RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
CHRFAM7A-206ENST00000569278 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.41
CHRFAM7A-206ENST00000569278 RNF39Q9H2S5 420 aa17.58■□□□□ 0.4
CHRFAM7A-206ENST00000569278 RGS17Q9UGC6 210 aaPredicted RBP17.58■□□□□ 0.4
CHRFAM7A-206ENST00000569278 IDI1Q13907 227 aa17.57■□□□□ 0.4
CHRFAM7A-206ENST00000569278 ROBO1Q9Y6N7 1651 aa17.57■□□□□ 0.4
CHRFAM7A-206ENST00000569278 ZFYVE9O95405 1425 aa17.55■□□□□ 0.4
CHRFAM7A-206ENST00000569278 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
CHRFAM7A-206ENST00000569278 ANKRD30AQ9BXX3 1397 aa17.55■□□□□ 0.4
CHRFAM7A-206ENST00000569278 GCC2Q8IWJ2 1684 aa17.55■□□□□ 0.4
CHRFAM7A-206ENST00000569278 CHIC2Q9UKJ5 165 aa17.54■□□□□ 0.4
CHRFAM7A-206ENST00000569278 NKTRP30414 1462 aaKnown RBP17.54■□□□□ 0.4
CHRFAM7A-206ENST00000569278 FAM135BQ49AJ0 1406 aa17.54■□□□□ 0.4
CHRFAM7A-206ENST00000569278 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
CHRFAM7A-206ENST00000569278 UNC13BO14795 1591 aa17.53■□□□□ 0.4
CHRFAM7A-206ENST00000569278 KANK1Q14678 1352 aa17.53■□□□□ 0.4
CHRFAM7A-206ENST00000569278 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
CHRFAM7A-206ENST00000569278 RPRD2Q5VT52 1461 aaKnown RBP17.51■□□□□ 0.39
CHRFAM7A-206ENST00000569278 RBM33Q96EV2 1170 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-206ENST00000569278 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
CHRFAM7A-206ENST00000569278 CHD2O14647 1828 aaKnown RBP17.49■□□□□ 0.39
CHRFAM7A-206ENST00000569278 SLC26A8Q96RN1 970 aa17.49■□□□□ 0.39
CHRFAM7A-206ENST00000569278 E9PCH4 1651 aa17.48■□□□□ 0.39
CHRFAM7A-206ENST00000569278 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
CHRFAM7A-206ENST00000569278 KCNA6P17658 529 aa17.48■□□□□ 0.39
CHRFAM7A-206ENST00000569278 COL16A1Q07092 1604 aaPredicted RBP17.45■□□□□ 0.38
CHRFAM7A-206ENST00000569278 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
CHRFAM7A-206ENST00000569278 IQGAP3Q86VI3 1631 aa17.43■□□□□ 0.38
CHRFAM7A-206ENST00000569278 STAG3Q9UJ98 1225 aa17.43■□□□□ 0.38
CHRFAM7A-206ENST00000569278 ADAMTS13Q76LX8 1427 aa17.43■□□□□ 0.38
CHRFAM7A-206ENST00000569278 RIMS2Q9UQ26 1411 aa17.43■□□□□ 0.38
CHRFAM7A-206ENST00000569278 SETD1AO15047 1707 aaKnown RBP17.43■□□□□ 0.38
CHRFAM7A-206ENST00000569278 PHLPP1O60346 1717 aa17.43■□□□□ 0.38
CHRFAM7A-206ENST00000569278 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
CHRFAM7A-206ENST00000569278 POTEAQ6S8J7 498 aa17.41■□□□□ 0.38
CHRFAM7A-206ENST00000569278 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
CHRFAM7A-206ENST00000569278 NRXN3Q9Y4C0 1643 aa17.39■□□□□ 0.38
CHRFAM7A-206ENST00000569278 APLP2Q06481 763 aa17.39■□□□□ 0.37
CHRFAM7A-206ENST00000569278 PROSER2Q86WR7 435 aaPredicted RBP17.39■□□□□ 0.37
CHRFAM7A-206ENST00000569278 LRP6O75581 1613 aa17.39■□□□□ 0.37
CHRFAM7A-206ENST00000569278 DIP2AQ14689 1571 aa17.38■□□□□ 0.37
CHRFAM7A-206ENST00000569278 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
CHRFAM7A-206ENST00000569278 FAM50AQ14320 339 aaKnown RBP17.37■□□□□ 0.37
CHRFAM7A-206ENST00000569278 MSH6P52701 1360 aa17.37■□□□□ 0.37
CHRFAM7A-206ENST00000569278 PTPRUQ92729 1446 aa17.36■□□□□ 0.37
CHRFAM7A-206ENST00000569278 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
CHRFAM7A-206ENST00000569278 ROCK1Q13464 1354 aa17.35■□□□□ 0.37
CHRFAM7A-206ENST00000569278 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
CHRFAM7A-206ENST00000569278 C1QBPQ07021 282 aaKnown RBP17.34■□□□□ 0.37
CHRFAM7A-206ENST00000569278 NCOA3Q9Y6Q9 1424 aa17.32■□□□□ 0.36
CHRFAM7A-206ENST00000569278 SLAIN2Q9P270 581 aa17.32■□□□□ 0.36
CHRFAM7A-206ENST00000569278 SHPRHQ149N8 1683 aa17.32■□□□□ 0.36
CHRFAM7A-206ENST00000569278 JCADQ9P266 1359 aa17.31■□□□□ 0.36
CHRFAM7A-206ENST00000569278 TBX22Q9Y458 520 aa17.31■□□□□ 0.36
CHRFAM7A-206ENST00000569278 SETBP1Q9Y6X0 1596 aa17.31■□□□□ 0.36
CHRFAM7A-206ENST00000569278 SPHKAPQ2M3C7 1700 aa17.3■□□□□ 0.36
CHRFAM7A-206ENST00000569278 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
CHRFAM7A-206ENST00000569278 TRPM2O94759 1503 aa17.3■□□□□ 0.36
CHRFAM7A-206ENST00000569278 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
CHRFAM7A-206ENST00000569278 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.36
CHRFAM7A-206ENST00000569278 BCANQ96GW7 911 aa17.26■□□□□ 0.35
CHRFAM7A-206ENST00000569278 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
CHRFAM7A-206ENST00000569278 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
CHRFAM7A-206ENST00000569278 ASXL1Q8IXJ9 1541 aa17.25■□□□□ 0.35
CHRFAM7A-206ENST00000569278 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
CHRFAM7A-206ENST00000569278 NEXMIFQ5QGS0 1516 aa17.24■□□□□ 0.35
CHRFAM7A-206ENST00000569278 NUP155O75694 1391 aa17.24■□□□□ 0.35
CHRFAM7A-206ENST00000569278 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
CHRFAM7A-206ENST00000569278 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
CHRFAM7A-206ENST00000569278 DCCP43146 1447 aa17.22■□□□□ 0.35
CHRFAM7A-206ENST00000569278 MST1RQ04912 1400 aa17.22■□□□□ 0.35
CHRFAM7A-206ENST00000569278 METP08581 1390 aa17.21■□□□□ 0.35
CHRFAM7A-206ENST00000569278 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
CHRFAM7A-206ENST00000569278 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
CHRFAM7A-206ENST00000569278 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
CHRFAM7A-206ENST00000569278 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
CHRFAM7A-206ENST00000569278 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
CHRFAM7A-206ENST00000569278 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
CHRFAM7A-206ENST00000569278 CADPS2Q86UW7 1296 aa17.18■□□□□ 0.34
CHRFAM7A-206ENST00000569278 SETD5Q9C0A6 1442 aa17.17■□□□□ 0.34
CHRFAM7A-206ENST00000569278 ADGRL3Q9HAR2 1447 aa17.16■□□□□ 0.34
CHRFAM7A-206ENST00000569278 CACNB1Q02641 598 aaPredicted RBP17.16■□□□□ 0.34
CHRFAM7A-206ENST00000569278 LAMC1P11047 1609 aa17.16■□□□□ 0.34
CHRFAM7A-206ENST00000569278 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
CHRFAM7A-206ENST00000569278 ATF3P18847 181 aa17.14■□□□□ 0.33
CHRFAM7A-206ENST00000569278 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
CHRFAM7A-206ENST00000569278 ITGAEP38570 1179 aa17.13■□□□□ 0.33
CHRFAM7A-206ENST00000569278 NAIPQ13075 1403 aa17.13■□□□□ 0.33
CHRFAM7A-206ENST00000569278 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
CHRFAM7A-206ENST00000569278 PPARGC1BQ86YN6 1023 aaKnown RBP17.12■□□□□ 0.33
CHRFAM7A-206ENST00000569278 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
CHRFAM7A-206ENST00000569278 KIF1BO60333 1816 aa17.11■□□□□ 0.33
CHRFAM7A-206ENST00000569278 CDK12Q9NYV4 1490 aaPredicted RBP17.11■□□□□ 0.33
CHRFAM7A-206ENST00000569278 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
CHRFAM7A-206ENST00000569278 PNPLA6Q8IY17 1366 aa17.1■□□□□ 0.33
CHRFAM7A-206ENST00000569278 PTCH1Q13635 1447 aa17.1■□□□□ 0.33
CHRFAM7A-206ENST00000569278 UPF1Q92900 1129 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHRFAM7A-206ENST00000569278 PPLO60437 1756 aa17.08■□□□□ 0.33
CHRFAM7A-206ENST00000569278 C1orf167Q5SNV9 1468 aa17.08■□□□□ 0.32
CHRFAM7A-206ENST00000569278 RGS12O14924 1447 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms