RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
CYLD-213ENST00000568744 BEGAINQ9BUH8 593 aa12.07□□□□□ -0.48
CYLD-213ENST00000568744 NBPF3Q9H094 633 aa12.07□□□□□ -0.48
CYLD-213ENST00000568744 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
CYLD-213ENST00000568744 STAC3Q96MF2 364 aa12.06□□□□□ -0.48
CYLD-213ENST00000568744 TMEM134Q9H6X4 195 aa12.06□□□□□ -0.48
CYLD-213ENST00000568744 ATP1B4Q9UN42 357 aaPredicted RBP12.05□□□□□ -0.48
CYLD-213ENST00000568744 SWT1Q5T5J6 900 aaKnown RBP12.04□□□□□ -0.48
CYLD-213ENST00000568744 ADGRD1Q6QNK2 874 aa12.04□□□□□ -0.48
CYLD-213ENST00000568744 SULF1Q8IWU6 871 aa12.04□□□□□ -0.48
CYLD-213ENST00000568744 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
CYLD-213ENST00000568744 TK2O00142 265 aa12.03□□□□□ -0.48
CYLD-213ENST00000568744 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
CYLD-213ENST00000568744 RNF40O75150 1001 aa12.02□□□□□ -0.49
CYLD-213ENST00000568744 MRPL50Q8N5N7 158 aaKnown RBP12.02□□□□□ -0.49
CYLD-213ENST00000568744 SLC4A3P48751 1232 aa12□□□□□ -0.49
CYLD-213ENST00000568744 GOLGA8CPA6NN73 597 aa11.99□□□□□ -0.49
CYLD-213ENST00000568744 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
CYLD-213ENST00000568744 LAPTM4BQ86VI4 370 aa11.99□□□□□ -0.49
CYLD-213ENST00000568744 RSPH4AQ5TD94 716 aa11.98□□□□□ -0.49
CYLD-213ENST00000568744 BHMG1C9JSJ3 638 aaPredicted RBP11.97□□□□□ -0.49
CYLD-213ENST00000568744 CD46P15529 392 aa11.97□□□□□ -0.49
CYLD-213ENST00000568744 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
CYLD-213ENST00000568744 ZFRQ96KR1 1074 aaKnown RBP11.97□□□□□ -0.49
CYLD-213ENST00000568744 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
CYLD-213ENST00000568744 PCMTD1Q96MG8 357 aaPredicted RBP11.96□□□□□ -0.49
CYLD-213ENST00000568744 POLR3EQ9NVU0 708 aa11.95□□□□□ -0.5
CYLD-213ENST00000568744 SLF2Q8IX21 1173 aa11.94□□□□□ -0.5
CYLD-213ENST00000568744 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
CYLD-213ENST00000568744 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
CYLD-213ENST00000568744 HRO43593 1189 aa11.92□□□□□ -0.5
CYLD-213ENST00000568744 DIXDC1Q155Q3 683 aa11.92□□□□□ -0.5
CYLD-213ENST00000568744 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
CYLD-213ENST00000568744 SLC10A3P09131 477 aa11.91□□□□□ -0.5
CYLD-213ENST00000568744 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
CYLD-213ENST00000568744 MYSM1Q5VVJ2 828 aa11.91□□□□□ -0.5
CYLD-213ENST00000568744 SPIRE2Q8WWL2 714 aa11.91□□□□□ -0.5
CYLD-213ENST00000568744 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
CYLD-213ENST00000568744 KRTAP3-3Q9BYR6 98 aa11.9□□□□□ -0.5
CYLD-213ENST00000568744 KRTAP3-2Q9BYR7 98 aa11.9□□□□□ -0.5
CYLD-213ENST00000568744 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.9□□□□□ -0.5
CYLD-213ENST00000568744 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
CYLD-213ENST00000568744 GCGRP47871 477 aa11.88□□□□□ -0.51
CYLD-213ENST00000568744 KDM4AO75164 1064 aa11.87□□□□□ -0.51
CYLD-213ENST00000568744 CFHP08603 1231 aa11.87□□□□□ -0.51
CYLD-213ENST00000568744 CLK2P49760 499 aaKnown RBP11.87□□□□□ -0.51
CYLD-213ENST00000568744 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
CYLD-213ENST00000568744 WNT2BQ93097 391 aa11.86□□□□□ -0.51
CYLD-213ENST00000568744 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
CYLD-213ENST00000568744 RIC3Q7Z5B4 369 aa11.85□□□□□ -0.51
CYLD-213ENST00000568744 MOXD2PA6NHM9 499 aa11.84□□□□□ -0.51
CYLD-213ENST00000568744 NDUFV2P19404 249 aa11.84□□□□□ -0.51
CYLD-213ENST00000568744 BCAMP50895 628 aa11.84□□□□□ -0.51
CYLD-213ENST00000568744 HPS5Q9UPZ3 1129 aa11.84□□□□□ -0.51
CYLD-213ENST00000568744 KMT5BQ4FZB7 885 aa11.83□□□□□ -0.52
CYLD-213ENST00000568744 PPP4CP60510 307 aa11.82□□□□□ -0.52
CYLD-213ENST00000568744 C14orf37Q86TY3 774 aa11.82□□□□□ -0.52
CYLD-213ENST00000568744 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
CYLD-213ENST00000568744 LIMD1Q9UGP4 676 aa11.82□□□□□ -0.52
CYLD-213ENST00000568744 SOWAHBA6NEL2 793 aa11.81□□□□□ -0.52
CYLD-213ENST00000568744 USP46P62068 366 aa11.81□□□□□ -0.52
CYLD-213ENST00000568744 FUT2Q10981 343 aa11.8□□□□□ -0.52
CYLD-213ENST00000568744 MMRN1Q13201 1228 aa11.8□□□□□ -0.52
CYLD-213ENST00000568744 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
CYLD-213ENST00000568744 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
CYLD-213ENST00000568744 KCTD12Q96CX2 325 aaKnown RBP11.8□□□□□ -0.52
CYLD-213ENST00000568744 SPTLC1O15269 473 aa11.79□□□□□ -0.52
CYLD-213ENST00000568744 HOXA2O43364 376 aa11.79□□□□□ -0.52
CYLD-213ENST00000568744 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
CYLD-213ENST00000568744 FDX1P10109 184 aa11.78□□□□□ -0.52
CYLD-213ENST00000568744 GUCA2AQ02747 115 aa11.78□□□□□ -0.52
CYLD-213ENST00000568744 HLA-CQ95604 372 aa11.78□□□□□ -0.52
CYLD-213ENST00000568744 TSR3Q9UJK0 312 aaKnown RBP11.78□□□□□ -0.52
CYLD-213ENST00000568744 TIMELESSQ9UNS1 1208 aa11.78□□□□□ -0.52
CYLD-213ENST00000568744 NUTM2BA6NNL0 878 aaPredicted RBP11.76□□□□□ -0.53
CYLD-213ENST00000568744 NUTM2EB1AL46 878 aaPredicted RBP11.76□□□□□ -0.53
CYLD-213ENST00000568744 NUTM2DQ5VT03 806 aaPredicted RBP11.76□□□□□ -0.53
CYLD-213ENST00000568744 NUTM2AQ8IVF1 878 aaPredicted RBP11.76□□□□□ -0.53
CYLD-213ENST00000568744 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
CYLD-213ENST00000568744 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
CYLD-213ENST00000568744 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
CYLD-213ENST00000568744 PRR14Q9BWN1 585 aa11.75□□□□□ -0.53
CYLD-213ENST00000568744 PUS10Q3MIT2 529 aaKnown RBP11.74□□□□□ -0.53
CYLD-213ENST00000568744 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
CYLD-213ENST00000568744 THSD4Q6ZMP0 1018 aa11.73□□□□□ -0.53
CYLD-213ENST00000568744 ACTN4O43707 911 aaKnown RBP11.72□□□□□ -0.53
CYLD-213ENST00000568744 GJA5P36382 358 aa11.72□□□□□ -0.53
CYLD-213ENST00000568744 APLP1P51693 650 aa11.72□□□□□ -0.53
CYLD-213ENST00000568744 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
CYLD-213ENST00000568744 WBP1LQ9NX94 342 aa11.72□□□□□ -0.53
CYLD-213ENST00000568744 RFC5P40937 340 aa11.71□□□□□ -0.53
CYLD-213ENST00000568744 QPCTQ16769 361 aa11.71□□□□□ -0.53
CYLD-213ENST00000568744 PCDHGC3Q9UN70 934 aa11.71□□□□□ -0.53
CYLD-213ENST00000568744 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
CYLD-213ENST00000568744 PTPN5P54829 565 aa11.7□□□□□ -0.54
CYLD-213ENST00000568744 TUSC1Q2TAM9 212 aa11.7□□□□□ -0.54
CYLD-213ENST00000568744 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
CYLD-213ENST00000568744 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
CYLD-213ENST00000568744 LILRB3O75022 631 aa11.68□□□□□ -0.54
CYLD-213ENST00000568744 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms