RNA–Protein interactions for RNA: ENST00000568622.1

KIAA0556-208, Transcript of KIAA0556, humanhuman

TSL 2

Gene KIAA0556, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0556-208ENST00000568622 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
KIAA0556-208ENST00000568622 TMEM131LA2VDJ0 1609 aa17.36■□□□□ 0.37
KIAA0556-208ENST00000568622 ROBO1Q9Y6N7 1651 aa17.34■□□□□ 0.37
KIAA0556-208ENST00000568622 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.37
KIAA0556-208ENST00000568622 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
KIAA0556-208ENST00000568622 PROSER2Q86WR7 435 aaPredicted RBP17.32■□□□□ 0.36
KIAA0556-208ENST00000568622 RIMS2Q9UQ26 1411 aa17.31■□□□□ 0.36
KIAA0556-208ENST00000568622 ROCK1Q13464 1354 aa17.31■□□□□ 0.36
KIAA0556-208ENST00000568622 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
KIAA0556-208ENST00000568622 FAM50AQ14320 339 aaKnown RBP17.31■□□□□ 0.36
KIAA0556-208ENST00000568622 MYO5BQ9ULV0 1848 aa17.31■□□□□ 0.36
KIAA0556-208ENST00000568622 RBM33Q96EV2 1170 aaKnown RBP17.3■□□□□ 0.36
KIAA0556-208ENST00000568622 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
KIAA0556-208ENST00000568622 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
KIAA0556-208ENST00000568622 E9PCH4 1651 aa17.29■□□□□ 0.36
KIAA0556-208ENST00000568622 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
KIAA0556-208ENST00000568622 IQGAP3Q86VI3 1631 aa17.29■□□□□ 0.36
KIAA0556-208ENST00000568622 MSH6P52701 1360 aa17.28■□□□□ 0.36
KIAA0556-208ENST00000568622 DIP2AQ14689 1571 aa17.26■□□□□ 0.35
KIAA0556-208ENST00000568622 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
KIAA0556-208ENST00000568622 HDGFP51858 240 aaKnown RBP17.25■□□□□ 0.35
KIAA0556-208ENST00000568622 SLAIN2Q9P270 581 aa17.25■□□□□ 0.35
KIAA0556-208ENST00000568622 POTEAQ6S8J7 498 aa17.24■□□□□ 0.35
KIAA0556-208ENST00000568622 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
KIAA0556-208ENST00000568622 COL16A1Q07092 1604 aaPredicted RBP17.23■□□□□ 0.35
KIAA0556-208ENST00000568622 JCADQ9P266 1359 aa17.21■□□□□ 0.35
KIAA0556-208ENST00000568622 PPP1R15AO75807 674 aaPredicted RBP17.21■□□□□ 0.35
KIAA0556-208ENST00000568622 PHLPP1O60346 1717 aa17.21■□□□□ 0.35
KIAA0556-208ENST00000568622 BCANQ96GW7 911 aa17.2■□□□□ 0.34
KIAA0556-208ENST00000568622 PTPRUQ92729 1446 aa17.19■□□□□ 0.34
KIAA0556-208ENST00000568622 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
KIAA0556-208ENST00000568622 NUP155O75694 1391 aa17.18■□□□□ 0.34
KIAA0556-208ENST00000568622 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
KIAA0556-208ENST00000568622 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
KIAA0556-208ENST00000568622 TRPM2O94759 1503 aa17.17■□□□□ 0.34
KIAA0556-208ENST00000568622 SETBP1Q9Y6X0 1596 aa17.16■□□□□ 0.34
KIAA0556-208ENST00000568622 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
KIAA0556-208ENST00000568622 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
KIAA0556-208ENST00000568622 DCCP43146 1447 aa17.15■□□□□ 0.34
KIAA0556-208ENST00000568622 LRP6O75581 1613 aa17.15■□□□□ 0.34
KIAA0556-208ENST00000568622 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
KIAA0556-208ENST00000568622 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.33
KIAA0556-208ENST00000568622 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
KIAA0556-208ENST00000568622 SPATA31A6Q5VVP1 1343 aa17.13■□□□□ 0.33
KIAA0556-208ENST00000568622 AMOTL2Q9Y2J4 779 aa17.12■□□□□ 0.33
KIAA0556-208ENST00000568622 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
KIAA0556-208ENST00000568622 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
KIAA0556-208ENST00000568622 BRINP3Q76B58 766 aa17.09■□□□□ 0.33
KIAA0556-208ENST00000568622 SETD1AO15047 1707 aaKnown RBP17.09■□□□□ 0.33
KIAA0556-208ENST00000568622 NEXMIFQ5QGS0 1516 aa17.08■□□□□ 0.32
KIAA0556-208ENST00000568622 MST1RQ04912 1400 aa17.08■□□□□ 0.32
KIAA0556-208ENST00000568622 METP08581 1390 aa17.08■□□□□ 0.32
KIAA0556-208ENST00000568622 ATF3P18847 181 aa17.08■□□□□ 0.32
KIAA0556-208ENST00000568622 C14orf37Q86TY3 774 aa17.07■□□□□ 0.32
KIAA0556-208ENST00000568622 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
KIAA0556-208ENST00000568622 ASXL1Q8IXJ9 1541 aa17.06■□□□□ 0.32
KIAA0556-208ENST00000568622 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
KIAA0556-208ENST00000568622 RRBP1Q9P2E9 1410 aaKnown RBP17.06■□□□□ 0.32
KIAA0556-208ENST00000568622 NHSL1Q5SYE7 1610 aa17.05■□□□□ 0.32
KIAA0556-208ENST00000568622 ITGAEP38570 1179 aa17.04■□□□□ 0.32
KIAA0556-208ENST00000568622 NAIPQ13075 1403 aa17.04■□□□□ 0.32
KIAA0556-208ENST00000568622 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
KIAA0556-208ENST00000568622 ADGRL3Q9HAR2 1447 aa17.04■□□□□ 0.32
KIAA0556-208ENST00000568622 ZNF772Q68DY9 489 aaPredicted RBP17.02■□□□□ 0.32
KIAA0556-208ENST00000568622 NALCNQ8IZF0 1738 aa17■□□□□ 0.31
KIAA0556-208ENST00000568622 LAMC1P11047 1609 aa16.99■□□□□ 0.31
KIAA0556-208ENST00000568622 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
KIAA0556-208ENST00000568622 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
KIAA0556-208ENST00000568622 ZNF326Q5BKZ1 582 aaKnown RBP16.98■□□□□ 0.31
KIAA0556-208ENST00000568622 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
KIAA0556-208ENST00000568622 HFM1A2PYH4 1435 aa16.96■□□□□ 0.31
KIAA0556-208ENST00000568622 MEX3CQ5U5Q3 659 aaKnown RBP16.96■□□□□ 0.31
KIAA0556-208ENST00000568622 PNPLA6Q8IY17 1366 aa16.96■□□□□ 0.31
KIAA0556-208ENST00000568622 C1orf167Q5SNV9 1468 aa16.96■□□□□ 0.31
KIAA0556-208ENST00000568622 KIF1BO60333 1816 aa16.96■□□□□ 0.3
KIAA0556-208ENST00000568622 UPF1Q92900 1129 aaKnown RBP eCLIP16.95■□□□□ 0.3
KIAA0556-208ENST00000568622 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
KIAA0556-208ENST00000568622 ROBO2Q9HCK4 1378 aa16.93■□□□□ 0.3
KIAA0556-208ENST00000568622 RXRBP28702 533 aa16.92■□□□□ 0.3
KIAA0556-208ENST00000568622 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
KIAA0556-208ENST00000568622 AFF2P51816 1311 aa16.92■□□□□ 0.3
KIAA0556-208ENST00000568622 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
KIAA0556-208ENST00000568622 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
KIAA0556-208ENST00000568622 SOS2Q07890 1332 aaPredicted RBP16.91■□□□□ 0.3
KIAA0556-208ENST00000568622 NUTM2BA6NNL0 878 aaPredicted RBP16.9■□□□□ 0.3
KIAA0556-208ENST00000568622 NUTM2EB1AL46 878 aaPredicted RBP16.9■□□□□ 0.3
KIAA0556-208ENST00000568622 NUTM2AQ8IVF1 878 aaPredicted RBP16.9■□□□□ 0.3
KIAA0556-208ENST00000568622 TRIM52Q96A61 297 aa16.9■□□□□ 0.3
KIAA0556-208ENST00000568622 PPLO60437 1756 aa16.89■□□□□ 0.3
KIAA0556-208ENST00000568622 RGS12O14924 1447 aa16.87■□□□□ 0.29
KIAA0556-208ENST00000568622 ORAI2Q96SN7 254 aa16.86■□□□□ 0.29
KIAA0556-208ENST00000568622 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
KIAA0556-208ENST00000568622 COL22A1Q8NFW1 1626 aaPredicted RBP16.85■□□□□ 0.29
KIAA0556-208ENST00000568622 TECPR2O15040 1411 aa16.85■□□□□ 0.29
KIAA0556-208ENST00000568622 RBM6P78332 1123 aaKnown RBP16.84■□□□□ 0.29
KIAA0556-208ENST00000568622 C8orf37Q96NL8 207 aa16.84■□□□□ 0.29
KIAA0556-208ENST00000568622 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
KIAA0556-208ENST00000568622 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
KIAA0556-208ENST00000568622 MYOM2P54296 1465 aa16.82■□□□□ 0.28
KIAA0556-208ENST00000568622 QTRT2Q9H974 415 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms