RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 PROSER2Q86WR7 435 aaPredicted RBP29.11■■■□□ 2.25
ATP6V0C-204ENST00000568562 CHD2O14647 1828 aaKnown RBP29.06■■■□□ 2.24
ATP6V0C-204ENST00000568562 BCANQ96GW7 911 aa29.06■■■□□ 2.24
ATP6V0C-204ENST00000568562 RPRD2Q5VT52 1461 aaKnown RBP29.05■■■□□ 2.24
ATP6V0C-204ENST00000568562 SLC52A1Q9NWF4 448 aa29.05■■■□□ 2.24
ATP6V0C-204ENST00000568562 PHLPP1O60346 1717 aa29.05■■■□□ 2.24
ATP6V0C-204ENST00000568562 ZFYVE9O95405 1425 aa29.03■■■□□ 2.24
ATP6V0C-204ENST00000568562 ANKRD50Q9ULJ7 1429 aa29.03■■■□□ 2.24
ATP6V0C-204ENST00000568562 MSH6P52701 1360 aa29.02■■■□□ 2.24
ATP6V0C-204ENST00000568562 TMEM131LA2VDJ0 1609 aa29.02■■■□□ 2.24
ATP6V0C-204ENST00000568562 FAM50AQ14320 339 aaKnown RBP29.01■■■□□ 2.23
ATP6V0C-204ENST00000568562 POTEAQ6S8J7 498 aa28.99■■■□□ 2.23
ATP6V0C-204ENST00000568562 RIMS2Q9UQ26 1411 aa28.98■■■□□ 2.23
ATP6V0C-204ENST00000568562 PLEKHG1Q9ULL1 1385 aa28.98■■■□□ 2.23
ATP6V0C-204ENST00000568562 UNC13BO14795 1591 aa28.97■■■□□ 2.23
ATP6V0C-204ENST00000568562 PPP1R15AO75807 674 aaPredicted RBP28.96■■■□□ 2.23
ATP6V0C-204ENST00000568562 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
ATP6V0C-204ENST00000568562 E9PCH4 1651 aa28.95■■■□□ 2.22
ATP6V0C-204ENST00000568562 COL16A1Q07092 1604 aaPredicted RBP28.91■■■□□ 2.22
ATP6V0C-204ENST00000568562 SLAIN2Q9P270 581 aa28.91■■■□□ 2.22
ATP6V0C-204ENST00000568562 JCADQ9P266 1359 aa28.88■■■□□ 2.21
ATP6V0C-204ENST00000568562 CHGAP10645 457 aaKnown RBP28.88■■■□□ 2.21
ATP6V0C-204ENST00000568562 HDGFP51858 240 aaKnown RBP28.87■■■□□ 2.21
ATP6V0C-204ENST00000568562 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.86■■■□□ 2.21
ATP6V0C-204ENST00000568562 DIP2AQ14689 1571 aa28.86■■■□□ 2.21
ATP6V0C-204ENST00000568562 IQGAP3Q86VI3 1631 aa28.86■■■□□ 2.21
ATP6V0C-204ENST00000568562 ADAMTS13Q76LX8 1427 aa28.85■■■□□ 2.21
ATP6V0C-204ENST00000568562 NUTM2DQ5VT03 806 aaPredicted RBP28.84■■■□□ 2.21
ATP6V0C-204ENST00000568562 TBX22Q9Y458 520 aa28.83■■■□□ 2.21
ATP6V0C-204ENST00000568562 C14orf37Q86TY3 774 aa28.82■■■□□ 2.2
ATP6V0C-204ENST00000568562 NCOA3Q9Y6Q9 1424 aa28.81■■■□□ 2.2
ATP6V0C-204ENST00000568562 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.81■■■□□ 2.2
ATP6V0C-204ENST00000568562 LRP6O75581 1613 aa28.8■■■□□ 2.2
ATP6V0C-204ENST00000568562 AHDC1Q5TGY3 1603 aaPredicted RBP28.79■■■□□ 2.2
ATP6V0C-204ENST00000568562 SHPRHQ149N8 1683 aa28.77■■■□□ 2.2
ATP6V0C-204ENST00000568562 TRPM2O94759 1503 aa28.77■■■□□ 2.2
ATP6V0C-204ENST00000568562 PIK3R4Q99570 1358 aa28.75■■■□□ 2.19
ATP6V0C-204ENST00000568562 ROCK1Q13464 1354 aa28.74■■■□□ 2.19
ATP6V0C-204ENST00000568562 CADPS2Q86UW7 1296 aa28.73■■■□□ 2.19
ATP6V0C-204ENST00000568562 SPATA31A6Q5VVP1 1343 aa28.71■■■□□ 2.19
ATP6V0C-204ENST00000568562 PTPRUQ92729 1446 aa28.71■■■□□ 2.19
ATP6V0C-204ENST00000568562 ATF3P18847 181 aa28.71■■■□□ 2.19
ATP6V0C-204ENST00000568562 C19orf44Q9H6X5 657 aa28.71■■■□□ 2.19
ATP6V0C-204ENST00000568562 NRXN3Q9Y4C0 1643 aa28.71■■■□□ 2.19
ATP6V0C-204ENST00000568562 SPHKAPQ2M3C7 1700 aa28.71■■■□□ 2.19
ATP6V0C-204ENST00000568562 MEX3CQ5U5Q3 659 aaKnown RBP28.7■■■□□ 2.18
ATP6V0C-204ENST00000568562 XRN1Q8IZH2 1706 aaKnown RBP28.69■■■□□ 2.18
ATP6V0C-204ENST00000568562 NUP155O75694 1391 aa28.69■■■□□ 2.18
ATP6V0C-204ENST00000568562 AMOTL2Q9Y2J4 779 aa28.67■■■□□ 2.18
ATP6V0C-204ENST00000568562 SETBP1Q9Y6X0 1596 aa28.64■■■□□ 2.18
ATP6V0C-204ENST00000568562 ITGAEP38570 1179 aa28.63■■■□□ 2.17
ATP6V0C-204ENST00000568562 ZNF772Q68DY9 489 aaPredicted RBP28.62■■■□□ 2.17
ATP6V0C-204ENST00000568562 BRINP3Q76B58 766 aa28.62■■■□□ 2.17
ATP6V0C-204ENST00000568562 ASXL1Q8IXJ9 1541 aa28.62■■■□□ 2.17
ATP6V0C-204ENST00000568562 NHSL1Q5SYE7 1610 aa28.61■■■□□ 2.17
ATP6V0C-204ENST00000568562 DCCP43146 1447 aa28.61■■■□□ 2.17
ATP6V0C-204ENST00000568562 TRIM52Q96A61 297 aa28.61■■■□□ 2.17
ATP6V0C-204ENST00000568562 NUTM2BA6NNL0 878 aaPredicted RBP28.56■■■□□ 2.16
ATP6V0C-204ENST00000568562 NUTM2EB1AL46 878 aaPredicted RBP28.56■■■□□ 2.16
ATP6V0C-204ENST00000568562 MST1RQ04912 1400 aa28.56■■■□□ 2.16
ATP6V0C-204ENST00000568562 NUTM2AQ8IVF1 878 aaPredicted RBP28.56■■■□□ 2.16
ATP6V0C-204ENST00000568562 NALCNQ8IZF0 1738 aa28.56■■■□□ 2.16
ATP6V0C-204ENST00000568562 ZNF326Q5BKZ1 582 aaKnown RBP28.55■■■□□ 2.16
ATP6V0C-204ENST00000568562 CLTCL1P53675 1640 aa28.54■■■□□ 2.16
ATP6V0C-204ENST00000568562 METP08581 1390 aa28.53■■■□□ 2.16
ATP6V0C-204ENST00000568562 UPF1Q92900 1129 aaKnown RBP eCLIP28.52■■■□□ 2.16
ATP6V0C-204ENST00000568562 NEXMIFQ5QGS0 1516 aa28.52■■■□□ 2.16
ATP6V0C-204ENST00000568562 SETD5Q9C0A6 1442 aa28.52■■■□□ 2.16
ATP6V0C-204ENST00000568562 KIF1BO60333 1816 aa28.51■■■□□ 2.15
ATP6V0C-204ENST00000568562 RXRBP28702 533 aa28.49■■■□□ 2.15
ATP6V0C-204ENST00000568562 ADGRL3Q9HAR2 1447 aa28.49■■■□□ 2.15
ATP6V0C-204ENST00000568562 AFF2P51816 1311 aa28.47■■■□□ 2.15
ATP6V0C-204ENST00000568562 PPARGC1BQ86YN6 1023 aaKnown RBP28.47■■■□□ 2.15
ATP6V0C-204ENST00000568562 DDX17Q92841 729 aaKnown RBP28.45■■■□□ 2.14
ATP6V0C-204ENST00000568562 CDK12Q9NYV4 1490 aaPredicted RBP28.45■■■□□ 2.14
ATP6V0C-204ENST00000568562 PNPLA6Q8IY17 1366 aa28.41■■■□□ 2.14
ATP6V0C-204ENST00000568562 LRRC59Q96AG4 307 aaKnown RBP28.41■■■□□ 2.14
ATP6V0C-204ENST00000568562 C8orf37Q96NL8 207 aa28.39■■■□□ 2.14
ATP6V0C-204ENST00000568562 RGS12O14924 1447 aa28.36■■■□□ 2.13
ATP6V0C-204ENST00000568562 C1orf167Q5SNV9 1468 aa28.36■■■□□ 2.13
ATP6V0C-204ENST00000568562 LAMC1P11047 1609 aa28.36■■■□□ 2.13
ATP6V0C-204ENST00000568562 PTCH1Q13635 1447 aa28.34■■■□□ 2.13
ATP6V0C-204ENST00000568562 NAIPQ13075 1403 aa28.31■■■□□ 2.12
ATP6V0C-204ENST00000568562 PPLO60437 1756 aa28.3■■■□□ 2.12
ATP6V0C-204ENST00000568562 ROBO2Q9HCK4 1378 aa28.3■■■□□ 2.12
ATP6V0C-204ENST00000568562 QTRT2Q9H974 415 aaKnown RBP28.3■■■□□ 2.12
ATP6V0C-204ENST00000568562 ADAMTS2O95450 1211 aa28.29■■■□□ 2.12
ATP6V0C-204ENST00000568562 RBM6P78332 1123 aaKnown RBP28.28■■■□□ 2.12
ATP6V0C-204ENST00000568562 RRBP1Q9P2E9 1410 aaKnown RBP28.26■■■□□ 2.12
ATP6V0C-204ENST00000568562 NGLY1Q96IV0 654 aa28.25■■■□□ 2.11
ATP6V0C-204ENST00000568562 ORAI2Q96SN7 254 aa28.25■■■□□ 2.11
ATP6V0C-204ENST00000568562 PRAG1Q86YV5 1406 aa28.24■■■□□ 2.11
ATP6V0C-204ENST00000568562 SOS2Q07890 1332 aaPredicted RBP28.23■■■□□ 2.11
ATP6V0C-204ENST00000568562 VGFO15240 615 aaPredicted RBP28.23■■■□□ 2.11
ATP6V0C-204ENST00000568562 COL22A1Q8NFW1 1626 aaPredicted RBP28.22■■■□□ 2.11
ATP6V0C-204ENST00000568562 HFM1A2PYH4 1435 aa28.19■■■□□ 2.1
ATP6V0C-204ENST00000568562 CDC42BPGQ6DT37 1551 aa28.18■■■□□ 2.1
ATP6V0C-204ENST00000568562 MARF1Q9Y4F3 1742 aaKnown RBP28.18■■■□□ 2.1
ATP6V0C-204ENST00000568562 USP21Q9UK80 565 aa28.17■■■□□ 2.1
ATP6V0C-204ENST00000568562 RPGRIP1LQ68CZ1 1315 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms