RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ZFYVE9O95405 1425 aa22.73■■□□□ 1.23
NDE1-203ENST00000570727 TMEM131LA2VDJ0 1609 aa22.71■■□□□ 1.23
NDE1-203ENST00000570727 PROSER2Q86WR7 435 aaPredicted RBP22.71■■□□□ 1.23
NDE1-203ENST00000570727 RBM33Q96EV2 1170 aaKnown RBP22.71■■□□□ 1.23
NDE1-203ENST00000570727 E9PCH4 1651 aa22.71■■□□□ 1.23
NDE1-203ENST00000570727 ITGAEP38570 1179 aa22.69■■□□□ 1.22
NDE1-203ENST00000570727 BCANQ96GW7 911 aa22.69■■□□□ 1.22
NDE1-203ENST00000570727 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
NDE1-203ENST00000570727 FAM135BQ49AJ0 1406 aa22.67■■□□□ 1.22
NDE1-203ENST00000570727 PLEKHG1Q9ULL1 1385 aa22.67■■□□□ 1.22
NDE1-203ENST00000570727 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
NDE1-203ENST00000570727 IQGAP3Q86VI3 1631 aa22.67■■□□□ 1.22
NDE1-203ENST00000570727 NWD1Q149M9 1564 aa22.66■■□□□ 1.22
NDE1-203ENST00000570727 NUP155O75694 1391 aa22.65■■□□□ 1.22
NDE1-203ENST00000570727 CHGAP10645 457 aaKnown RBP22.65■■□□□ 1.22
NDE1-203ENST00000570727 CHD2O14647 1828 aaKnown RBP22.64■■□□□ 1.22
NDE1-203ENST00000570727 NKTRP30414 1462 aaKnown RBP22.63■■□□□ 1.21
NDE1-203ENST00000570727 PPP1R15AO75807 674 aaPredicted RBP22.63■■□□□ 1.21
NDE1-203ENST00000570727 TBX22Q9Y458 520 aa22.63■■□□□ 1.21
NDE1-203ENST00000570727 NUTM2DQ5VT03 806 aaPredicted RBP22.62■■□□□ 1.21
NDE1-203ENST00000570727 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.62■■□□□ 1.21
NDE1-203ENST00000570727 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
NDE1-203ENST00000570727 ADAMTS13Q76LX8 1427 aa22.58■■□□□ 1.21
NDE1-203ENST00000570727 ROBO1Q9Y6N7 1651 aa22.58■■□□□ 1.2
NDE1-203ENST00000570727 MSH6P52701 1360 aa22.56■■□□□ 1.2
NDE1-203ENST00000570727 SLAIN2Q9P270 581 aa22.56■■□□□ 1.2
NDE1-203ENST00000570727 RGS17Q9UGC6 210 aaPredicted RBP22.56■■□□□ 1.2
NDE1-203ENST00000570727 NCOA3Q9Y6Q9 1424 aa22.51■■□□□ 1.19
NDE1-203ENST00000570727 PIK3R4Q99570 1358 aa22.5■■□□□ 1.19
NDE1-203ENST00000570727 RRBP1Q9P2E9 1410 aaKnown RBP22.5■■□□□ 1.19
NDE1-203ENST00000570727 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
NDE1-203ENST00000570727 DIP2AQ14689 1571 aa22.5■■□□□ 1.19
NDE1-203ENST00000570727 PTPRUQ92729 1446 aa22.48■■□□□ 1.19
NDE1-203ENST00000570727 AMOTL2Q9Y2J4 779 aa22.47■■□□□ 1.19
NDE1-203ENST00000570727 NAIPQ13075 1403 aa22.46■■□□□ 1.19
NDE1-203ENST00000570727 C19orf44Q9H6X5 657 aa22.45■■□□□ 1.18
NDE1-203ENST00000570727 PHLPP1O60346 1717 aa22.45■■□□□ 1.18
NDE1-203ENST00000570727 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.18
NDE1-203ENST00000570727 TRPM2O94759 1503 aa22.44■■□□□ 1.18
NDE1-203ENST00000570727 C14orf37Q86TY3 774 aa22.44■■□□□ 1.18
NDE1-203ENST00000570727 NRXN3Q9Y4C0 1643 aa22.43■■□□□ 1.18
NDE1-203ENST00000570727 ZNF326Q5BKZ1 582 aaKnown RBP22.43■■□□□ 1.18
NDE1-203ENST00000570727 CADPS2Q86UW7 1296 aa22.41■■□□□ 1.18
NDE1-203ENST00000570727 SETBP1Q9Y6X0 1596 aa22.41■■□□□ 1.18
NDE1-203ENST00000570727 CLTCL1P53675 1640 aa22.4■■□□□ 1.18
NDE1-203ENST00000570727 ATF3P18847 181 aa22.4■■□□□ 1.18
NDE1-203ENST00000570727 POTEAQ6S8J7 498 aa22.4■■□□□ 1.18
NDE1-203ENST00000570727 JCADQ9P266 1359 aa22.38■■□□□ 1.17
NDE1-203ENST00000570727 COL16A1Q07092 1604 aaPredicted RBP22.38■■□□□ 1.17
NDE1-203ENST00000570727 METP08581 1390 aa22.38■■□□□ 1.17
NDE1-203ENST00000570727 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
NDE1-203ENST00000570727 NEXMIFQ5QGS0 1516 aa22.36■■□□□ 1.17
NDE1-203ENST00000570727 KIF1BO60333 1816 aa22.35■■□□□ 1.17
NDE1-203ENST00000570727 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
NDE1-203ENST00000570727 HFM1A2PYH4 1435 aa22.33■■□□□ 1.17
NDE1-203ENST00000570727 BRINP3Q76B58 766 aa22.33■■□□□ 1.17
NDE1-203ENST00000570727 AHDC1Q5TGY3 1603 aaPredicted RBP22.32■■□□□ 1.16
NDE1-203ENST00000570727 DCCP43146 1447 aa22.31■■□□□ 1.16
NDE1-203ENST00000570727 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
NDE1-203ENST00000570727 SPATA31A6Q5VVP1 1343 aa22.28■■□□□ 1.16
NDE1-203ENST00000570727 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
NDE1-203ENST00000570727 MST1RQ04912 1400 aa22.26■■□□□ 1.15
NDE1-203ENST00000570727 LRP6O75581 1613 aa22.26■■□□□ 1.15
NDE1-203ENST00000570727 SHPRHQ149N8 1683 aa22.25■■□□□ 1.15
NDE1-203ENST00000570727 RPGRIP1LQ68CZ1 1315 aa22.24■■□□□ 1.15
NDE1-203ENST00000570727 ASXL1Q8IXJ9 1541 aa22.23■■□□□ 1.15
NDE1-203ENST00000570727 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
NDE1-203ENST00000570727 ADGRL3Q9HAR2 1447 aa22.23■■□□□ 1.15
NDE1-203ENST00000570727 FOXD1Q16676 465 aa22.22■■□□□ 1.15
NDE1-203ENST00000570727 NALCNQ8IZF0 1738 aa22.21■■□□□ 1.15
NDE1-203ENST00000570727 NHSL1Q5SYE7 1610 aa22.2■■□□□ 1.14
NDE1-203ENST00000570727 PPLO60437 1756 aa22.2■■□□□ 1.14
NDE1-203ENST00000570727 MEX3CQ5U5Q3 659 aaKnown RBP22.19■■□□□ 1.14
NDE1-203ENST00000570727 DDX17Q92841 729 aaKnown RBP22.19■■□□□ 1.14
NDE1-203ENST00000570727 SETD5Q9C0A6 1442 aa22.19■■□□□ 1.14
NDE1-203ENST00000570727 ROBO2Q9HCK4 1378 aa22.18■■□□□ 1.14
NDE1-203ENST00000570727 PTCH1Q13635 1447 aa22.16■■□□□ 1.14
NDE1-203ENST00000570727 NUTM2BA6NNL0 878 aaPredicted RBP22.16■■□□□ 1.14
NDE1-203ENST00000570727 NUTM2EB1AL46 878 aaPredicted RBP22.16■■□□□ 1.14
NDE1-203ENST00000570727 NUTM2AQ8IVF1 878 aaPredicted RBP22.16■■□□□ 1.14
NDE1-203ENST00000570727 LRRC59Q96AG4 307 aaKnown RBP22.16■■□□□ 1.14
NDE1-203ENST00000570727 ZNF772Q68DY9 489 aaPredicted RBP22.15■■□□□ 1.14
NDE1-203ENST00000570727 C1orf167Q5SNV9 1468 aa22.15■■□□□ 1.14
NDE1-203ENST00000570727 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
NDE1-203ENST00000570727 PRAG1Q86YV5 1406 aa22.14■■□□□ 1.13
NDE1-203ENST00000570727 ADGRF5Q8IZF2 1346 aa22.12■■□□□ 1.13
NDE1-203ENST00000570727 RGL3Q3MIN7 710 aa22.11■■□□□ 1.13
NDE1-203ENST00000570727 ORAI2Q96SN7 254 aa22.11■■□□□ 1.13
NDE1-203ENST00000570727 SPATA31E1Q6ZUB1 1445 aa22.1■■□□□ 1.13
NDE1-203ENST00000570727 CCDC144AA2RUR9 1427 aa22.09■■□□□ 1.13
NDE1-203ENST00000570727 PNPLA6Q8IY17 1366 aa22.09■■□□□ 1.13
NDE1-203ENST00000570727 LAMC1P11047 1609 aa22.08■■□□□ 1.13
NDE1-203ENST00000570727 AFF2P51816 1311 aa22.06■■□□□ 1.12
NDE1-203ENST00000570727 RXRBP28702 533 aa22.06■■□□□ 1.12
NDE1-203ENST00000570727 SOS2Q07890 1332 aaPredicted RBP22.06■■□□□ 1.12
NDE1-203ENST00000570727 IFT172Q9UG01 1749 aa22.05■■□□□ 1.12
NDE1-203ENST00000570727 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
NDE1-203ENST00000570727 STK26Q9P289 416 aa22.03■■□□□ 1.12
NDE1-203ENST00000570727 WAPLQ7Z5K2 1190 aa22.02■■□□□ 1.12
NDE1-203ENST00000570727 C8orf37Q96NL8 207 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms