RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 SIGLEC1Q9BZZ2 1709 aa9.89□□□□□ -0.83
TOM1L1-208ENST00000570977 PRXQ9BXM0 1461 aa9.89□□□□□ -0.83
TOM1L1-208ENST00000570977 PREX1Q8TCU6 1659 aa9.88□□□□□ -0.83
TOM1L1-208ENST00000570977 CTTNBP2Q8WZ74 1663 aa9.88□□□□□ -0.83
TOM1L1-208ENST00000570977 ATP10AO60312 1499 aa9.88□□□□□ -0.83
TOM1L1-208ENST00000570977 BCANQ96GW7 911 aa9.88□□□□□ -0.83
TOM1L1-208ENST00000570977 UHRF1BP1Q6BDS2 1440 aa9.88□□□□□ -0.83
TOM1L1-208ENST00000570977 SETD1BQ9UPS6 1966 aaKnown RBP9.87□□□□□ -0.83
TOM1L1-208ENST00000570977 POTEMA6NI47 508 aa9.87□□□□□ -0.83
TOM1L1-208ENST00000570977 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
TOM1L1-208ENST00000570977 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
TOM1L1-208ENST00000570977 POTEGQ6S5H5 508 aa9.86□□□□□ -0.83
TOM1L1-208ENST00000570977 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
TOM1L1-208ENST00000570977 NUP153P49790 1475 aaKnown RBP9.85□□□□□ -0.83
TOM1L1-208ENST00000570977 MARVELD3Q96A59 401 aa9.85□□□□□ -0.83
TOM1L1-208ENST00000570977 TIMELESSQ9UNS1 1208 aa9.85□□□□□ -0.83
TOM1L1-208ENST00000570977 FER1L4A9Z1Z3 1794 aa9.85□□□□□ -0.83
TOM1L1-208ENST00000570977 HECW1Q76N89 1606 aa9.85□□□□□ -0.83
TOM1L1-208ENST00000570977 C9orf84Q5VXU9 1444 aa9.84□□□□□ -0.83
TOM1L1-208ENST00000570977 SCAPERQ9BY12 1400 aa9.84□□□□□ -0.83
TOM1L1-208ENST00000570977 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
TOM1L1-208ENST00000570977 CFAP74Q9C0B2 1584 aa9.84□□□□□ -0.83
TOM1L1-208ENST00000570977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.83□□□□□ -0.84
TOM1L1-208ENST00000570977 RAPGEF6Q8TEU7 1601 aa9.83□□□□□ -0.84
TOM1L1-208ENST00000570977 GPHNQ9NQX3 736 aaPredicted RBP9.83□□□□□ -0.84
TOM1L1-208ENST00000570977 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
TOM1L1-208ENST00000570977 PLCH2O75038 1416 aa9.82□□□□□ -0.84
TOM1L1-208ENST00000570977 UBAP1LF5GYI3 381 aa9.82□□□□□ -0.84
TOM1L1-208ENST00000570977 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
TOM1L1-208ENST00000570977 DSG2Q14126 1118 aa9.82□□□□□ -0.84
TOM1L1-208ENST00000570977 NCOA1Q15788 1441 aa9.82□□□□□ -0.84
TOM1L1-208ENST00000570977 TRAPPC8Q9Y2L5 1435 aa9.82□□□□□ -0.84
TOM1L1-208ENST00000570977 CRISPLD2Q9H0B8 497 aa9.81□□□□□ -0.84
TOM1L1-208ENST00000570977 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
TOM1L1-208ENST00000570977 EMP3P54852 163 aa9.8□□□□□ -0.84
TOM1L1-208ENST00000570977 PLPP6Q8IY26 295 aa9.8□□□□□ -0.84
TOM1L1-208ENST00000570977 FOXK1P85037 733 aa9.79□□□□□ -0.84
TOM1L1-208ENST00000570977 EFCAB2Q5VUJ9 269 aa9.79□□□□□ -0.84
TOM1L1-208ENST00000570977 PDE4AP27815 886 aa9.78□□□□□ -0.84
TOM1L1-208ENST00000570977 AFAP1Q8N556 730 aa9.78□□□□□ -0.84
TOM1L1-208ENST00000570977 KHSRPQ92945 711 aaKnown RBP eCLIP9.78□□□□□ -0.84
TOM1L1-208ENST00000570977 LARP6Q9BRS8 491 aaKnown RBP9.78□□□□□ -0.84
TOM1L1-208ENST00000570977 ZNF335Q9H4Z2 1342 aaPredicted RBP9.78□□□□□ -0.84
TOM1L1-208ENST00000570977 ARSIQ5FYB1 569 aa9.77□□□□□ -0.85
TOM1L1-208ENST00000570977 PPP1R15BQ5SWA1 713 aa9.77□□□□□ -0.85
TOM1L1-208ENST00000570977 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
TOM1L1-208ENST00000570977 HSPA1LP34931 641 aa9.76□□□□□ -0.85
TOM1L1-208ENST00000570977 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
TOM1L1-208ENST00000570977 ESF1Q9H501 851 aaKnown RBP9.75□□□□□ -0.85
TOM1L1-208ENST00000570977 REREQ9P2R6 1566 aa9.75□□□□□ -0.85
TOM1L1-208ENST00000570977 ZNF518AQ6AHZ1 1483 aa9.74□□□□□ -0.85
TOM1L1-208ENST00000570977 AGLP35573 1532 aa9.74□□□□□ -0.85
TOM1L1-208ENST00000570977 FAM205CA6NFA0 338 aa9.74□□□□□ -0.85
TOM1L1-208ENST00000570977 TULP1O00294 542 aaPredicted RBP9.74□□□□□ -0.85
TOM1L1-208ENST00000570977 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
TOM1L1-208ENST00000570977 ZSWIM6Q9HCJ5 1215 aa9.74□□□□□ -0.85
TOM1L1-208ENST00000570977 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
TOM1L1-208ENST00000570977 NPATQ14207 1427 aa9.73□□□□□ -0.85
TOM1L1-208ENST00000570977 CNTLNQ9NXG0 1405 aa9.73□□□□□ -0.85
TOM1L1-208ENST00000570977 MED1Q15648 1581 aaPredicted RBP9.73□□□□□ -0.85
TOM1L1-208ENST00000570977 UPF1Q92900 1129 aaKnown RBP eCLIP9.73□□□□□ -0.85
TOM1L1-208ENST00000570977 PCDHGA4Q9Y5G9 962 aa9.73□□□□□ -0.85
TOM1L1-208ENST00000570977 C3P01024 1663 aa9.73□□□□□ -0.85
TOM1L1-208ENST00000570977 MLH3Q9UHC1 1453 aa9.72□□□□□ -0.85
TOM1L1-208ENST00000570977 KDM5CP41229 1560 aa9.72□□□□□ -0.85
TOM1L1-208ENST00000570977 CAMSAP1Q5T5Y3 1602 aa9.72□□□□□ -0.85
TOM1L1-208ENST00000570977 TOM1O60784 492 aa9.72□□□□□ -0.85
TOM1L1-208ENST00000570977 NUDT7P0C024 238 aa9.71□□□□□ -0.86
TOM1L1-208ENST00000570977 ZMYM3Q14202 1370 aa9.71□□□□□ -0.86
TOM1L1-208ENST00000570977 PLA2R1Q13018 1463 aa9.71□□□□□ -0.86
TOM1L1-208ENST00000570977 SLC34A2O95436 690 aa9.7□□□□□ -0.86
TOM1L1-208ENST00000570977 MFSD10Q14728 455 aa9.7□□□□□ -0.86
TOM1L1-208ENST00000570977 HS3ST6Q96QI5 342 aa9.7□□□□□ -0.86
TOM1L1-208ENST00000570977 ERBB3P21860 1342 aa9.7□□□□□ -0.86
TOM1L1-208ENST00000570977 TCOF1Q13428 1488 aaKnown RBP9.7□□□□□ -0.86
TOM1L1-208ENST00000570977 DIP2CQ9Y2E4 1556 aa9.7□□□□□ -0.86
TOM1L1-208ENST00000570977 POTEB3A0JP26 581 aa9.69□□□□□ -0.86
TOM1L1-208ENST00000570977 POTEBQ6S5H4 581 aa9.69□□□□□ -0.86
TOM1L1-208ENST00000570977 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
TOM1L1-208ENST00000570977 MYT1LQ9UL68 1186 aa9.69□□□□□ -0.86
TOM1L1-208ENST00000570977 CDK11AQ9UQ88 783 aaPredicted RBP9.69□□□□□ -0.86
TOM1L1-208ENST00000570977 PIP4K2BP78356 416 aa9.68□□□□□ -0.86
TOM1L1-208ENST00000570977 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
TOM1L1-208ENST00000570977 CDAN1Q8IWY9 1227 aa9.67□□□□□ -0.86
TOM1L1-208ENST00000570977 CDK13Q14004 1512 aaKnown RBP9.66□□□□□ -0.86
TOM1L1-208ENST00000570977 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
TOM1L1-208ENST00000570977 RGS17Q9UGC6 210 aaPredicted RBP9.65□□□□□ -0.86
TOM1L1-208ENST00000570977 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
TOM1L1-208ENST00000570977 OXER1Q8TDS5 423 aa9.64□□□□□ -0.87
TOM1L1-208ENST00000570977 PTPRKQ15262 1439 aa9.64□□□□□ -0.87
TOM1L1-208ENST00000570977 ABCA6Q8N139 1617 aa9.64□□□□□ -0.87
TOM1L1-208ENST00000570977 CPS1P31327 1500 aa9.63□□□□□ -0.87
TOM1L1-208ENST00000570977 ZNF316A6NFI3 1004 aaPredicted RBP9.63□□□□□ -0.87
TOM1L1-208ENST00000570977 TBC1D12O60347 775 aa9.63□□□□□ -0.87
TOM1L1-208ENST00000570977 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
TOM1L1-208ENST00000570977 LHX6Q9UPM6 363 aa9.63□□□□□ -0.87
TOM1L1-208ENST00000570977 TROQ12816 1431 aaPredicted RBP9.63□□□□□ -0.87
TOM1L1-208ENST00000570977 MYO5CQ9NQX4 1742 aa9.62□□□□□ -0.87
TOM1L1-208ENST00000570977 ARHGAP5Q13017 1502 aa9.62□□□□□ -0.87
TOM1L1-208ENST00000570977 MROH2AA6NES4 1674 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms