RNA–Protein interactions for RNA: ENST00000569601.5

RPUSD1-210, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-210ENST00000569601 ZFYVE9O95405 1425 aa35.74■■■■□ 3.31
RPUSD1-210ENST00000569601 RIMS2Q9UQ26 1411 aa35.7■■■■□ 3.31
RPUSD1-210ENST00000569601 CHGAP10645 457 aaKnown RBP35.68■■■■□ 3.3
RPUSD1-210ENST00000569601 BCANQ96GW7 911 aa35.67■■■■□ 3.3
RPUSD1-210ENST00000569601 SENP3Q9H4L4 574 aaPredicted RBP35.67■■■■□ 3.3
RPUSD1-210ENST00000569601 KCNA6P17658 529 aa35.66■■■■□ 3.3
RPUSD1-210ENST00000569601 ILDR2Q71H61 639 aa35.65■■■■□ 3.3
RPUSD1-210ENST00000569601 PLEKHG1Q9ULL1 1385 aa35.64■■■■□ 3.3
RPUSD1-210ENST00000569601 PPP1R15AO75807 674 aaPredicted RBP35.63■■■■□ 3.29
RPUSD1-210ENST00000569601 HDGFP51858 240 aaKnown RBP35.62■■■■□ 3.29
RPUSD1-210ENST00000569601 NWD1Q149M9 1564 aa35.62■■■■□ 3.29
RPUSD1-210ENST00000569601 SPHKAPQ2M3C7 1700 aa35.61■■■■□ 3.29
RPUSD1-210ENST00000569601 TMEM94Q12767 1356 aa35.6■■■■□ 3.29
RPUSD1-210ENST00000569601 NAIPQ13075 1403 aa35.59■■■■□ 3.29
RPUSD1-210ENST00000569601 CHD2O14647 1828 aaKnown RBP35.57■■■■□ 3.29
RPUSD1-210ENST00000569601 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.57■■■■□ 3.28
RPUSD1-210ENST00000569601 NUTM2DQ5VT03 806 aaPredicted RBP35.56■■■■□ 3.28
RPUSD1-210ENST00000569601 PROSER2Q86WR7 435 aaPredicted RBP35.56■■■■□ 3.28
RPUSD1-210ENST00000569601 NKTRP30414 1462 aaKnown RBP35.55■■■■□ 3.28
RPUSD1-210ENST00000569601 RBM33Q96EV2 1170 aaKnown RBP35.54■■■■□ 3.28
RPUSD1-210ENST00000569601 MED1Q15648 1581 aaPredicted RBP35.5■■■■□ 3.27
RPUSD1-210ENST00000569601 TBX22Q9Y458 520 aa35.48■■■■□ 3.27
RPUSD1-210ENST00000569601 ADAMTS13Q76LX8 1427 aa35.48■■■■□ 3.27
RPUSD1-210ENST00000569601 HFM1A2PYH4 1435 aa35.46■■■■□ 3.27
RPUSD1-210ENST00000569601 DIP2AQ14689 1571 aa35.45■■■■□ 3.27
RPUSD1-210ENST00000569601 CLTCL1P53675 1640 aa35.43■■■■□ 3.26
RPUSD1-210ENST00000569601 FAM135BQ49AJ0 1406 aa35.4■■■■□ 3.26
RPUSD1-210ENST00000569601 TRPM2O94759 1503 aa35.4■■■■□ 3.26
RPUSD1-210ENST00000569601 TRIM52Q96A61 297 aa35.39■■■■□ 3.26
RPUSD1-210ENST00000569601 MSH6P52701 1360 aa35.38■■■■□ 3.25
RPUSD1-210ENST00000569601 ROBO1Q9Y6N7 1651 aa35.37■■■■□ 3.25
RPUSD1-210ENST00000569601 KIF1BO60333 1816 aa35.36■■■■□ 3.25
RPUSD1-210ENST00000569601 ZNF326Q5BKZ1 582 aaKnown RBP35.36■■■■□ 3.25
RPUSD1-210ENST00000569601 PIK3R4Q99570 1358 aa35.35■■■■□ 3.25
RPUSD1-210ENST00000569601 NRXN3Q9Y4C0 1643 aa35.35■■■■□ 3.25
RPUSD1-210ENST00000569601 SOCS7O14512 581 aa35.34■■■■□ 3.25
RPUSD1-210ENST00000569601 SETBP1Q9Y6X0 1596 aa35.3■■■■□ 3.24
RPUSD1-210ENST00000569601 NEXMIFQ5QGS0 1516 aa35.29■■■■□ 3.24
RPUSD1-210ENST00000569601 PTPRUQ92729 1446 aa35.29■■■■□ 3.24
RPUSD1-210ENST00000569601 NCOA3Q9Y6Q9 1424 aa35.28■■■■□ 3.24
RPUSD1-210ENST00000569601 SLC4A1APQ9BWU0 796 aaKnown RBP35.27■■■■□ 3.24
RPUSD1-210ENST00000569601 AMOTL2Q9Y2J4 779 aa35.26■■■■□ 3.24
RPUSD1-210ENST00000569601 SLAIN2Q9P270 581 aa35.25■■■■□ 3.23
RPUSD1-210ENST00000569601 C14orf37Q86TY3 774 aa35.24■■■■□ 3.23
RPUSD1-210ENST00000569601 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.23■■■■□ 3.23
RPUSD1-210ENST00000569601 XRN1Q8IZH2 1706 aaKnown RBP35.22■■■■□ 3.23
RPUSD1-210ENST00000569601 PHF23Q9BUL5 403 aaPredicted RBP35.21■■■■□ 3.23
RPUSD1-210ENST00000569601 METP08581 1390 aa35.17■■■■□ 3.22
RPUSD1-210ENST00000569601 PHLPP1O60346 1717 aa35.17■■■■□ 3.22
RPUSD1-210ENST00000569601 C19orf44Q9H6X5 657 aa35.16■■■■□ 3.22
RPUSD1-210ENST00000569601 FOXD1Q16676 465 aa35.13■■■■□ 3.21
RPUSD1-210ENST00000569601 CADPS2Q86UW7 1296 aa35.12■■■■□ 3.21
RPUSD1-210ENST00000569601 ATF3P18847 181 aa35.11■■■■□ 3.21
RPUSD1-210ENST00000569601 PPLO60437 1756 aa35.1■■■■□ 3.21
RPUSD1-210ENST00000569601 SETD1AO15047 1707 aaKnown RBP35.07■■■■□ 3.2
RPUSD1-210ENST00000569601 VGFO15240 615 aaPredicted RBP35.07■■■■□ 3.2
RPUSD1-210ENST00000569601 RPGRIP1LQ68CZ1 1315 aa35.06■■■■□ 3.2
RPUSD1-210ENST00000569601 COL16A1Q07092 1604 aaPredicted RBP35.05■■■■□ 3.2
RPUSD1-210ENST00000569601 MPHOSPH9Q99550 1183 aa35.04■■■■□ 3.2
RPUSD1-210ENST00000569601 DCCP43146 1447 aa35.03■■■■□ 3.2
RPUSD1-210ENST00000569601 RGS17Q9UGC6 210 aaPredicted RBP35■■■■□ 3.19
RPUSD1-210ENST00000569601 CCDC144AA2RUR9 1427 aa34.99■■■■□ 3.19
RPUSD1-210ENST00000569601 AHDC1Q5TGY3 1603 aaPredicted RBP34.99■■■■□ 3.19
RPUSD1-210ENST00000569601 NALCNQ8IZF0 1738 aa34.98■■■■□ 3.19
RPUSD1-210ENST00000569601 JCADQ9P266 1359 aa34.98■■■■□ 3.19
RPUSD1-210ENST00000569601 SETD5Q9C0A6 1442 aa34.96■■■■□ 3.19
RPUSD1-210ENST00000569601 ADGRL3Q9HAR2 1447 aa34.96■■■■□ 3.19
RPUSD1-210ENST00000569601 BRINP3Q76B58 766 aa34.95■■■■□ 3.19
RPUSD1-210ENST00000569601 MST1RQ04912 1400 aa34.94■■■■□ 3.18
RPUSD1-210ENST00000569601 SPATA31E1Q6ZUB1 1445 aa34.92■■■■□ 3.18
RPUSD1-210ENST00000569601 IFT172Q9UG01 1749 aa34.92■■■■□ 3.18
RPUSD1-210ENST00000569601 PTCH1Q13635 1447 aa34.9■■■■□ 3.18
RPUSD1-210ENST00000569601 RGL3Q3MIN7 710 aa34.9■■■■□ 3.18
RPUSD1-210ENST00000569601 ASXL1Q8IXJ9 1541 aa34.89■■■■□ 3.18
RPUSD1-210ENST00000569601 ROBO2Q9HCK4 1378 aa34.88■■■■□ 3.17
RPUSD1-210ENST00000569601 ACIN1Q9UKV3 1341 aaKnown RBP34.87■■■■□ 3.17
RPUSD1-210ENST00000569601 ADGRF5Q8IZF2 1346 aa34.86■■■■□ 3.17
RPUSD1-210ENST00000569601 SHPRHQ149N8 1683 aa34.86■■■■□ 3.17
RPUSD1-210ENST00000569601 PRAG1Q86YV5 1406 aa34.85■■■■□ 3.17
RPUSD1-210ENST00000569601 NHSL1Q5SYE7 1610 aa34.84■■■■□ 3.17
RPUSD1-210ENST00000569601 RAB3GAP2Q9H2M9 1393 aa34.83■■■■□ 3.17
RPUSD1-210ENST00000569601 POTEAQ6S8J7 498 aa34.81■■■■□ 3.16
RPUSD1-210ENST00000569601 ANKRD30BQ9BXX2 1392 aa34.81■■■■□ 3.16
RPUSD1-210ENST00000569601 LRP6O75581 1613 aa34.8■■■■□ 3.16
RPUSD1-210ENST00000569601 SPATA31A6Q5VVP1 1343 aa34.8■■■■□ 3.16
RPUSD1-210ENST00000569601 C1orf167Q5SNV9 1468 aa34.76■■■■□ 3.15
RPUSD1-210ENST00000569601 DDX17Q92841 729 aaKnown RBP34.73■■■■□ 3.15
RPUSD1-210ENST00000569601 PIK3C2GO75747 1445 aa34.72■■■■□ 3.15
RPUSD1-210ENST00000569601 MEX3CQ5U5Q3 659 aaKnown RBP34.69■■■■□ 3.14
RPUSD1-210ENST00000569601 STK26Q9P289 416 aa34.69■■■■□ 3.14
RPUSD1-210ENST00000569601 KNDC1Q76NI1 1749 aa34.67■■■■□ 3.14
RPUSD1-210ENST00000569601 TECPR2O15040 1411 aa34.67■■■■□ 3.14
RPUSD1-210ENST00000569601 LRPPRCP42704 1394 aaKnown RBP34.67■■■■□ 3.14
RPUSD1-210ENST00000569601 TMEM132EQ6IEE7 984 aa34.67■■■■□ 3.14
RPUSD1-210ENST00000569601 LRRC59Q96AG4 307 aaKnown RBP34.67■■■■□ 3.14
RPUSD1-210ENST00000569601 ORAI2Q96SN7 254 aa34.66■■■■□ 3.14
RPUSD1-210ENST00000569601 LAMC1P11047 1609 aa34.66■■■■□ 3.14
RPUSD1-210ENST00000569601 NUTM2BA6NNL0 878 aaPredicted RBP34.65■■■■□ 3.14
RPUSD1-210ENST00000569601 NUTM2EB1AL46 878 aaPredicted RBP34.65■■■■□ 3.14
RPUSD1-210ENST00000569601 NUTM2AQ8IVF1 878 aaPredicted RBP34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms