RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
TSR1-202ENST00000571806 BCANQ96GW7 911 aa23.9■■□□□ 1.42
TSR1-202ENST00000571806 UNC13BO14795 1591 aa23.9■■□□□ 1.42
TSR1-202ENST00000571806 PLEKHG1Q9ULL1 1385 aa23.88■■□□□ 1.41
TSR1-202ENST00000571806 NWD1Q149M9 1564 aa23.87■■□□□ 1.41
TSR1-202ENST00000571806 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
TSR1-202ENST00000571806 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.87■■□□□ 1.41
TSR1-202ENST00000571806 SENP3Q9H4L4 574 aaPredicted RBP23.87■■□□□ 1.41
TSR1-202ENST00000571806 PPP1R15AO75807 674 aaPredicted RBP23.86■■□□□ 1.41
TSR1-202ENST00000571806 TMEM131LA2VDJ0 1609 aa23.84■■□□□ 1.41
TSR1-202ENST00000571806 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
TSR1-202ENST00000571806 MSH6P52701 1360 aa23.82■■□□□ 1.4
TSR1-202ENST00000571806 TBX22Q9Y458 520 aa23.82■■□□□ 1.4
TSR1-202ENST00000571806 IQGAP3Q86VI3 1631 aa23.81■■□□□ 1.4
TSR1-202ENST00000571806 MYO5BQ9ULV0 1848 aa23.81■■□□□ 1.4
TSR1-202ENST00000571806 E9PCH4 1651 aa23.8■■□□□ 1.4
TSR1-202ENST00000571806 CHD2O14647 1828 aaKnown RBP23.8■■□□□ 1.4
TSR1-202ENST00000571806 NCOA3Q9Y6Q9 1424 aa23.79■■□□□ 1.4
TSR1-202ENST00000571806 CHGAP10645 457 aaKnown RBP23.78■■□□□ 1.4
TSR1-202ENST00000571806 ROBO1Q9Y6N7 1651 aa23.78■■□□□ 1.4
TSR1-202ENST00000571806 NUP155O75694 1391 aa23.78■■□□□ 1.4
TSR1-202ENST00000571806 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
TSR1-202ENST00000571806 SLAIN2Q9P270 581 aa23.76■■□□□ 1.39
TSR1-202ENST00000571806 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
TSR1-202ENST00000571806 PIK3R4Q99570 1358 aa23.75■■□□□ 1.39
TSR1-202ENST00000571806 ITGAEP38570 1179 aa23.71■■□□□ 1.39
TSR1-202ENST00000571806 ADAMTS13Q76LX8 1427 aa23.69■■□□□ 1.38
TSR1-202ENST00000571806 RGS17Q9UGC6 210 aaPredicted RBP23.68■■□□□ 1.38
TSR1-202ENST00000571806 C14orf37Q86TY3 774 aa23.67■■□□□ 1.38
TSR1-202ENST00000571806 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
TSR1-202ENST00000571806 TRPM2O94759 1503 aa23.66■■□□□ 1.38
TSR1-202ENST00000571806 CADPS2Q86UW7 1296 aa23.66■■□□□ 1.38
TSR1-202ENST00000571806 PHLPP1O60346 1717 aa23.65■■□□□ 1.38
TSR1-202ENST00000571806 NUTM2DQ5VT03 806 aaPredicted RBP23.65■■□□□ 1.38
TSR1-202ENST00000571806 JCADQ9P266 1359 aa23.65■■□□□ 1.38
TSR1-202ENST00000571806 ATF3P18847 181 aa23.63■■□□□ 1.37
TSR1-202ENST00000571806 SPHKAPQ2M3C7 1700 aa23.62■■□□□ 1.37
TSR1-202ENST00000571806 AMOTL2Q9Y2J4 779 aa23.62■■□□□ 1.37
TSR1-202ENST00000571806 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.59■■□□□ 1.37
TSR1-202ENST00000571806 PPARGC1BQ86YN6 1023 aaKnown RBP23.59■■□□□ 1.37
TSR1-202ENST00000571806 ZNF326Q5BKZ1 582 aaKnown RBP23.58■■□□□ 1.37
TSR1-202ENST00000571806 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
TSR1-202ENST00000571806 RRBP1Q9P2E9 1410 aaKnown RBP23.57■■□□□ 1.36
TSR1-202ENST00000571806 SPATA31A6Q5VVP1 1343 aa23.57■■□□□ 1.36
TSR1-202ENST00000571806 DCCP43146 1447 aa23.56■■□□□ 1.36
TSR1-202ENST00000571806 COL16A1Q07092 1604 aaPredicted RBP23.55■■□□□ 1.36
TSR1-202ENST00000571806 POTEAQ6S8J7 498 aa23.55■■□□□ 1.36
TSR1-202ENST00000571806 PTPRUQ92729 1446 aa23.54■■□□□ 1.36
TSR1-202ENST00000571806 AHDC1Q5TGY3 1603 aaPredicted RBP23.53■■□□□ 1.36
TSR1-202ENST00000571806 NRXN3Q9Y4C0 1643 aa23.52■■□□□ 1.36
TSR1-202ENST00000571806 NAIPQ13075 1403 aa23.5■■□□□ 1.35
TSR1-202ENST00000571806 XRN1Q8IZH2 1706 aaKnown RBP23.5■■□□□ 1.35
TSR1-202ENST00000571806 KIF1BO60333 1816 aa23.48■■□□□ 1.35
TSR1-202ENST00000571806 CLTCL1P53675 1640 aa23.48■■□□□ 1.35
TSR1-202ENST00000571806 BRINP3Q76B58 766 aa23.47■■□□□ 1.35
TSR1-202ENST00000571806 METP08581 1390 aa23.47■■□□□ 1.35
TSR1-202ENST00000571806 SHPRHQ149N8 1683 aa23.47■■□□□ 1.35
TSR1-202ENST00000571806 VGFO15240 615 aaPredicted RBP23.46■■□□□ 1.35
TSR1-202ENST00000571806 NEXMIFQ5QGS0 1516 aa23.46■■□□□ 1.35
TSR1-202ENST00000571806 MEX3CQ5U5Q3 659 aaKnown RBP23.45■■□□□ 1.34
TSR1-202ENST00000571806 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
TSR1-202ENST00000571806 HFM1A2PYH4 1435 aa23.43■■□□□ 1.34
TSR1-202ENST00000571806 RPGRIP1LQ68CZ1 1315 aa23.42■■□□□ 1.34
TSR1-202ENST00000571806 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
TSR1-202ENST00000571806 MST1RQ04912 1400 aa23.42■■□□□ 1.34
TSR1-202ENST00000571806 ASXL1Q8IXJ9 1541 aa23.41■■□□□ 1.34
TSR1-202ENST00000571806 ADGRL3Q9HAR2 1447 aa23.41■■□□□ 1.34
TSR1-202ENST00000571806 LRP6O75581 1613 aa23.41■■□□□ 1.34
TSR1-202ENST00000571806 LRRC59Q96AG4 307 aaKnown RBP23.4■■□□□ 1.34
TSR1-202ENST00000571806 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
TSR1-202ENST00000571806 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
TSR1-202ENST00000571806 NHSL1Q5SYE7 1610 aa23.37■■□□□ 1.33
TSR1-202ENST00000571806 PTCH1Q13635 1447 aa23.35■■□□□ 1.33
TSR1-202ENST00000571806 NALCNQ8IZF0 1738 aa23.33■■□□□ 1.32
TSR1-202ENST00000571806 PRAG1Q86YV5 1406 aa23.33■■□□□ 1.32
TSR1-202ENST00000571806 NUTM2BA6NNL0 878 aaPredicted RBP23.31■■□□□ 1.32
TSR1-202ENST00000571806 NUTM2EB1AL46 878 aaPredicted RBP23.31■■□□□ 1.32
TSR1-202ENST00000571806 NUTM2AQ8IVF1 878 aaPredicted RBP23.31■■□□□ 1.32
TSR1-202ENST00000571806 SETD1AO15047 1707 aaKnown RBP23.3■■□□□ 1.32
TSR1-202ENST00000571806 RXRBP28702 533 aa23.29■■□□□ 1.32
TSR1-202ENST00000571806 PPLO60437 1756 aa23.28■■□□□ 1.32
TSR1-202ENST00000571806 C1orf167Q5SNV9 1468 aa23.28■■□□□ 1.32
TSR1-202ENST00000571806 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
TSR1-202ENST00000571806 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
TSR1-202ENST00000571806 CDK12Q9NYV4 1490 aaPredicted RBP23.26■■□□□ 1.31
TSR1-202ENST00000571806 LAMC1P11047 1609 aa23.26■■□□□ 1.31
TSR1-202ENST00000571806 PNPLA6Q8IY17 1366 aa23.25■■□□□ 1.31
TSR1-202ENST00000571806 AFF2P51816 1311 aa23.24■■□□□ 1.31
TSR1-202ENST00000571806 CCDC144AA2RUR9 1427 aa23.24■■□□□ 1.31
TSR1-202ENST00000571806 DDX17Q92841 729 aaKnown RBP23.22■■□□□ 1.31
TSR1-202ENST00000571806 SOS2Q07890 1332 aaPredicted RBP23.21■■□□□ 1.31
TSR1-202ENST00000571806 ANKRD30BQ9BXX2 1392 aa23.21■■□□□ 1.31
TSR1-202ENST00000571806 C8orf37Q96NL8 207 aa23.2■■□□□ 1.3
TSR1-202ENST00000571806 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.3
TSR1-202ENST00000571806 ORAI2Q96SN7 254 aa23.19■■□□□ 1.3
TSR1-202ENST00000571806 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
TSR1-202ENST00000571806 FOXD1Q16676 465 aa23.17■■□□□ 1.3
TSR1-202ENST00000571806 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
TSR1-202ENST00000571806 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
TSR1-202ENST00000571806 SPATA31E1Q6ZUB1 1445 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms