RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 NUTM2DQ5VT03 806 aaPredicted RBP21.58■■□□□ 1.05
COMMD4-225ENST00000569245 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.58■■□□□ 1.05
COMMD4-225ENST00000569245 TMEM131LA2VDJ0 1609 aa21.55■■□□□ 1.04
COMMD4-225ENST00000569245 ZNF326Q5BKZ1 582 aaKnown RBP21.55■■□□□ 1.04
COMMD4-225ENST00000569245 ZFYVE9O95405 1425 aa21.54■■□□□ 1.04
COMMD4-225ENST00000569245 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
COMMD4-225ENST00000569245 TOM1O60784 492 aa21.53■■□□□ 1.04
COMMD4-225ENST00000569245 PLEKHG1Q9ULL1 1385 aa21.52■■□□□ 1.04
COMMD4-225ENST00000569245 PIP4K2BP78356 416 aa21.51■■□□□ 1.03
COMMD4-225ENST00000569245 KCNA6P17658 529 aa21.5■■□□□ 1.03
COMMD4-225ENST00000569245 FOXD1Q16676 465 aa21.49■■□□□ 1.03
COMMD4-225ENST00000569245 LRRC7Q96NW7 1537 aa21.49■■□□□ 1.03
COMMD4-225ENST00000569245 SPHKAPQ2M3C7 1700 aa21.49■■□□□ 1.03
COMMD4-225ENST00000569245 SETD5Q9C0A6 1442 aa21.48■■□□□ 1.03
COMMD4-225ENST00000569245 MPHOSPH9Q99550 1183 aa21.48■■□□□ 1.03
COMMD4-225ENST00000569245 MYO5BQ9ULV0 1848 aa21.48■■□□□ 1.03
COMMD4-225ENST00000569245 ACIN1Q9UKV3 1341 aaKnown RBP21.47■■□□□ 1.03
COMMD4-225ENST00000569245 PROSER2Q86WR7 435 aaPredicted RBP21.46■■□□□ 1.03
COMMD4-225ENST00000569245 TRPM2O94759 1503 aa21.45■■□□□ 1.02
COMMD4-225ENST00000569245 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
COMMD4-225ENST00000569245 TBX22Q9Y458 520 aa21.45■■□□□ 1.02
COMMD4-225ENST00000569245 STRCP1A6NGW2 1772 aa21.45■■□□□ 1.02
COMMD4-225ENST00000569245 RBM33Q96EV2 1170 aaKnown RBP21.43■■□□□ 1.02
COMMD4-225ENST00000569245 CLTCL1P53675 1640 aa21.42■■□□□ 1.02
COMMD4-225ENST00000569245 TMEM94Q12767 1356 aa21.41■■□□□ 1.02
COMMD4-225ENST00000569245 RAB3GAP2Q9H2M9 1393 aa21.4■■□□□ 1.02
COMMD4-225ENST00000569245 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
COMMD4-225ENST00000569245 VGFO15240 615 aaPredicted RBP21.36■■□□□ 1.01
COMMD4-225ENST00000569245 CCDC144AA2RUR9 1427 aa21.36■■□□□ 1.01
COMMD4-225ENST00000569245 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
COMMD4-225ENST00000569245 HSPA1LP34931 641 aa21.35■■□□□ 1.01
COMMD4-225ENST00000569245 C14orf37Q86TY3 774 aa21.35■■□□□ 1.01
COMMD4-225ENST00000569245 RPGRIP1LQ68CZ1 1315 aa21.34■■□□□ 1.01
COMMD4-225ENST00000569245 RGL3Q3MIN7 710 aa21.34■■□□□ 1.01
COMMD4-225ENST00000569245 AMOTL2Q9Y2J4 779 aa21.34■■□□□ 1.01
COMMD4-225ENST00000569245 PIK3R4Q99570 1358 aa21.34■■□□□ 1.01
COMMD4-225ENST00000569245 DIP2AQ14689 1571 aa21.32■■□□□ 1
COMMD4-225ENST00000569245 NWD1Q149M9 1564 aa21.32■■□□□ 1
COMMD4-225ENST00000569245 KIF1BO60333 1816 aa21.32■■□□□ 1
COMMD4-225ENST00000569245 NEXMIFQ5QGS0 1516 aa21.31■■□□□ 1
COMMD4-225ENST00000569245 MSH6P52701 1360 aa21.31■■□□□ 1
COMMD4-225ENST00000569245 ALKQ9UM73 1620 aa21.29■■□□□ 1
COMMD4-225ENST00000569245 SETBP1Q9Y6X0 1596 aa21.28■■□□□ 1
COMMD4-225ENST00000569245 METP08581 1390 aa21.27■■□□□ 1
COMMD4-225ENST00000569245 HRCP23327 699 aa21.27■■□□□ 1
COMMD4-225ENST00000569245 CHD2O14647 1828 aaKnown RBP21.27■□□□□ 0.99
COMMD4-225ENST00000569245 PTPRUQ92729 1446 aa21.26■□□□□ 0.99
COMMD4-225ENST00000569245 XIRP1Q702N8 1843 aaKnown RBP21.25■□□□□ 0.99
COMMD4-225ENST00000569245 NCOA3Q9Y6Q9 1424 aa21.23■□□□□ 0.99
COMMD4-225ENST00000569245 NRXN3Q9Y4C0 1643 aa21.23■□□□□ 0.99
COMMD4-225ENST00000569245 ATF3P18847 181 aa21.23■□□□□ 0.99
COMMD4-225ENST00000569245 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
COMMD4-225ENST00000569245 SLAIN2Q9P270 581 aa21.23■□□□□ 0.99
COMMD4-225ENST00000569245 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
COMMD4-225ENST00000569245 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
COMMD4-225ENST00000569245 ADGRF5Q8IZF2 1346 aa21.21■□□□□ 0.99
COMMD4-225ENST00000569245 ANKRD30BQ9BXX2 1392 aa21.21■□□□□ 0.99
COMMD4-225ENST00000569245 CADPS2Q86UW7 1296 aa21.2■□□□□ 0.98
COMMD4-225ENST00000569245 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
COMMD4-225ENST00000569245 PPLO60437 1756 aa21.15■□□□□ 0.98
COMMD4-225ENST00000569245 XRN1Q8IZH2 1706 aaKnown RBP21.13■□□□□ 0.97
COMMD4-225ENST00000569245 STK26Q9P289 416 aa21.13■□□□□ 0.97
COMMD4-225ENST00000569245 ROBO2Q9HCK4 1378 aa21.1■□□□□ 0.97
COMMD4-225ENST00000569245 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
COMMD4-225ENST00000569245 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
COMMD4-225ENST00000569245 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.09■□□□□ 0.97
COMMD4-225ENST00000569245 PIK3C2GO75747 1445 aa21.08■□□□□ 0.97
COMMD4-225ENST00000569245 KDM2AQ9Y2K7 1162 aa21.08■□□□□ 0.97
COMMD4-225ENST00000569245 DCCP43146 1447 aa21.07■□□□□ 0.96
COMMD4-225ENST00000569245 PTCH1Q13635 1447 aa21.07■□□□□ 0.96
COMMD4-225ENST00000569245 DCAF11Q8TEB1 546 aa21.07■□□□□ 0.96
COMMD4-225ENST00000569245 ADGRL3Q9HAR2 1447 aa21.06■□□□□ 0.96
COMMD4-225ENST00000569245 C14orf93Q9H972 538 aaKnown RBP21.06■□□□□ 0.96
COMMD4-225ENST00000569245 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
COMMD4-225ENST00000569245 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
COMMD4-225ENST00000569245 SETD1AO15047 1707 aaKnown RBP21.04■□□□□ 0.96
COMMD4-225ENST00000569245 BRINP3Q76B58 766 aa21.04■□□□□ 0.96
COMMD4-225ENST00000569245 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
COMMD4-225ENST00000569245 LRPPRCP42704 1394 aaKnown RBP21.03■□□□□ 0.96
COMMD4-225ENST00000569245 MYOM2P54296 1465 aa21.02■□□□□ 0.96
COMMD4-225ENST00000569245 WAPLQ7Z5K2 1190 aa21.02■□□□□ 0.96
COMMD4-225ENST00000569245 MST1RQ04912 1400 aa21.01■□□□□ 0.95
COMMD4-225ENST00000569245 MED1Q15648 1581 aaPredicted RBP21.01■□□□□ 0.95
COMMD4-225ENST00000569245 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
COMMD4-225ENST00000569245 ABCC11Q96J66 1382 aa21■□□□□ 0.95
COMMD4-225ENST00000569245 PRAG1Q86YV5 1406 aa21■□□□□ 0.95
COMMD4-225ENST00000569245 NRXN1Q9ULB1 1477 aa21■□□□□ 0.95
COMMD4-225ENST00000569245 YTHDC2Q9H6S0 1430 aaKnown RBP20.99■□□□□ 0.95
COMMD4-225ENST00000569245 ILDR2Q71H61 639 aa20.99■□□□□ 0.95
COMMD4-225ENST00000569245 STAC3Q96MF2 364 aa20.99■□□□□ 0.95
COMMD4-225ENST00000569245 PHLPP1O60346 1717 aa20.97■□□□□ 0.95
COMMD4-225ENST00000569245 JCADQ9P266 1359 aa20.97■□□□□ 0.95
COMMD4-225ENST00000569245 TECPR2O15040 1411 aa20.96■□□□□ 0.95
COMMD4-225ENST00000569245 NALCNQ8IZF0 1738 aa20.96■□□□□ 0.95
COMMD4-225ENST00000569245 ASXL1Q8IXJ9 1541 aa20.95■□□□□ 0.94
COMMD4-225ENST00000569245 PLEKHH1Q9ULM0 1364 aa20.95■□□□□ 0.94
COMMD4-225ENST00000569245 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
COMMD4-225ENST00000569245 SIRT1Q96EB6 747 aa20.94■□□□□ 0.94
COMMD4-225ENST00000569245 POGKQ9P215 609 aa20.94■□□□□ 0.94
COMMD4-225ENST00000569245 SAFB2Q14151 953 aaKnown RBP eCLIP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms