RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 RIMS2Q9UQ26 1411 aa17.72■□□□□ 0.43
NUP93-220ENST00000569842 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.42
NUP93-220ENST00000569842 NEXMIFQ5QGS0 1516 aa17.7■□□□□ 0.42
NUP93-220ENST00000569842 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
NUP93-220ENST00000569842 VGFO15240 615 aaPredicted RBP17.69■□□□□ 0.42
NUP93-220ENST00000569842 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
NUP93-220ENST00000569842 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
NUP93-220ENST00000569842 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
NUP93-220ENST00000569842 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.68■□□□□ 0.42
NUP93-220ENST00000569842 ARHGAP23Q9P227 1491 aa17.68■□□□□ 0.42
NUP93-220ENST00000569842 PPLO60437 1756 aa17.68■□□□□ 0.42
NUP93-220ENST00000569842 SLIT1O75093 1534 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 LTKP29376 864 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 TXNDC2Q86VQ3 553 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 EID1Q9Y6B2 187 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 LMTK3Q96Q04 1460 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 IFT172Q9UG01 1749 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 MYOM2P54296 1465 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 HSPA2P54652 639 aa17.67■□□□□ 0.42
NUP93-220ENST00000569842 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
NUP93-220ENST00000569842 NBPF8Q3BBV2 869 aa17.66■□□□□ 0.42
NUP93-220ENST00000569842 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.41
NUP93-220ENST00000569842 ANKLE2Q86XL3 938 aa17.64■□□□□ 0.41
NUP93-220ENST00000569842 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
NUP93-220ENST00000569842 NRXN1Q9ULB1 1477 aa17.63■□□□□ 0.41
NUP93-220ENST00000569842 AEBP2Q6ZN18 517 aaPredicted RBP17.61■□□□□ 0.41
NUP93-220ENST00000569842 BCANQ96GW7 911 aa17.61■□□□□ 0.41
NUP93-220ENST00000569842 PIK3C2GO75747 1445 aa17.61■□□□□ 0.41
NUP93-220ENST00000569842 NCKAP5LQ9HCH0 1330 aa17.6■□□□□ 0.41
NUP93-220ENST00000569842 PLEKHG1Q9ULL1 1385 aa17.59■□□□□ 0.41
NUP93-220ENST00000569842 CFAP70Q5T0N1 1121 aa17.59■□□□□ 0.41
NUP93-220ENST00000569842 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
NUP93-220ENST00000569842 NBPF1Q3BBV0 1214 aa17.56■□□□□ 0.4
NUP93-220ENST00000569842 SLC26A8Q96RN1 970 aa17.55■□□□□ 0.4
NUP93-220ENST00000569842 SETBP1Q9Y6X0 1596 aa17.54■□□□□ 0.4
NUP93-220ENST00000569842 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
NUP93-220ENST00000569842 ROCK2O75116 1388 aaKnown RBP17.54■□□□□ 0.4
NUP93-220ENST00000569842 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
NUP93-220ENST00000569842 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
NUP93-220ENST00000569842 MED14O60244 1454 aa17.53■□□□□ 0.4
NUP93-220ENST00000569842 ALKQ9UM73 1620 aa17.53■□□□□ 0.4
NUP93-220ENST00000569842 NRXN3Q9Y4C0 1643 aa17.53■□□□□ 0.4
NUP93-220ENST00000569842 POLR1AO95602 1720 aaPredicted RBP17.53■□□□□ 0.4
NUP93-220ENST00000569842 ADAMTS13Q76LX8 1427 aa17.53■□□□□ 0.4
NUP93-220ENST00000569842 TMEM132EQ6IEE7 984 aa17.53■□□□□ 0.4
NUP93-220ENST00000569842 IQGAP1P46940 1657 aa17.52■□□□□ 0.4
NUP93-220ENST00000569842 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
NUP93-220ENST00000569842 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
NUP93-220ENST00000569842 TBX22Q9Y458 520 aa17.5■□□□□ 0.39
NUP93-220ENST00000569842 METP08581 1390 aa17.49■□□□□ 0.39
NUP93-220ENST00000569842 LAMC1P11047 1609 aa17.49■□□□□ 0.39
NUP93-220ENST00000569842 STRCQ7RTU9 1775 aa17.49■□□□□ 0.39
NUP93-220ENST00000569842 GPRASP1Q5JY77 1395 aa17.49■□□□□ 0.39
NUP93-220ENST00000569842 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
NUP93-220ENST00000569842 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
NUP93-220ENST00000569842 SETD1AO15047 1707 aaKnown RBP17.47■□□□□ 0.39
NUP93-220ENST00000569842 DIP2AQ14689 1571 aa17.46■□□□□ 0.39
NUP93-220ENST00000569842 STK26Q9P289 416 aa17.46■□□□□ 0.39
NUP93-220ENST00000569842 TRAK1Q9UPV9 953 aa17.44■□□□□ 0.38
NUP93-220ENST00000569842 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
NUP93-220ENST00000569842 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
NUP93-220ENST00000569842 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
NUP93-220ENST00000569842 USP47Q96K76 1375 aa17.42■□□□□ 0.38
NUP93-220ENST00000569842 PTPRUQ92729 1446 aa17.42■□□□□ 0.38
NUP93-220ENST00000569842 PIK3R4Q99570 1358 aa17.41■□□□□ 0.38
NUP93-220ENST00000569842 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
NUP93-220ENST00000569842 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
NUP93-220ENST00000569842 ABCC11Q96J66 1382 aa17.4■□□□□ 0.38
NUP93-220ENST00000569842 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
NUP93-220ENST00000569842 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
NUP93-220ENST00000569842 ST20-MTHFSA0A0A6YYL1 179 aa17.37■□□□□ 0.37
NUP93-220ENST00000569842 KCNA6P17658 529 aa17.37■□□□□ 0.37
NUP93-220ENST00000569842 EIF3AQ14152 1382 aaKnown RBP17.37■□□□□ 0.37
NUP93-220ENST00000569842 TECPR2O15040 1411 aa17.36■□□□□ 0.37
NUP93-220ENST00000569842 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
NUP93-220ENST00000569842 ROBO2Q9HCK4 1378 aa17.36■□□□□ 0.37
NUP93-220ENST00000569842 WAPLQ7Z5K2 1190 aa17.35■□□□□ 0.37
NUP93-220ENST00000569842 POGKQ9P215 609 aa17.35■□□□□ 0.37
NUP93-220ENST00000569842 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
NUP93-220ENST00000569842 SAFB2Q14151 953 aaKnown RBP eCLIP17.34■□□□□ 0.37
NUP93-220ENST00000569842 CENPJQ9HC77 1338 aaPredicted RBP17.34■□□□□ 0.37
NUP93-220ENST00000569842 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
NUP93-220ENST00000569842 XRN1Q8IZH2 1706 aaKnown RBP17.34■□□□□ 0.37
NUP93-220ENST00000569842 ZNF335Q9H4Z2 1342 aaPredicted RBP17.33■□□□□ 0.37
NUP93-220ENST00000569842 SIRT1Q96EB6 747 aa17.33■□□□□ 0.36
NUP93-220ENST00000569842 CPS1P31327 1500 aa17.33■□□□□ 0.36
NUP93-220ENST00000569842 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.36
NUP93-220ENST00000569842 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.36
NUP93-220ENST00000569842 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
NUP93-220ENST00000569842 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
NUP93-220ENST00000569842 FAM135BQ49AJ0 1406 aa17.32■□□□□ 0.36
NUP93-220ENST00000569842 NWD1Q149M9 1564 aa17.31■□□□□ 0.36
NUP93-220ENST00000569842 TESK2Q96S53 571 aa17.3■□□□□ 0.36
NUP93-220ENST00000569842 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
NUP93-220ENST00000569842 PROSER2Q86WR7 435 aaPredicted RBP17.29■□□□□ 0.36
NUP93-220ENST00000569842 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
NUP93-220ENST00000569842 MINK1Q8N4C8 1332 aaPredicted RBP17.28■□□□□ 0.36
NUP93-220ENST00000569842 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
NUP93-220ENST00000569842 QRICH2Q9H0J4 1663 aa17.26■□□□□ 0.35
NUP93-220ENST00000569842 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms