357 652 aa13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 C9orf84Q5VXU9 1444 aa13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 FAM193AP78312 1265 aa13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 GRIPAP1Q4V328 841 aa13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
CHRNB1-205ENST00000573209 PTPRGP23470 1445 aa13.41□□□□□ -0.26
CHRNB1-205ENST00000573209 RNF123Q5XPI4 1314 aa13.41□□□□□ -0.26
CHRNB1-205ENST00000573209 HDAC5Q9UQL6 1122 aa13.41□□□□□ -0.26
CHRNB1-205ENST00000573209 GOLGA6L3A6NEY3 463 aa13.4□□□□□ -0.26
CHRNB1-205ENST00000573209 POLR3GLQ9BT43 218 aa13.4□□□□□ -0.26
CHRNB1-205ENST00000573209 PKD2Q13563 968 aa13.4□□□□□ -0.26
CHRNB1-205ENST00000573209 NUDCQ9Y266 331 aa13.4□□□□□ -0.26
CHRNB1-205ENST00000573209 LAMC1P11047 1609 aa13.4□□□□□ -0.26
CHRNB1-205ENST00000573209 PREX2Q70Z35 1606 aa13.4□□□□□ -0.26
CHRNB1-205ENST00000573209 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
CHRNB1-205ENST00000573209 TICAM2Q86XR7 235 aa13.39□□□□□ -0.27
CHRNB1-205ENST00000573209 PRDM10Q9NQV6 1147 aa13.39□□□□□ -0.27
CHRNB1-205ENST00000573209 RIPK4P57078 832 aa13.39□□□□□ -0.27
CHRNB1-205ENST00000573209 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
CHRNB1-205ENST00000573209 CCDC9Q9Y3X0 531 aaKnown RBP13.38□□□□□ -0.27
CHRNB1-205ENST00000573209 RIMBP3CA6NJZ7 1639 aa13.38□□□□□ -0.27
CHRNB1-205ENST00000573209 RIMBP3BA6NNM3 1639 aa13.38□□□□□ -0.27
CHRNB1-205ENST00000573209 RIMBP3Q9UFD9 1639 aa13.38□□□□□ -0.27
CHRNB1-205ENST00000573209 CDC42BPBQ9Y5S2 1711 aa13.38□□□□□ -0.27
CHRNB1-205ENST00000573209 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRNB1-205ENST00000573209 UNC13BO14795 1591 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 FAM13BQ9NYF5 915 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 POGKQ9P215 609 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 MAST1Q9Y2H9 1570 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 FSD2A1L4K1 749 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 APPP05067 770 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 NUP155O75694 1391 aa13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 LRPPRCP42704 1394 aaKnown RBP13.36□□□□□ -0.27
CHRNB1-205ENST00000573209 ARID3AQ99856 593 aa13.35□□□□□ -0.27
CHRNB1-205ENST00000573209 CCDC94Q9BW85 323 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-205ENST00000573209 ATP10BO94823 1461 aa13.35□□□□□ -0.27
CHRNB1-205ENST00000573209 PSEN1P49768 467 aa13.35□□□□□ -0.27
CHRNB1-205ENST00000573209 DNAJC2Q99543 621 aaKnown RBP13.35□□□□□ -0.27
CHRNB1-205ENST00000573209 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-205ENST00000573209 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-205ENST00000573209 SAMD9LQ8IVG5 1584 aa13.34□□□□□ -0.27
CHRNB1-205ENST00000573209 CCDC141Q6ZP82 1450 aa13.34□□□□□ -0.27
CHRNB1-205ENST00000573209 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.27
CHRNB1-205ENST00000573209 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
CHRNB1-205ENST00000573209 EIF2AK4Q9P2K8 1649 aaKnown RBP13.33□□□□□ -0.28
CHRNB1-205ENST00000573209 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
CHRNB1-205ENST00000573209 OFD1O75665 1012 aa13.32□□□□□ -0.28
CHRNB1-205ENST00000573209 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
CHRNB1-205ENST00000573209 PATL2C9JE40 543 aaKnown RBP13.32□□□□□ -0.28
CHRNB1-205ENST00000573209 RALBP1Q15311 655 aa13.32□□□□□ -0.28
CHRNB1-205ENST00000573209 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
CHRNB1-205ENST00000573209 ZMYM4Q5VZL5 1548 aa13.32□□□□□ -0.28
CHRNB1-205ENST00000573209 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 MCCP23508 829 aa13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 MAPK8IP2Q13387 824 aaPredicted RBP13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 PLXNC1O60486 1568 aa13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 YY1AP1Q9H869 796 aa13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
CHRNB1-205ENST00000573209 MRE11P49959 708 aa13.3□□□□□ -0.28
CHRNB1-205ENST00000573209 TMC1Q8TDI8 760 aa13.3□□□□□ -0.28
CHRNB1-205ENST00000573209 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
CHRNB1-205ENST00000573209 TSPY4P0CV99 314 aa13.29□□□□□ -0.28
CHRNB1-205ENST00000573209 TSPY10P0CW01 314 aa13.29□□□□□ -0.28
CHRNB1-205ENST00000573209 MYH16Q9H6N6 1097 aa13.29□□□□□ -0.28
CHRNB1-205ENST00000573209 PRDM15P57071 1507 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms