RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 MYOM2P54296 1465 aa17.97■□□□□ 0.47
EDC3-217ENST00000569606 STAC3Q96MF2 364 aa17.95■□□□□ 0.46
EDC3-217ENST00000569606 KDM2AQ9Y2K7 1162 aa17.95■□□□□ 0.46
EDC3-217ENST00000569606 ZFYVE9O95405 1425 aa17.95■□□□□ 0.46
EDC3-217ENST00000569606 SLIT1O75093 1534 aa17.94■□□□□ 0.46
EDC3-217ENST00000569606 AEBP2Q6ZN18 517 aaPredicted RBP17.94■□□□□ 0.46
EDC3-217ENST00000569606 PRAG1Q86YV5 1406 aa17.93■□□□□ 0.46
EDC3-217ENST00000569606 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
EDC3-217ENST00000569606 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
EDC3-217ENST00000569606 ARHGAP23Q9P227 1491 aa17.93■□□□□ 0.46
EDC3-217ENST00000569606 NRXN1Q9ULB1 1477 aa17.93■□□□□ 0.46
EDC3-217ENST00000569606 TMEM2Q9UHN6 1383 aa17.92■□□□□ 0.46
EDC3-217ENST00000569606 THEMISQ8N1K5 641 aaPredicted RBP17.92■□□□□ 0.46
EDC3-217ENST00000569606 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
EDC3-217ENST00000569606 ADGRF5Q8IZF2 1346 aa17.9■□□□□ 0.46
EDC3-217ENST00000569606 VGFO15240 615 aaPredicted RBP17.89■□□□□ 0.45
EDC3-217ENST00000569606 NUTM2DQ5VT03 806 aaPredicted RBP17.89■□□□□ 0.45
EDC3-217ENST00000569606 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.88■□□□□ 0.45
EDC3-217ENST00000569606 KIAA1210Q9ULL0 1709 aa17.88■□□□□ 0.45
EDC3-217ENST00000569606 PIK3C2GO75747 1445 aa17.88■□□□□ 0.45
EDC3-217ENST00000569606 RALGAPBQ86X10 1494 aa17.87■□□□□ 0.45
EDC3-217ENST00000569606 LMTK3Q96Q04 1460 aa17.87■□□□□ 0.45
EDC3-217ENST00000569606 HDGFP51858 240 aaKnown RBP17.86■□□□□ 0.45
EDC3-217ENST00000569606 LTKP29376 864 aa17.85■□□□□ 0.45
EDC3-217ENST00000569606 NRXN3Q9Y4C0 1643 aa17.85■□□□□ 0.45
EDC3-217ENST00000569606 POLR1AO95602 1720 aaPredicted RBP17.84■□□□□ 0.45
EDC3-217ENST00000569606 LAMC1P11047 1609 aa17.84■□□□□ 0.45
EDC3-217ENST00000569606 SCAF11Q99590 1463 aaKnown RBP17.84■□□□□ 0.45
EDC3-217ENST00000569606 TXNDC2Q86VQ3 553 aa17.84■□□□□ 0.45
EDC3-217ENST00000569606 IQGAP1P46940 1657 aa17.83■□□□□ 0.45
EDC3-217ENST00000569606 SETBP1Q9Y6X0 1596 aa17.83■□□□□ 0.45
EDC3-217ENST00000569606 EID1Q9Y6B2 187 aa17.83■□□□□ 0.44
EDC3-217ENST00000569606 SETD1AO15047 1707 aaKnown RBP17.82■□□□□ 0.44
EDC3-217ENST00000569606 PLEKHG1Q9ULL1 1385 aa17.81■□□□□ 0.44
EDC3-217ENST00000569606 ALKQ9UM73 1620 aa17.81■□□□□ 0.44
EDC3-217ENST00000569606 CFAP70Q5T0N1 1121 aa17.8■□□□□ 0.44
EDC3-217ENST00000569606 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
EDC3-217ENST00000569606 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
EDC3-217ENST00000569606 GPRASP1Q5JY77 1395 aa17.79■□□□□ 0.44
EDC3-217ENST00000569606 NBPF1Q3BBV0 1214 aa17.79■□□□□ 0.44
EDC3-217ENST00000569606 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
EDC3-217ENST00000569606 HSPA2P54652 639 aa17.78■□□□□ 0.44
EDC3-217ENST00000569606 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
EDC3-217ENST00000569606 ADGRB1O14514 1584 aa17.78■□□□□ 0.44
EDC3-217ENST00000569606 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.44
EDC3-217ENST00000569606 MED14O60244 1454 aa17.77■□□□□ 0.44
EDC3-217ENST00000569606 ADAMTS13Q76LX8 1427 aa17.77■□□□□ 0.44
EDC3-217ENST00000569606 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
EDC3-217ENST00000569606 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
EDC3-217ENST00000569606 STRCQ7RTU9 1775 aa17.74■□□□□ 0.43
EDC3-217ENST00000569606 NPHP4O75161 1426 aaPredicted RBP17.73■□□□□ 0.43
EDC3-217ENST00000569606 BCANQ96GW7 911 aa17.73■□□□□ 0.43
EDC3-217ENST00000569606 CARD11Q9BXL7 1154 aa17.73■□□□□ 0.43
EDC3-217ENST00000569606 TMEM132EQ6IEE7 984 aa17.71■□□□□ 0.43
EDC3-217ENST00000569606 METP08581 1390 aa17.7■□□□□ 0.42
EDC3-217ENST00000569606 SLC26A8Q96RN1 970 aa17.7■□□□□ 0.42
EDC3-217ENST00000569606 TBX22Q9Y458 520 aa17.7■□□□□ 0.42
EDC3-217ENST00000569606 USP47Q96K76 1375 aa17.68■□□□□ 0.42
EDC3-217ENST00000569606 KNDC1Q76NI1 1749 aa17.68■□□□□ 0.42
EDC3-217ENST00000569606 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
EDC3-217ENST00000569606 YTHDC2Q9H6S0 1430 aaKnown RBP17.68■□□□□ 0.42
EDC3-217ENST00000569606 EIF4G2P78344 907 aaKnown RBP eCLIP17.67■□□□□ 0.42
EDC3-217ENST00000569606 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
EDC3-217ENST00000569606 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
EDC3-217ENST00000569606 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
EDC3-217ENST00000569606 PTPRUQ92729 1446 aa17.64■□□□□ 0.42
EDC3-217ENST00000569606 XRN1Q8IZH2 1706 aaKnown RBP17.64■□□□□ 0.41
EDC3-217ENST00000569606 DLC1Q96QB1 1528 aa17.64■□□□□ 0.41
EDC3-217ENST00000569606 TRAK1Q9UPV9 953 aa17.64■□□□□ 0.41
EDC3-217ENST00000569606 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
EDC3-217ENST00000569606 PIK3R4Q99570 1358 aa17.64■□□□□ 0.41
EDC3-217ENST00000569606 CPS1P31327 1500 aa17.63■□□□□ 0.41
EDC3-217ENST00000569606 TECPR2O15040 1411 aa17.63■□□□□ 0.41
EDC3-217ENST00000569606 STK26Q9P289 416 aa17.62■□□□□ 0.41
EDC3-217ENST00000569606 EIF3AQ14152 1382 aaKnown RBP17.62■□□□□ 0.41
EDC3-217ENST00000569606 ST20-MTHFSA0A0A6YYL1 179 aa17.61■□□□□ 0.41
EDC3-217ENST00000569606 HIRIP3Q9BW71 556 aaPredicted RBP17.61■□□□□ 0.41
EDC3-217ENST00000569606 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
EDC3-217ENST00000569606 NWD1Q149M9 1564 aa17.6■□□□□ 0.41
EDC3-217ENST00000569606 AMOTL2Q9Y2J4 779 aa17.59■□□□□ 0.41
EDC3-217ENST00000569606 FAM135BQ49AJ0 1406 aa17.57■□□□□ 0.4
EDC3-217ENST00000569606 CENPJQ9HC77 1338 aaPredicted RBP17.57■□□□□ 0.4
EDC3-217ENST00000569606 SIRT1Q96EB6 747 aa17.57■□□□□ 0.4
EDC3-217ENST00000569606 PTCH1Q13635 1447 aa17.56■□□□□ 0.4
EDC3-217ENST00000569606 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
EDC3-217ENST00000569606 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
EDC3-217ENST00000569606 ROBO2Q9HCK4 1378 aa17.55■□□□□ 0.4
EDC3-217ENST00000569606 SBNO2Q9Y2G9 1366 aa17.55■□□□□ 0.4
EDC3-217ENST00000569606 KCNA6P17658 529 aa17.55■□□□□ 0.4
EDC3-217ENST00000569606 TESK2Q96S53 571 aa17.55■□□□□ 0.4
EDC3-217ENST00000569606 DMRT2Q9Y5R5 561 aa17.55■□□□□ 0.4
EDC3-217ENST00000569606 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
EDC3-217ENST00000569606 PRAM1Q96QH2 718 aa17.54■□□□□ 0.4
EDC3-217ENST00000569606 WAPLQ7Z5K2 1190 aa17.53■□□□□ 0.4
EDC3-217ENST00000569606 POGKQ9P215 609 aa17.52■□□□□ 0.4
EDC3-217ENST00000569606 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.52■□□□□ 0.39
EDC3-217ENST00000569606 NKTRP30414 1462 aaKnown RBP17.51■□□□□ 0.39
EDC3-217ENST00000569606 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
EDC3-217ENST00000569606 C11orf95C9JLR9 678 aaPredicted RBP17.5■□□□□ 0.39
EDC3-217ENST00000569606 DISP3Q9P2K9 1392 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms