RNA–Protein interactions for RNA: ENST00000569129.5

CPT1A-209, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 4

Gene CPT1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-209ENST00000569129 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
CPT1A-209ENST00000569129 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
CPT1A-209ENST00000569129 ZFYVE9O95405 1425 aa16.79■□□□□ 0.28
CPT1A-209ENST00000569129 PLEKHG1Q9ULL1 1385 aa16.77■□□□□ 0.28
CPT1A-209ENST00000569129 CHD2O14647 1828 aaKnown RBP16.77■□□□□ 0.28
CPT1A-209ENST00000569129 BCANQ96GW7 911 aa16.77■□□□□ 0.28
CPT1A-209ENST00000569129 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.28
CPT1A-209ENST00000569129 SRCAPQ6ZRS2 3230 aa16.77■□□□□ 0.27
CPT1A-209ENST00000569129 CHIC2Q9UKJ5 165 aa16.76■□□□□ 0.27
CPT1A-209ENST00000569129 FGD6Q6ZV73 1430 aa16.76■□□□□ 0.27
CPT1A-209ENST00000569129 SPATA31A6Q5VVP1 1343 aa16.75■□□□□ 0.27
CPT1A-209ENST00000569129 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
CPT1A-209ENST00000569129 ANKRD30AQ9BXX3 1397 aa16.75■□□□□ 0.27
CPT1A-209ENST00000569129 RIMS2Q9UQ26 1411 aa16.74■□□□□ 0.27
CPT1A-209ENST00000569129 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
CPT1A-209ENST00000569129 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
CPT1A-209ENST00000569129 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
CPT1A-209ENST00000569129 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
CPT1A-209ENST00000569129 MEX3CQ5U5Q3 659 aaKnown RBP16.72■□□□□ 0.27
CPT1A-209ENST00000569129 ZNF772Q68DY9 489 aaPredicted RBP16.72■□□□□ 0.27
CPT1A-209ENST00000569129 TBX22Q9Y458 520 aa16.72■□□□□ 0.27
CPT1A-209ENST00000569129 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
CPT1A-209ENST00000569129 RPRD2Q5VT52 1461 aaKnown RBP16.71■□□□□ 0.27
CPT1A-209ENST00000569129 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
CPT1A-209ENST00000569129 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
CPT1A-209ENST00000569129 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
CPT1A-209ENST00000569129 PPP1R15AO75807 674 aaPredicted RBP16.7■□□□□ 0.26
CPT1A-209ENST00000569129 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.7■□□□□ 0.26
CPT1A-209ENST00000569129 DIP2AQ14689 1571 aa16.68■□□□□ 0.26
CPT1A-209ENST00000569129 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
CPT1A-209ENST00000569129 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
CPT1A-209ENST00000569129 CADPS2Q86UW7 1296 aa16.68■□□□□ 0.26
CPT1A-209ENST00000569129 RXRBP28702 533 aa16.67■□□□□ 0.26
CPT1A-209ENST00000569129 C19orf44Q9H6X5 657 aa16.67■□□□□ 0.26
CPT1A-209ENST00000569129 BRINP3Q76B58 766 aa16.66■□□□□ 0.26
CPT1A-209ENST00000569129 CDK12Q9NYV4 1490 aaPredicted RBP16.66■□□□□ 0.26
CPT1A-209ENST00000569129 ATF3P18847 181 aa16.65■□□□□ 0.26
CPT1A-209ENST00000569129 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
CPT1A-209ENST00000569129 NUTM2DQ5VT03 806 aaPredicted RBP16.65■□□□□ 0.26
CPT1A-209ENST00000569129 PIK3R4Q99570 1358 aa16.64■□□□□ 0.26
CPT1A-209ENST00000569129 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
CPT1A-209ENST00000569129 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
CPT1A-209ENST00000569129 NUTM2BA6NNL0 878 aaPredicted RBP16.64■□□□□ 0.25
CPT1A-209ENST00000569129 NUTM2EB1AL46 878 aaPredicted RBP16.64■□□□□ 0.25
CPT1A-209ENST00000569129 NUTM2AQ8IVF1 878 aaPredicted RBP16.64■□□□□ 0.25
CPT1A-209ENST00000569129 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
CPT1A-209ENST00000569129 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
CPT1A-209ENST00000569129 AFF2P51816 1311 aa16.62■□□□□ 0.25
CPT1A-209ENST00000569129 SETD5Q9C0A6 1442 aa16.61■□□□□ 0.25
CPT1A-209ENST00000569129 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
CPT1A-209ENST00000569129 AMOTL2Q9Y2J4 779 aa16.6■□□□□ 0.25
CPT1A-209ENST00000569129 RGS12O14924 1447 aa16.6■□□□□ 0.25
CPT1A-209ENST00000569129 DCCP43146 1447 aa16.59■□□□□ 0.25
CPT1A-209ENST00000569129 TRPM2O94759 1503 aa16.59■□□□□ 0.25
CPT1A-209ENST00000569129 UNC13BO14795 1591 aa16.58■□□□□ 0.24
CPT1A-209ENST00000569129 E9PCH4 1651 aa16.58■□□□□ 0.24
CPT1A-209ENST00000569129 NHSL1Q5SYE7 1610 aa16.57■□□□□ 0.24
CPT1A-209ENST00000569129 MST1RQ04912 1400 aa16.57■□□□□ 0.24
CPT1A-209ENST00000569129 APLP2Q06481 763 aa16.57■□□□□ 0.24
CPT1A-209ENST00000569129 DDX17Q92841 729 aaKnown RBP16.55■□□□□ 0.24
CPT1A-209ENST00000569129 XRN1Q8IZH2 1706 aaKnown RBP16.55■□□□□ 0.24
CPT1A-209ENST00000569129 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
CPT1A-209ENST00000569129 QTRT2Q9H974 415 aaKnown RBP16.54■□□□□ 0.24
CPT1A-209ENST00000569129 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
CPT1A-209ENST00000569129 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
CPT1A-209ENST00000569129 RBM6P78332 1123 aaKnown RBP16.53■□□□□ 0.24
CPT1A-209ENST00000569129 C8orf37Q96NL8 207 aa16.53■□□□□ 0.24
CPT1A-209ENST00000569129 LRRC59Q96AG4 307 aaKnown RBP16.52■□□□□ 0.24
CPT1A-209ENST00000569129 EP400Q96L91 3159 aa16.51■□□□□ 0.23
CPT1A-209ENST00000569129 IQGAP3Q86VI3 1631 aa16.51■□□□□ 0.23
CPT1A-209ENST00000569129 SETBP1Q9Y6X0 1596 aa16.51■□□□□ 0.23
CPT1A-209ENST00000569129 METP08581 1390 aa16.51■□□□□ 0.23
CPT1A-209ENST00000569129 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
CPT1A-209ENST00000569129 NALCNQ8IZF0 1738 aa16.46■□□□□ 0.23
CPT1A-209ENST00000569129 ADAMTS2O95450 1211 aa16.46■□□□□ 0.23
CPT1A-209ENST00000569129 NGLY1Q96IV0 654 aa16.45■□□□□ 0.22
CPT1A-209ENST00000569129 C1orf167Q5SNV9 1468 aa16.44■□□□□ 0.22
CPT1A-209ENST00000569129 NUP155O75694 1391 aa16.44■□□□□ 0.22
CPT1A-209ENST00000569129 ROCK1Q13464 1354 aa16.44■□□□□ 0.22
CPT1A-209ENST00000569129 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
CPT1A-209ENST00000569129 LAMC1P11047 1609 aa16.43■□□□□ 0.22
CPT1A-209ENST00000569129 USP21Q9UK80 565 aa16.41■□□□□ 0.22
CPT1A-209ENST00000569129 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
CPT1A-209ENST00000569129 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
CPT1A-209ENST00000569129 FNBP4Q8N3X1 1017 aaPredicted RBP16.4■□□□□ 0.22
CPT1A-209ENST00000569129 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
CPT1A-209ENST00000569129 NEXMIFQ5QGS0 1516 aa16.4■□□□□ 0.22
CPT1A-209ENST00000569129 SPHKAPQ2M3C7 1700 aa16.39■□□□□ 0.21
CPT1A-209ENST00000569129 ATRNO75882 1429 aa16.39■□□□□ 0.21
CPT1A-209ENST00000569129 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
CPT1A-209ENST00000569129 PTCH1Q13635 1447 aa16.38■□□□□ 0.21
CPT1A-209ENST00000569129 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
CPT1A-209ENST00000569129 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
CPT1A-209ENST00000569129 COL22A1Q8NFW1 1626 aaPredicted RBP16.35■□□□□ 0.21
CPT1A-209ENST00000569129 MYOM2P54296 1465 aa16.35■□□□□ 0.21
CPT1A-209ENST00000569129 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
CPT1A-209ENST00000569129 BCL9LQ86UU0 1499 aa16.33■□□□□ 0.2
CPT1A-209ENST00000569129 PRAG1Q86YV5 1406 aa16.32■□□□□ 0.2
CPT1A-209ENST00000569129 ITGAEP38570 1179 aa16.3■□□□□ 0.2
CPT1A-209ENST00000569129 FOXD1Q16676 465 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms