RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 SLC26A8Q96RN1 970 aa20.98■□□□□ 0.95
CNOT1-215ENST00000569020 E9PCH4 1651 aa20.98■□□□□ 0.95
CNOT1-215ENST00000569020 TMEM131LA2VDJ0 1609 aa20.96■□□□□ 0.95
CNOT1-215ENST00000569020 IQGAP3Q86VI3 1631 aa20.96■□□□□ 0.95
CNOT1-215ENST00000569020 HDGFP51858 240 aaKnown RBP20.96■□□□□ 0.95
CNOT1-215ENST00000569020 NWD1Q149M9 1564 aa20.95■□□□□ 0.94
CNOT1-215ENST00000569020 TMEM94Q12767 1356 aa20.95■□□□□ 0.94
CNOT1-215ENST00000569020 CHD2O14647 1828 aaKnown RBP20.93■□□□□ 0.94
CNOT1-215ENST00000569020 PPP1R15AO75807 674 aaPredicted RBP20.93■□□□□ 0.94
CNOT1-215ENST00000569020 PROSER2Q86WR7 435 aaPredicted RBP20.93■□□□□ 0.94
CNOT1-215ENST00000569020 ZFYVE9O95405 1425 aa20.93■□□□□ 0.94
CNOT1-215ENST00000569020 NKTRP30414 1462 aaKnown RBP20.93■□□□□ 0.94
CNOT1-215ENST00000569020 ITGAEP38570 1179 aa20.92■□□□□ 0.94
CNOT1-215ENST00000569020 PLEKHG1Q9ULL1 1385 aa20.92■□□□□ 0.94
CNOT1-215ENST00000569020 RIMS2Q9UQ26 1411 aa20.92■□□□□ 0.94
CNOT1-215ENST00000569020 CHGAP10645 457 aaKnown RBP20.9■□□□□ 0.94
CNOT1-215ENST00000569020 FAM135BQ49AJ0 1406 aa20.89■□□□□ 0.94
CNOT1-215ENST00000569020 NUP155O75694 1391 aa20.88■□□□□ 0.93
CNOT1-215ENST00000569020 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
CNOT1-215ENST00000569020 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.88■□□□□ 0.93
CNOT1-215ENST00000569020 ROBO1Q9Y6N7 1651 aa20.88■□□□□ 0.93
CNOT1-215ENST00000569020 RBM33Q96EV2 1170 aaKnown RBP20.87■□□□□ 0.93
CNOT1-215ENST00000569020 MSH6P52701 1360 aa20.85■□□□□ 0.93
CNOT1-215ENST00000569020 SPHKAPQ2M3C7 1700 aa20.84■□□□□ 0.93
CNOT1-215ENST00000569020 TBX22Q9Y458 520 aa20.83■□□□□ 0.93
CNOT1-215ENST00000569020 DIP2AQ14689 1571 aa20.83■□□□□ 0.92
CNOT1-215ENST00000569020 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
CNOT1-215ENST00000569020 ADAMTS13Q76LX8 1427 aa20.78■□□□□ 0.92
CNOT1-215ENST00000569020 PHLPP1O60346 1717 aa20.78■□□□□ 0.92
CNOT1-215ENST00000569020 NCOA3Q9Y6Q9 1424 aa20.78■□□□□ 0.92
CNOT1-215ENST00000569020 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
CNOT1-215ENST00000569020 SLAIN2Q9P270 581 aa20.77■□□□□ 0.92
CNOT1-215ENST00000569020 TRPM2O94759 1503 aa20.77■□□□□ 0.92
CNOT1-215ENST00000569020 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
CNOT1-215ENST00000569020 RRBP1Q9P2E9 1410 aaKnown RBP20.74■□□□□ 0.91
CNOT1-215ENST00000569020 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.74■□□□□ 0.91
CNOT1-215ENST00000569020 KIF1BO60333 1816 aa20.72■□□□□ 0.91
CNOT1-215ENST00000569020 ZNF326Q5BKZ1 582 aaKnown RBP20.71■□□□□ 0.91
CNOT1-215ENST00000569020 NRXN3Q9Y4C0 1643 aa20.71■□□□□ 0.91
CNOT1-215ENST00000569020 RGS17Q9UGC6 210 aaPredicted RBP20.7■□□□□ 0.9
CNOT1-215ENST00000569020 AMOTL2Q9Y2J4 779 aa20.7■□□□□ 0.9
CNOT1-215ENST00000569020 SETBP1Q9Y6X0 1596 aa20.69■□□□□ 0.9
CNOT1-215ENST00000569020 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
CNOT1-215ENST00000569020 CADPS2Q86UW7 1296 aa20.69■□□□□ 0.9
CNOT1-215ENST00000569020 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
CNOT1-215ENST00000569020 ATF3P18847 181 aa20.68■□□□□ 0.9
CNOT1-215ENST00000569020 NAIPQ13075 1403 aa20.68■□□□□ 0.9
CNOT1-215ENST00000569020 JCADQ9P266 1359 aa20.67■□□□□ 0.9
CNOT1-215ENST00000569020 PTPRUQ92729 1446 aa20.67■□□□□ 0.9
CNOT1-215ENST00000569020 COL16A1Q07092 1604 aaPredicted RBP20.67■□□□□ 0.9
CNOT1-215ENST00000569020 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
CNOT1-215ENST00000569020 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
CNOT1-215ENST00000569020 TRIM52Q96A61 297 aa20.62■□□□□ 0.89
CNOT1-215ENST00000569020 AHDC1Q5TGY3 1603 aaPredicted RBP20.62■□□□□ 0.89
CNOT1-215ENST00000569020 DCCP43146 1447 aa20.61■□□□□ 0.89
CNOT1-215ENST00000569020 HFM1A2PYH4 1435 aa20.61■□□□□ 0.89
CNOT1-215ENST00000569020 METP08581 1390 aa20.59■□□□□ 0.89
CNOT1-215ENST00000569020 SHPRHQ149N8 1683 aa20.59■□□□□ 0.89
CNOT1-215ENST00000569020 POTEAQ6S8J7 498 aa20.59■□□□□ 0.89
CNOT1-215ENST00000569020 SPATA31A6Q5VVP1 1343 aa20.58■□□□□ 0.89
CNOT1-215ENST00000569020 BRINP3Q76B58 766 aa20.56■□□□□ 0.88
CNOT1-215ENST00000569020 SLC4A1APQ9BWU0 796 aaKnown RBP20.55■□□□□ 0.88
CNOT1-215ENST00000569020 NALCNQ8IZF0 1738 aa20.55■□□□□ 0.88
CNOT1-215ENST00000569020 VGFO15240 615 aaPredicted RBP20.54■□□□□ 0.88
CNOT1-215ENST00000569020 PPLO60437 1756 aa20.54■□□□□ 0.88
CNOT1-215ENST00000569020 MST1RQ04912 1400 aa20.53■□□□□ 0.88
CNOT1-215ENST00000569020 ASXL1Q8IXJ9 1541 aa20.53■□□□□ 0.88
CNOT1-215ENST00000569020 SETD1AO15047 1707 aaKnown RBP20.53■□□□□ 0.88
CNOT1-215ENST00000569020 MEX3CQ5U5Q3 659 aaKnown RBP20.53■□□□□ 0.88
CNOT1-215ENST00000569020 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
CNOT1-215ENST00000569020 NHSL1Q5SYE7 1610 aa20.53■□□□□ 0.88
CNOT1-215ENST00000569020 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
CNOT1-215ENST00000569020 LRP6O75581 1613 aa20.52■□□□□ 0.88
CNOT1-215ENST00000569020 RPGRIP1LQ68CZ1 1315 aa20.51■□□□□ 0.87
CNOT1-215ENST00000569020 PTCH1Q13635 1447 aa20.47■□□□□ 0.87
CNOT1-215ENST00000569020 ZNF772Q68DY9 489 aaPredicted RBP20.47■□□□□ 0.87
CNOT1-215ENST00000569020 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
CNOT1-215ENST00000569020 LRRC59Q96AG4 307 aaKnown RBP20.45■□□□□ 0.86
CNOT1-215ENST00000569020 NUTM2BA6NNL0 878 aaPredicted RBP20.44■□□□□ 0.86
CNOT1-215ENST00000569020 NUTM2EB1AL46 878 aaPredicted RBP20.44■□□□□ 0.86
CNOT1-215ENST00000569020 NUTM2AQ8IVF1 878 aaPredicted RBP20.44■□□□□ 0.86
CNOT1-215ENST00000569020 CCDC144AA2RUR9 1427 aa20.42■□□□□ 0.86
CNOT1-215ENST00000569020 PRAG1Q86YV5 1406 aa20.42■□□□□ 0.86
CNOT1-215ENST00000569020 C1orf167Q5SNV9 1468 aa20.42■□□□□ 0.86
CNOT1-215ENST00000569020 ROBO2Q9HCK4 1378 aa20.41■□□□□ 0.86
CNOT1-215ENST00000569020 DDX17Q92841 729 aaKnown RBP20.4■□□□□ 0.86
CNOT1-215ENST00000569020 IFT172Q9UG01 1749 aa20.4■□□□□ 0.86
CNOT1-215ENST00000569020 LAMC1P11047 1609 aa20.39■□□□□ 0.86
CNOT1-215ENST00000569020 MPHOSPH9Q99550 1183 aa20.38■□□□□ 0.85
CNOT1-215ENST00000569020 PNPLA6Q8IY17 1366 aa20.36■□□□□ 0.85
CNOT1-215ENST00000569020 RGL3Q3MIN7 710 aa20.36■□□□□ 0.85
CNOT1-215ENST00000569020 RXRBP28702 533 aa20.35■□□□□ 0.85
CNOT1-215ENST00000569020 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
CNOT1-215ENST00000569020 AFF2P51816 1311 aa20.34■□□□□ 0.85
CNOT1-215ENST00000569020 ADGRF5Q8IZF2 1346 aa20.34■□□□□ 0.85
CNOT1-215ENST00000569020 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
CNOT1-215ENST00000569020 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
CNOT1-215ENST00000569020 SPATA31E1Q6ZUB1 1445 aa20.34■□□□□ 0.85
CNOT1-215ENST00000569020 CDC42BPGQ6DT37 1551 aa20.34■□□□□ 0.85
CNOT1-215ENST00000569020 C8orf37Q96NL8 207 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms