RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 IDI1Q13907 227 aa27.42■■□□□ 1.98
SPNS2-203ENST00000570979 UNC13BO14795 1591 aa27.42■■□□□ 1.98
SPNS2-203ENST00000570979 NUP155O75694 1391 aa27.41■■□□□ 1.98
SPNS2-203ENST00000570979 ARHGAP23Q9P227 1491 aa27.41■■□□□ 1.98
SPNS2-203ENST00000570979 IQGAP1P46940 1657 aa27.4■■□□□ 1.98
SPNS2-203ENST00000570979 LTKP29376 864 aa27.4■■□□□ 1.98
SPNS2-203ENST00000570979 SLIT1O75093 1534 aa27.39■■□□□ 1.97
SPNS2-203ENST00000570979 TET3O43151 1660 aa27.38■■□□□ 1.97
SPNS2-203ENST00000570979 SCAF11Q99590 1463 aaKnown RBP27.37■■□□□ 1.97
SPNS2-203ENST00000570979 FOXD1Q16676 465 aa27.37■■□□□ 1.97
SPNS2-203ENST00000570979 ANP32CO43423 234 aa27.35■■□□□ 1.97
SPNS2-203ENST00000570979 TXNDC2Q86VQ3 553 aa27.35■■□□□ 1.97
SPNS2-203ENST00000570979 CCER2I3L3R5 266 aa27.34■■□□□ 1.97
SPNS2-203ENST00000570979 STAG3Q9UJ98 1225 aa27.34■■□□□ 1.97
SPNS2-203ENST00000570979 TMEM2Q9UHN6 1383 aa27.34■■□□□ 1.97
SPNS2-203ENST00000570979 KDM5AP29375 1690 aaKnown RBP27.31■■□□□ 1.96
SPNS2-203ENST00000570979 CPS1P31327 1500 aa27.31■■□□□ 1.96
SPNS2-203ENST00000570979 IQGAP3Q86VI3 1631 aa27.31■■□□□ 1.96
SPNS2-203ENST00000570979 STRCP1A6NGW2 1772 aa27.31■■□□□ 1.96
SPNS2-203ENST00000570979 E9PCH4 1651 aa27.3■■□□□ 1.96
SPNS2-203ENST00000570979 ADGRB3O60242 1522 aa27.29■■□□□ 1.96
SPNS2-203ENST00000570979 UBAP1LF5GYI3 381 aa27.29■■□□□ 1.96
SPNS2-203ENST00000570979 SLC52A1Q9NWF4 448 aa27.29■■□□□ 1.96
SPNS2-203ENST00000570979 HSPA5P11021 654 aaKnown RBP27.28■■□□□ 1.96
SPNS2-203ENST00000570979 EID1Q9Y6B2 187 aa27.28■■□□□ 1.96
SPNS2-203ENST00000570979 GTF3C3Q9Y5Q9 886 aa27.26■■□□□ 1.95
SPNS2-203ENST00000570979 MYO5BQ9ULV0 1848 aa27.24■■□□□ 1.95
SPNS2-203ENST00000570979 HIRIP3Q9BW71 556 aaPredicted RBP27.23■■□□□ 1.95
SPNS2-203ENST00000570979 TMEM131LA2VDJ0 1609 aa27.19■■□□□ 1.94
SPNS2-203ENST00000570979 LRRC7Q96NW7 1537 aa27.19■■□□□ 1.94
SPNS2-203ENST00000570979 NBPF8Q3BBV2 869 aa27.17■■□□□ 1.94
SPNS2-203ENST00000570979 ZFYVE9O95405 1425 aa27.16■■□□□ 1.94
SPNS2-203ENST00000570979 SLC26A8Q96RN1 970 aa27.15■■□□□ 1.94
SPNS2-203ENST00000570979 SENP3Q9H4L4 574 aaPredicted RBP27.15■■□□□ 1.94
SPNS2-203ENST00000570979 CHGAP10645 457 aaKnown RBP27.14■■□□□ 1.94
SPNS2-203ENST00000570979 ALKQ9UM73 1620 aa27.14■■□□□ 1.93
SPNS2-203ENST00000570979 RIMS2Q9UQ26 1411 aa27.13■■□□□ 1.93
SPNS2-203ENST00000570979 SPATA31E1Q6ZUB1 1445 aa27.12■■□□□ 1.93
SPNS2-203ENST00000570979 PIP4K2BP78356 416 aa27.12■■□□□ 1.93
SPNS2-203ENST00000570979 WASHC2AQ641Q2 1341 aa27.11■■□□□ 1.93
SPNS2-203ENST00000570979 TOM1O60784 492 aa27.1■■□□□ 1.93
SPNS2-203ENST00000570979 CCDC144AA2RUR9 1427 aa27.1■■□□□ 1.93
SPNS2-203ENST00000570979 CCDC7Q96M83 1385 aa27.08■■□□□ 1.93
SPNS2-203ENST00000570979 XIRP1Q702N8 1843 aaKnown RBP27.07■■□□□ 1.92
SPNS2-203ENST00000570979 NUTM2DQ5VT03 806 aaPredicted RBP27.07■■□□□ 1.92
SPNS2-203ENST00000570979 SPHKAPQ2M3C7 1700 aa27.07■■□□□ 1.92
SPNS2-203ENST00000570979 RALGAPBQ86X10 1494 aa27.07■■□□□ 1.92
SPNS2-203ENST00000570979 PLEKHG1Q9ULL1 1385 aa27.06■■□□□ 1.92
SPNS2-203ENST00000570979 BCANQ96GW7 911 aa27.06■■□□□ 1.92
SPNS2-203ENST00000570979 KCNA6P17658 529 aa27.04■■□□□ 1.92
SPNS2-203ENST00000570979 HSPA1LP34931 641 aa27.02■■□□□ 1.92
SPNS2-203ENST00000570979 HDGFP51858 240 aaKnown RBP27.01■■□□□ 1.91
SPNS2-203ENST00000570979 ABCF1Q8NE71 845 aaKnown RBP eCLIP27■■□□□ 1.91
SPNS2-203ENST00000570979 RBM33Q96EV2 1170 aaKnown RBP27■■□□□ 1.91
SPNS2-203ENST00000570979 USP47Q96K76 1375 aa27■■□□□ 1.91
SPNS2-203ENST00000570979 STAC3Q96MF2 364 aa26.99■■□□□ 1.91
SPNS2-203ENST00000570979 TMEM94Q12767 1356 aa26.98■■□□□ 1.91
SPNS2-203ENST00000570979 NWD1Q149M9 1564 aa26.98■■□□□ 1.91
SPNS2-203ENST00000570979 CLTCL1P53675 1640 aa26.97■■□□□ 1.91
SPNS2-203ENST00000570979 ROCK2O75116 1388 aaKnown RBP26.97■■□□□ 1.91
SPNS2-203ENST00000570979 ADAMTS13Q76LX8 1427 aa26.97■■□□□ 1.91
SPNS2-203ENST00000570979 PROSER2Q86WR7 435 aaPredicted RBP26.97■■□□□ 1.91
SPNS2-203ENST00000570979 TRPM2O94759 1503 aa26.95■■□□□ 1.91
SPNS2-203ENST00000570979 DCAF11Q8TEB1 546 aa26.95■■□□□ 1.9
SPNS2-203ENST00000570979 TBX22Q9Y458 520 aa26.95■■□□□ 1.9
SPNS2-203ENST00000570979 DISP3Q9P2K9 1392 aa26.95■■□□□ 1.9
SPNS2-203ENST00000570979 CHD2O14647 1828 aaKnown RBP26.95■■□□□ 1.9
SPNS2-203ENST00000570979 ZNF326Q5BKZ1 582 aaKnown RBP26.94■■□□□ 1.9
SPNS2-203ENST00000570979 CARD11Q9BXL7 1154 aa26.94■■□□□ 1.9
SPNS2-203ENST00000570979 NKTRP30414 1462 aaKnown RBP26.92■■□□□ 1.9
SPNS2-203ENST00000570979 KIF7Q2M1P5 1343 aa26.92■■□□□ 1.9
SPNS2-203ENST00000570979 DIP2AQ14689 1571 aa26.87■■□□□ 1.89
SPNS2-203ENST00000570979 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
SPNS2-203ENST00000570979 C11orf95C9JLR9 678 aaPredicted RBP26.86■■□□□ 1.89
SPNS2-203ENST00000570979 PRAG1Q86YV5 1406 aa26.86■■□□□ 1.89
SPNS2-203ENST00000570979 KDM2AQ9Y2K7 1162 aa26.86■■□□□ 1.89
SPNS2-203ENST00000570979 KIF1BO60333 1816 aa26.85■■□□□ 1.89
SPNS2-203ENST00000570979 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
SPNS2-203ENST00000570979 LAMC1P11047 1609 aa26.84■■□□□ 1.89
SPNS2-203ENST00000570979 PTPRUQ92729 1446 aa26.84■■□□□ 1.89
SPNS2-203ENST00000570979 SETBP1Q9Y6X0 1596 aa26.82■■□□□ 1.88
SPNS2-203ENST00000570979 ILDR2Q71H61 639 aa26.82■■□□□ 1.88
SPNS2-203ENST00000570979 PRKRIP1Q9H875 184 aaPredicted RBP26.82■■□□□ 1.88
SPNS2-203ENST00000570979 GPRASP1Q5JY77 1395 aa26.82■■□□□ 1.88
SPNS2-203ENST00000570979 PIK3R4Q99570 1358 aa26.81■■□□□ 1.88
SPNS2-203ENST00000570979 TRPM1Q7Z4N2 1603 aa26.8■■□□□ 1.88
SPNS2-203ENST00000570979 AMOTL2Q9Y2J4 779 aa26.79■■□□□ 1.88
SPNS2-203ENST00000570979 MSH6P52701 1360 aa26.78■■□□□ 1.88
SPNS2-203ENST00000570979 FAM135BQ49AJ0 1406 aa26.78■■□□□ 1.88
SPNS2-203ENST00000570979 METP08581 1390 aa26.77■■□□□ 1.88
SPNS2-203ENST00000570979 RGL3Q3MIN7 710 aa26.75■■□□□ 1.87
SPNS2-203ENST00000570979 MED1Q15648 1581 aaPredicted RBP26.74■■□□□ 1.87
SPNS2-203ENST00000570979 KTN1Q86UP2 1357 aaKnown RBP26.74■■□□□ 1.87
SPNS2-203ENST00000570979 ROBO1Q9Y6N7 1651 aa26.74■■□□□ 1.87
SPNS2-203ENST00000570979 XRN1Q8IZH2 1706 aaKnown RBP26.73■■□□□ 1.87
SPNS2-203ENST00000570979 NCOA3Q9Y6Q9 1424 aa26.72■■□□□ 1.87
SPNS2-203ENST00000570979 ST20-MTHFSA0A0A6YYL1 179 aa26.71■■□□□ 1.87
SPNS2-203ENST00000570979 SLAIN2Q9P270 581 aa26.71■■□□□ 1.87
SPNS2-203ENST00000570979 C14orf37Q86TY3 774 aa26.7■■□□□ 1.86
SPNS2-203ENST00000570979 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms