RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 DIP2CQ9Y2E4 1556 aa10.69□□□□□ -0.7
LINC00559-201ENST00000569476 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
LINC00559-201ENST00000569476 TESK2Q96S53 571 aa10.68□□□□□ -0.7
LINC00559-201ENST00000569476 RNF123Q5XPI4 1314 aa10.68□□□□□ -0.7
LINC00559-201ENST00000569476 PUS7Q96PZ0 661 aaKnown RBP10.68□□□□□ -0.7
LINC00559-201ENST00000569476 MYOM1P52179 1685 aa10.68□□□□□ -0.7
LINC00559-201ENST00000569476 ZFYVE9O95405 1425 aa10.67□□□□□ -0.7
LINC00559-201ENST00000569476 BLMP54132 1417 aaPredicted RBP10.67□□□□□ -0.7
LINC00559-201ENST00000569476 MROH2AA6NES4 1674 aa10.67□□□□□ -0.7
LINC00559-201ENST00000569476 NLRP13Q86W25 1043 aa10.67□□□□□ -0.7
LINC00559-201ENST00000569476 NOS1P29475 1434 aa10.67□□□□□ -0.7
LINC00559-201ENST00000569476 AGLP35573 1532 aa10.66□□□□□ -0.7
LINC00559-201ENST00000569476 FKBP8Q14318 412 aa10.66□□□□□ -0.7
LINC00559-201ENST00000569476 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
LINC00559-201ENST00000569476 PIK3C2GO75747 1445 aa10.65□□□□□ -0.7
LINC00559-201ENST00000569476 ASXL1Q8IXJ9 1541 aa10.65□□□□□ -0.7
LINC00559-201ENST00000569476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC00559-201ENST00000569476 PPP6R1Q9UPN7 881 aa10.65□□□□□ -0.7
LINC00559-201ENST00000569476 UGGT1Q9NYU2 1555 aa10.65□□□□□ -0.71
LINC00559-201ENST00000569476 ZNF326Q5BKZ1 582 aaKnown RBP10.64□□□□□ -0.71
LINC00559-201ENST00000569476 AFAP1Q8N556 730 aa10.64□□□□□ -0.71
LINC00559-201ENST00000569476 PER1O15534 1290 aaPredicted RBP10.64□□□□□ -0.71
LINC00559-201ENST00000569476 NUDCQ9Y266 331 aa10.64□□□□□ -0.71
LINC00559-201ENST00000569476 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
LINC00559-201ENST00000569476 PPP4R2Q9NY27 417 aa10.63□□□□□ -0.71
LINC00559-201ENST00000569476 KDM2AQ9Y2K7 1162 aa10.63□□□□□ -0.71
LINC00559-201ENST00000569476 DISP3Q9P2K9 1392 aa10.63□□□□□ -0.71
LINC00559-201ENST00000569476 TMC1Q8TDI8 760 aa10.61□□□□□ -0.71
LINC00559-201ENST00000569476 NPATQ14207 1427 aa10.61□□□□□ -0.71
LINC00559-201ENST00000569476 KIF3BO15066 747 aa10.6□□□□□ -0.71
LINC00559-201ENST00000569476 ADGRB1O14514 1584 aa10.6□□□□□ -0.71
LINC00559-201ENST00000569476 DIP2BQ9P265 1576 aa10.6□□□□□ -0.71
LINC00559-201ENST00000569476 NBPF1Q3BBV0 1214 aa10.59□□□□□ -0.71
LINC00559-201ENST00000569476 NINLQ9Y2I6 1382 aa10.59□□□□□ -0.71
LINC00559-201ENST00000569476 NEXMIFQ5QGS0 1516 aa10.59□□□□□ -0.71
LINC00559-201ENST00000569476 CCDC184Q52MB2 194 aa10.59□□□□□ -0.71
LINC00559-201ENST00000569476 ERVK-7P63135 1459 aa10.59□□□□□ -0.71
LINC00559-201ENST00000569476 PREX1Q8TCU6 1659 aa10.58□□□□□ -0.72
LINC00559-201ENST00000569476 QRICH2Q9H0J4 1663 aa10.58□□□□□ -0.72
LINC00559-201ENST00000569476 NCBP3Q53F19 620 aaKnown RBP10.58□□□□□ -0.72
LINC00559-201ENST00000569476 FAM9BQ8IZU0 186 aa10.58□□□□□ -0.72
LINC00559-201ENST00000569476 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
LINC00559-201ENST00000569476 TSHZ2Q9NRE2 1034 aa10.57□□□□□ -0.72
LINC00559-201ENST00000569476 SIGLEC1Q9BZZ2 1709 aa10.57□□□□□ -0.72
LINC00559-201ENST00000569476 RGL3Q3MIN7 710 aa10.57□□□□□ -0.72
LINC00559-201ENST00000569476 NSD2O96028 1365 aa10.56□□□□□ -0.72
LINC00559-201ENST00000569476 RIMBP3CA6NJZ7 1639 aa10.56□□□□□ -0.72
LINC00559-201ENST00000569476 RIMBP3BA6NNM3 1639 aa10.56□□□□□ -0.72
LINC00559-201ENST00000569476 RIMBP3Q9UFD9 1639 aa10.56□□□□□ -0.72
LINC00559-201ENST00000569476 ARHGEF28Q8N1W1 1705 aaKnown RBP10.55□□□□□ -0.72
LINC00559-201ENST00000569476 C14orf93Q9H972 538 aaKnown RBP10.55□□□□□ -0.72
LINC00559-201ENST00000569476 SLC52A1Q9NWF4 448 aa10.55□□□□□ -0.72
LINC00559-201ENST00000569476 DLC1Q96QB1 1528 aa10.54□□□□□ -0.72
LINC00559-201ENST00000569476 TMEM131LA2VDJ0 1609 aa10.54□□□□□ -0.72
LINC00559-201ENST00000569476 PANK3Q9H999 370 aa10.54□□□□□ -0.72
LINC00559-201ENST00000569476 KNSTRNQ9Y448 316 aa10.53□□□□□ -0.72
LINC00559-201ENST00000569476 SPATA31D1Q6ZQQ2 1576 aa10.53□□□□□ -0.72
LINC00559-201ENST00000569476 ARHGEF40Q8TER5 1519 aa10.52□□□□□ -0.72
LINC00559-201ENST00000569476 MED14O60244 1454 aa10.52□□□□□ -0.73
LINC00559-201ENST00000569476 ANKRD26Q9UPS8 1709 aa10.52□□□□□ -0.73
LINC00559-201ENST00000569476 AMER1Q5JTC6 1135 aaPredicted RBP10.51□□□□□ -0.73
LINC00559-201ENST00000569476 VGFO15240 615 aaPredicted RBP10.51□□□□□ -0.73
LINC00559-201ENST00000569476 POLR3AO14802 1390 aaPredicted RBP10.5□□□□□ -0.73
LINC00559-201ENST00000569476 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
LINC00559-201ENST00000569476 POLR3GLQ9BT43 218 aa10.49□□□□□ -0.73
LINC00559-201ENST00000569476 KNDC1Q76NI1 1749 aa10.49□□□□□ -0.73
LINC00559-201ENST00000569476 FANCIQ9NVI1 1328 aa10.49□□□□□ -0.73
LINC00559-201ENST00000569476 MYT1LQ9UL68 1186 aa10.49□□□□□ -0.73
LINC00559-201ENST00000569476 ADGRF5Q8IZF2 1346 aa10.48□□□□□ -0.73
LINC00559-201ENST00000569476 PPP2R1AP30153 589 aa10.48□□□□□ -0.73
LINC00559-201ENST00000569476 SHPRHQ149N8 1683 aa10.45□□□□□ -0.74
LINC00559-201ENST00000569476 TULP4Q9NRJ4 1543 aa10.45□□□□□ -0.74
LINC00559-201ENST00000569476 RRP1P56182 461 aaKnown RBP10.45□□□□□ -0.74
LINC00559-201ENST00000569476 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
LINC00559-201ENST00000569476 ANKRD36BQ8N2N9 1353 aa10.45□□□□□ -0.74
LINC00559-201ENST00000569476 SETD1AO15047 1707 aaKnown RBP10.45□□□□□ -0.74
LINC00559-201ENST00000569476 ZNF521Q96K83 1311 aa10.45□□□□□ -0.74
LINC00559-201ENST00000569476 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
LINC00559-201ENST00000569476 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
LINC00559-201ENST00000569476 EVC2Q86UK5 1308 aa10.44□□□□□ -0.74
LINC00559-201ENST00000569476 ATAD2Q6PL18 1390 aa10.44□□□□□ -0.74
LINC00559-201ENST00000569476 YEATS2Q9ULM3 1422 aa10.44□□□□□ -0.74
LINC00559-201ENST00000569476 RCAN3Q9UKA8 241 aa10.43□□□□□ -0.74
LINC00559-201ENST00000569476 PTPRMP28827 1452 aa10.42□□□□□ -0.74
LINC00559-201ENST00000569476 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
LINC00559-201ENST00000569476 BCANQ96GW7 911 aa10.42□□□□□ -0.74
LINC00559-201ENST00000569476 KIF13AQ9H1H9 1805 aa10.42□□□□□ -0.74
LINC00559-201ENST00000569476 AAMPQ13685 434 aa10.42□□□□□ -0.74
LINC00559-201ENST00000569476 MYO5BQ9ULV0 1848 aa10.42□□□□□ -0.74
LINC00559-201ENST00000569476 SIRT1Q96EB6 747 aa10.41□□□□□ -0.74
LINC00559-201ENST00000569476 ADGRB2O60241 1585 aa10.41□□□□□ -0.74
LINC00559-201ENST00000569476 CDC42BPGQ6DT37 1551 aa10.41□□□□□ -0.74
LINC00559-201ENST00000569476 IQSEC2Q5JU85 1478 aa10.41□□□□□ -0.74
LINC00559-201ENST00000569476 TRMT2AQ8IZ69 625 aaKnown RBP10.41□□□□□ -0.74
LINC00559-201ENST00000569476 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.41□□□□□ -0.74
LINC00559-201ENST00000569476 CC2D1BQ5T0F9 858 aaKnown RBP10.4□□□□□ -0.74
LINC00559-201ENST00000569476 KIF20BQ96Q89 1820 aa10.4□□□□□ -0.74
LINC00559-201ENST00000569476 ATP7BP35670 1465 aa10.4□□□□□ -0.74
LINC00559-201ENST00000569476 RBM19Q9Y4C8 960 aaKnown RBP10.4□□□□□ -0.74
LINC00559-201ENST00000569476 NSD3Q9BZ95 1437 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms