RNA–Protein interactions for RNA: ENST00000569261.2

TUBAP4-201, Transcript of tubulin alpha pseudogene 4, humanhuman

BASIC

Gene TUBAP4, Length 416 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAP4-201ENST00000569261 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
TUBAP4-201ENST00000569261 SETD1AO15047 1707 aaKnown RBP12.6□□□□□ -0.39
TUBAP4-201ENST00000569261 JCADQ9P266 1359 aa12.6□□□□□ -0.39
TUBAP4-201ENST00000569261 PLEKHG1Q9ULL1 1385 aa12.6□□□□□ -0.39
TUBAP4-201ENST00000569261 RBM33Q96EV2 1170 aaKnown RBP12.6□□□□□ -0.39
TUBAP4-201ENST00000569261 GCC2Q8IWJ2 1684 aa12.6□□□□□ -0.39
TUBAP4-201ENST00000569261 COL16A1Q07092 1604 aaPredicted RBP12.59□□□□□ -0.39
TUBAP4-201ENST00000569261 LOC105371045A0A1W2PR82 267 aa12.59□□□□□ -0.39
TUBAP4-201ENST00000569261 APLP2Q06481 763 aa12.59□□□□□ -0.39
TUBAP4-201ENST00000569261 CHD2O14647 1828 aaKnown RBP12.59□□□□□ -0.39
TUBAP4-201ENST00000569261 BCANQ96GW7 911 aa12.58□□□□□ -0.4
TUBAP4-201ENST00000569261 SLAIN2Q9P270 581 aa12.58□□□□□ -0.4
TUBAP4-201ENST00000569261 CHIC2Q9UKJ5 165 aa12.58□□□□□ -0.4
TUBAP4-201ENST00000569261 TMEM131LA2VDJ0 1609 aa12.58□□□□□ -0.4
TUBAP4-201ENST00000569261 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
TUBAP4-201ENST00000569261 RIMS2Q9UQ26 1411 aa12.57□□□□□ -0.4
TUBAP4-201ENST00000569261 NCOA3Q9Y6Q9 1424 aa12.57□□□□□ -0.4
TUBAP4-201ENST00000569261 DIP2AQ14689 1571 aa12.56□□□□□ -0.4
TUBAP4-201ENST00000569261 ANKRD50Q9ULJ7 1429 aa12.56□□□□□ -0.4
TUBAP4-201ENST00000569261 PPP1R15AO75807 674 aaPredicted RBP12.56□□□□□ -0.4
TUBAP4-201ENST00000569261 AHDC1Q5TGY3 1603 aaPredicted RBP12.55□□□□□ -0.4
TUBAP4-201ENST00000569261 HDGFP51858 240 aaKnown RBP12.55□□□□□ -0.4
TUBAP4-201ENST00000569261 UNC13BO14795 1591 aa12.55□□□□□ -0.4
TUBAP4-201ENST00000569261 SPATA31A6Q5VVP1 1343 aa12.54□□□□□ -0.4
TUBAP4-201ENST00000569261 LRP6O75581 1613 aa12.54□□□□□ -0.4
TUBAP4-201ENST00000569261 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
TUBAP4-201ENST00000569261 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
TUBAP4-201ENST00000569261 PIK3R4Q99570 1358 aa12.53□□□□□ -0.4
TUBAP4-201ENST00000569261 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.52□□□□□ -0.41
TUBAP4-201ENST00000569261 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.52□□□□□ -0.41
TUBAP4-201ENST00000569261 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
TUBAP4-201ENST00000569261 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
TUBAP4-201ENST00000569261 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
TUBAP4-201ENST00000569261 TRPM2O94759 1503 aa12.51□□□□□ -0.41
TUBAP4-201ENST00000569261 E9PCH4 1651 aa12.51□□□□□ -0.41
TUBAP4-201ENST00000569261 MEX3CQ5U5Q3 659 aaKnown RBP12.5□□□□□ -0.41
TUBAP4-201ENST00000569261 ZNF772Q68DY9 489 aaPredicted RBP12.5□□□□□ -0.41
TUBAP4-201ENST00000569261 IQGAP3Q86VI3 1631 aa12.49□□□□□ -0.41
TUBAP4-201ENST00000569261 DCCP43146 1447 aa12.49□□□□□ -0.41
TUBAP4-201ENST00000569261 ATF3P18847 181 aa12.49□□□□□ -0.41
TUBAP4-201ENST00000569261 C19orf44Q9H6X5 657 aa12.49□□□□□ -0.41
TUBAP4-201ENST00000569261 FAM50AQ14320 339 aaKnown RBP12.48□□□□□ -0.41
TUBAP4-201ENST00000569261 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
TUBAP4-201ENST00000569261 ASXL1Q8IXJ9 1541 aa12.47□□□□□ -0.41
TUBAP4-201ENST00000569261 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.41
TUBAP4-201ENST00000569261 XRN1Q8IZH2 1706 aaKnown RBP12.46□□□□□ -0.41
TUBAP4-201ENST00000569261 ROCK1Q13464 1354 aa12.45□□□□□ -0.42
TUBAP4-201ENST00000569261 SETBP1Q9Y6X0 1596 aa12.45□□□□□ -0.42
TUBAP4-201ENST00000569261 UPF1Q92900 1129 aaKnown RBP eCLIP12.45□□□□□ -0.42
TUBAP4-201ENST00000569261 TRIM52Q96A61 297 aa12.45□□□□□ -0.42
TUBAP4-201ENST00000569261 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
TUBAP4-201ENST00000569261 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
TUBAP4-201ENST00000569261 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
TUBAP4-201ENST00000569261 BRINP3Q76B58 766 aa12.44□□□□□ -0.42
TUBAP4-201ENST00000569261 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
TUBAP4-201ENST00000569261 NRXN3Q9Y4C0 1643 aa12.44□□□□□ -0.42
TUBAP4-201ENST00000569261 AMOTL2Q9Y2J4 779 aa12.43□□□□□ -0.42
TUBAP4-201ENST00000569261 RXRBP28702 533 aa12.42□□□□□ -0.42
TUBAP4-201ENST00000569261 MST1RQ04912 1400 aa12.42□□□□□ -0.42
TUBAP4-201ENST00000569261 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.42
TUBAP4-201ENST00000569261 NUTM2BA6NNL0 878 aaPredicted RBP12.4□□□□□ -0.42
TUBAP4-201ENST00000569261 NUTM2EB1AL46 878 aaPredicted RBP12.4□□□□□ -0.42
TUBAP4-201ENST00000569261 NUTM2AQ8IVF1 878 aaPredicted RBP12.4□□□□□ -0.42
TUBAP4-201ENST00000569261 NUP155O75694 1391 aa12.4□□□□□ -0.42
TUBAP4-201ENST00000569261 AFF2P51816 1311 aa12.39□□□□□ -0.43
TUBAP4-201ENST00000569261 ADGRL3Q9HAR2 1447 aa12.39□□□□□ -0.43
TUBAP4-201ENST00000569261 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
TUBAP4-201ENST00000569261 RGS12O14924 1447 aa12.37□□□□□ -0.43
TUBAP4-201ENST00000569261 METP08581 1390 aa12.37□□□□□ -0.43
TUBAP4-201ENST00000569261 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
TUBAP4-201ENST00000569261 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
TUBAP4-201ENST00000569261 C8orf37Q96NL8 207 aa12.35□□□□□ -0.43
TUBAP4-201ENST00000569261 LAMC1P11047 1609 aa12.35□□□□□ -0.43
TUBAP4-201ENST00000569261 NEXMIFQ5QGS0 1516 aa12.35□□□□□ -0.43
TUBAP4-201ENST00000569261 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
TUBAP4-201ENST00000569261 PTCH1Q13635 1447 aa12.34□□□□□ -0.43
TUBAP4-201ENST00000569261 CLTCL1P53675 1640 aa12.33□□□□□ -0.43
TUBAP4-201ENST00000569261 ZNF326Q5BKZ1 582 aaKnown RBP12.33□□□□□ -0.44
TUBAP4-201ENST00000569261 C1orf167Q5SNV9 1468 aa12.33□□□□□ -0.44
TUBAP4-201ENST00000569261 PRAG1Q86YV5 1406 aa12.31□□□□□ -0.44
TUBAP4-201ENST00000569261 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
TUBAP4-201ENST00000569261 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
TUBAP4-201ENST00000569261 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
TUBAP4-201ENST00000569261 KIF1BO60333 1816 aa12.3□□□□□ -0.44
TUBAP4-201ENST00000569261 ATAD2Q6PL18 1390 aa12.3□□□□□ -0.44
TUBAP4-201ENST00000569261 ITGAEP38570 1179 aa12.29□□□□□ -0.44
TUBAP4-201ENST00000569261 NGLY1Q96IV0 654 aa12.29□□□□□ -0.44
TUBAP4-201ENST00000569261 ADAMTS2O95450 1211 aa12.28□□□□□ -0.44
TUBAP4-201ENST00000569261 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
TUBAP4-201ENST00000569261 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
TUBAP4-201ENST00000569261 ROBO2Q9HCK4 1378 aa12.28□□□□□ -0.44
TUBAP4-201ENST00000569261 HFM1A2PYH4 1435 aa12.26□□□□□ -0.45
TUBAP4-201ENST00000569261 ATRNO75882 1429 aa12.26□□□□□ -0.45
TUBAP4-201ENST00000569261 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
TUBAP4-201ENST00000569261 EP400Q96L91 3159 aa12.26□□□□□ -0.45
TUBAP4-201ENST00000569261 USP21Q9UK80 565 aa12.25□□□□□ -0.45
TUBAP4-201ENST00000569261 TRPC5Q9UL62 973 aaPredicted RBP12.25□□□□□ -0.45
TUBAP4-201ENST00000569261 MYOM2P54296 1465 aa12.25□□□□□ -0.45
TUBAP4-201ENST00000569261 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
TUBAP4-201ENST00000569261 FNBP4Q8N3X1 1017 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms