RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 SLC26A8Q96RN1 970 aa31.7■■■□□ 2.67
GGA2-212ENST00000568799 LRRC7Q96NW7 1537 aa31.69■■■□□ 2.66
GGA2-212ENST00000568799 ZFYVE9O95405 1425 aa31.69■■■□□ 2.66
GGA2-212ENST00000568799 STRCP1A6NGW2 1772 aa31.66■■■□□ 2.66
GGA2-212ENST00000568799 PIP4K2BP78356 416 aa31.66■■■□□ 2.66
GGA2-212ENST00000568799 MYO5BQ9ULV0 1848 aa31.65■■■□□ 2.66
GGA2-212ENST00000568799 PLEKHG1Q9ULL1 1385 aa31.65■■■□□ 2.66
GGA2-212ENST00000568799 SPHKAPQ2M3C7 1700 aa31.63■■■□□ 2.65
GGA2-212ENST00000568799 SENP3Q9H4L4 574 aaPredicted RBP31.63■■■□□ 2.65
GGA2-212ENST00000568799 KCNA6P17658 529 aa31.62■■■□□ 2.65
GGA2-212ENST00000568799 SLC4A1APQ9BWU0 796 aaKnown RBP31.61■■■□□ 2.65
GGA2-212ENST00000568799 ZNF326Q5BKZ1 582 aaKnown RBP31.58■■■□□ 2.65
GGA2-212ENST00000568799 NUTM2DQ5VT03 806 aaPredicted RBP31.58■■■□□ 2.65
GGA2-212ENST00000568799 TRPM2O94759 1503 aa31.55■■■□□ 2.64
GGA2-212ENST00000568799 PROSER2Q86WR7 435 aaPredicted RBP31.54■■■□□ 2.64
GGA2-212ENST00000568799 TBX22Q9Y458 520 aa31.53■■■□□ 2.64
GGA2-212ENST00000568799 TMEM94Q12767 1356 aa31.51■■■□□ 2.63
GGA2-212ENST00000568799 NKTRP30414 1462 aaKnown RBP31.51■■■□□ 2.63
GGA2-212ENST00000568799 ACIN1Q9UKV3 1341 aaKnown RBP31.48■■■□□ 2.63
GGA2-212ENST00000568799 CLTCL1P53675 1640 aa31.47■■■□□ 2.63
GGA2-212ENST00000568799 NWD1Q149M9 1564 aa31.47■■■□□ 2.63
GGA2-212ENST00000568799 HSPA1LP34931 641 aa31.46■■■□□ 2.63
GGA2-212ENST00000568799 DIP2AQ14689 1571 aa31.46■■■□□ 2.63
GGA2-212ENST00000568799 ADAMTS13Q76LX8 1427 aa31.45■■■□□ 2.62
GGA2-212ENST00000568799 ALKQ9UM73 1620 aa31.43■■■□□ 2.62
GGA2-212ENST00000568799 PIK3R4Q99570 1358 aa31.43■■■□□ 2.62
GGA2-212ENST00000568799 DISP3Q9P2K9 1392 aa31.42■■■□□ 2.62
GGA2-212ENST00000568799 RBM33Q96EV2 1170 aaKnown RBP31.41■■■□□ 2.62
GGA2-212ENST00000568799 KIF1BO60333 1816 aa31.4■■■□□ 2.62
GGA2-212ENST00000568799 XIRP1Q702N8 1843 aaKnown RBP31.4■■■□□ 2.62
GGA2-212ENST00000568799 MPHOSPH9Q99550 1183 aa31.4■■■□□ 2.62
GGA2-212ENST00000568799 SETD5Q9C0A6 1442 aa31.39■■■□□ 2.62
GGA2-212ENST00000568799 MSH6P52701 1360 aa31.39■■■□□ 2.61
GGA2-212ENST00000568799 CHD2O14647 1828 aaKnown RBP31.39■■■□□ 2.61
GGA2-212ENST00000568799 FOXD1Q16676 465 aa31.38■■■□□ 2.61
GGA2-212ENST00000568799 C14orf37Q86TY3 774 aa31.35■■■□□ 2.61
GGA2-212ENST00000568799 NEXMIFQ5QGS0 1516 aa31.34■■■□□ 2.61
GGA2-212ENST00000568799 SETBP1Q9Y6X0 1596 aa31.33■■■□□ 2.61
GGA2-212ENST00000568799 CCDC144AA2RUR9 1427 aa31.33■■■□□ 2.61
GGA2-212ENST00000568799 VGFO15240 615 aaPredicted RBP31.32■■■□□ 2.61
GGA2-212ENST00000568799 AMOTL2Q9Y2J4 779 aa31.32■■■□□ 2.61
GGA2-212ENST00000568799 RPGRIP1LQ68CZ1 1315 aa31.32■■■□□ 2.6
GGA2-212ENST00000568799 NCOA3Q9Y6Q9 1424 aa31.3■■■□□ 2.6
GGA2-212ENST00000568799 RAB3GAP2Q9H2M9 1393 aa31.27■■■□□ 2.6
GGA2-212ENST00000568799 FAM135BQ49AJ0 1406 aa31.27■■■□□ 2.6
GGA2-212ENST00000568799 NRXN3Q9Y4C0 1643 aa31.27■■■□□ 2.6
GGA2-212ENST00000568799 PTPRUQ92729 1446 aa31.24■■■□□ 2.59
GGA2-212ENST00000568799 SLAIN2Q9P270 581 aa31.23■■■□□ 2.59
GGA2-212ENST00000568799 METP08581 1390 aa31.22■■■□□ 2.59
GGA2-212ENST00000568799 C19orf44Q9H6X5 657 aa31.22■■■□□ 2.59
GGA2-212ENST00000568799 ATF3P18847 181 aa31.21■■■□□ 2.59
GGA2-212ENST00000568799 RGL3Q3MIN7 710 aa31.19■■■□□ 2.58
GGA2-212ENST00000568799 CADPS2Q86UW7 1296 aa31.19■■■□□ 2.58
GGA2-212ENST00000568799 ROBO1Q9Y6N7 1651 aa31.16■■■□□ 2.58
GGA2-212ENST00000568799 XRN1Q8IZH2 1706 aaKnown RBP31.16■■■□□ 2.58
GGA2-212ENST00000568799 PPLO60437 1756 aa31.13■■■□□ 2.57
GGA2-212ENST00000568799 SPATA31E1Q6ZUB1 1445 aa31.13■■■□□ 2.57
GGA2-212ENST00000568799 ANKRD30BQ9BXX2 1392 aa31.12■■■□□ 2.57
GGA2-212ENST00000568799 MED1Q15648 1581 aaPredicted RBP31.11■■■□□ 2.57
GGA2-212ENST00000568799 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.1■■■□□ 2.57
GGA2-212ENST00000568799 HRCP23327 699 aa31.08■■■□□ 2.57
GGA2-212ENST00000568799 DCCP43146 1447 aa31.08■■■□□ 2.57
GGA2-212ENST00000568799 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.57
GGA2-212ENST00000568799 ADGRF5Q8IZF2 1346 aa31.06■■■□□ 2.56
GGA2-212ENST00000568799 ILDR2Q71H61 639 aa31.04■■■□□ 2.56
GGA2-212ENST00000568799 PTCH1Q13635 1447 aa31.04■■■□□ 2.56
GGA2-212ENST00000568799 ADGRL3Q9HAR2 1447 aa31.02■■■□□ 2.56
GGA2-212ENST00000568799 SETD1AO15047 1707 aaKnown RBP31.01■■■□□ 2.55
GGA2-212ENST00000568799 ROBO2Q9HCK4 1378 aa30.98■■■□□ 2.55
GGA2-212ENST00000568799 PHLPP1O60346 1717 aa30.98■■■□□ 2.55
GGA2-212ENST00000568799 IFT172Q9UG01 1749 aa30.97■■■□□ 2.55
GGA2-212ENST00000568799 PRAG1Q86YV5 1406 aa30.96■■■□□ 2.55
GGA2-212ENST00000568799 PIK3C2GO75747 1445 aa30.95■■■□□ 2.55
GGA2-212ENST00000568799 BRINP3Q76B58 766 aa30.94■■■□□ 2.54
GGA2-212ENST00000568799 JCADQ9P266 1359 aa30.93■■■□□ 2.54
GGA2-212ENST00000568799 MST1RQ04912 1400 aa30.93■■■□□ 2.54
GGA2-212ENST00000568799 STK26Q9P289 416 aa30.91■■■□□ 2.54
GGA2-212ENST00000568799 NALCNQ8IZF0 1738 aa30.91■■■□□ 2.54
GGA2-212ENST00000568799 MYOM2P54296 1465 aa30.89■■■□□ 2.54
GGA2-212ENST00000568799 AHDC1Q5TGY3 1603 aaPredicted RBP30.88■■■□□ 2.53
GGA2-212ENST00000568799 LRPPRCP42704 1394 aaKnown RBP30.88■■■□□ 2.53
GGA2-212ENST00000568799 TMEM132EQ6IEE7 984 aa30.88■■■□□ 2.53
GGA2-212ENST00000568799 ASXL1Q8IXJ9 1541 aa30.86■■■□□ 2.53
GGA2-212ENST00000568799 COL16A1Q07092 1604 aaPredicted RBP30.86■■■□□ 2.53
GGA2-212ENST00000568799 C14orf93Q9H972 538 aaKnown RBP30.85■■■□□ 2.53
GGA2-212ENST00000568799 SOCS7O14512 581 aa30.84■■■□□ 2.53
GGA2-212ENST00000568799 ABCC11Q96J66 1382 aa30.84■■■□□ 2.53
GGA2-212ENST00000568799 TECPR2O15040 1411 aa30.84■■■□□ 2.53
GGA2-212ENST00000568799 NRXN1Q9ULB1 1477 aa30.84■■■□□ 2.53
GGA2-212ENST00000568799 CFAP70Q5T0N1 1121 aa30.81■■■□□ 2.52
GGA2-212ENST00000568799 YTHDC2Q9H6S0 1430 aaKnown RBP30.81■■■□□ 2.52
GGA2-212ENST00000568799 C1orf167Q5SNV9 1468 aa30.81■■■□□ 2.52
GGA2-212ENST00000568799 DHX57Q6P158 1386 aaKnown RBP30.81■■■□□ 2.52
GGA2-212ENST00000568799 LAMC1P11047 1609 aa30.8■■■□□ 2.52
GGA2-212ENST00000568799 DCAF11Q8TEB1 546 aa30.8■■■□□ 2.52
GGA2-212ENST00000568799 SPATA31A6Q5VVP1 1343 aa30.79■■■□□ 2.52
GGA2-212ENST00000568799 WAPLQ7Z5K2 1190 aa30.79■■■□□ 2.52
GGA2-212ENST00000568799 STAC3Q96MF2 364 aa30.79■■■□□ 2.52
GGA2-212ENST00000568799 KDM2AQ9Y2K7 1162 aa30.78■■■□□ 2.52
GGA2-212ENST00000568799 KNDC1Q76NI1 1749 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms