RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-222ENST00000568444 SLIT1O75093 1534 aa20.58■□□□□ 0.89
KLHDC4-222ENST00000568444 RPGRIP1LQ68CZ1 1315 aa20.57■□□□□ 0.88
KLHDC4-222ENST00000568444 PPP1R15AO75807 674 aaPredicted RBP20.57■□□□□ 0.88
KLHDC4-222ENST00000568444 HSPA2P54652 639 aa20.57■□□□□ 0.88
KLHDC4-222ENST00000568444 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
KLHDC4-222ENST00000568444 DCAF11Q8TEB1 546 aa20.57■□□□□ 0.88
KLHDC4-222ENST00000568444 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
KLHDC4-222ENST00000568444 ARHGAP23Q9P227 1491 aa20.56■□□□□ 0.88
KLHDC4-222ENST00000568444 ZFYVE9O95405 1425 aa20.56■□□□□ 0.88
KLHDC4-222ENST00000568444 EID1Q9Y6B2 187 aa20.56■□□□□ 0.88
KLHDC4-222ENST00000568444 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
KLHDC4-222ENST00000568444 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.55■□□□□ 0.88
KLHDC4-222ENST00000568444 KDM2AQ9Y2K7 1162 aa20.55■□□□□ 0.88
KLHDC4-222ENST00000568444 POLR1AO95602 1720 aaPredicted RBP20.54■□□□□ 0.88
KLHDC4-222ENST00000568444 TXNDC2Q86VQ3 553 aa20.53■□□□□ 0.88
KLHDC4-222ENST00000568444 SCAF11Q99590 1463 aaKnown RBP20.53■□□□□ 0.88
KLHDC4-222ENST00000568444 MYOM2P54296 1465 aa20.52■□□□□ 0.88
KLHDC4-222ENST00000568444 ANKLE2Q86XL3 938 aa20.52■□□□□ 0.88
KLHDC4-222ENST00000568444 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
KLHDC4-222ENST00000568444 SENP3Q9H4L4 574 aaPredicted RBP20.51■□□□□ 0.87
KLHDC4-222ENST00000568444 TIMELESSQ9UNS1 1208 aa20.51■□□□□ 0.87
KLHDC4-222ENST00000568444 LTKP29376 864 aa20.5■□□□□ 0.87
KLHDC4-222ENST00000568444 BCANQ96GW7 911 aa20.49■□□□□ 0.87
KLHDC4-222ENST00000568444 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
KLHDC4-222ENST00000568444 NCKAP5LQ9HCH0 1330 aa20.49■□□□□ 0.87
KLHDC4-222ENST00000568444 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
KLHDC4-222ENST00000568444 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
KLHDC4-222ENST00000568444 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
KLHDC4-222ENST00000568444 PRAG1Q86YV5 1406 aa20.44■□□□□ 0.86
KLHDC4-222ENST00000568444 NRXN1Q9ULB1 1477 aa20.44■□□□□ 0.86
KLHDC4-222ENST00000568444 STRCQ7RTU9 1775 aa20.44■□□□□ 0.86
KLHDC4-222ENST00000568444 NPHP4O75161 1426 aaPredicted RBP20.44■□□□□ 0.86
KLHDC4-222ENST00000568444 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
KLHDC4-222ENST00000568444 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
KLHDC4-222ENST00000568444 MED14O60244 1454 aa20.42■□□□□ 0.86
KLHDC4-222ENST00000568444 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
KLHDC4-222ENST00000568444 ZEB1P37275 1124 aaPredicted RBP20.41■□□□□ 0.86
KLHDC4-222ENST00000568444 LAMC1P11047 1609 aa20.41■□□□□ 0.86
KLHDC4-222ENST00000568444 TRPM1Q7Z4N2 1603 aa20.38■□□□□ 0.85
KLHDC4-222ENST00000568444 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
KLHDC4-222ENST00000568444 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
KLHDC4-222ENST00000568444 NBPF8Q3BBV2 869 aa20.38■□□□□ 0.85
KLHDC4-222ENST00000568444 SLC26A8Q96RN1 970 aa20.38■□□□□ 0.85
KLHDC4-222ENST00000568444 KIAA1210Q9ULL0 1709 aa20.37■□□□□ 0.85
KLHDC4-222ENST00000568444 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
KLHDC4-222ENST00000568444 CFAP70Q5T0N1 1121 aa20.36■□□□□ 0.85
KLHDC4-222ENST00000568444 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
KLHDC4-222ENST00000568444 C14orf93Q9H972 538 aaKnown RBP20.34■□□□□ 0.85
KLHDC4-222ENST00000568444 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
KLHDC4-222ENST00000568444 ROCK2O75116 1388 aaKnown RBP20.33■□□□□ 0.84
KLHDC4-222ENST00000568444 DMRT2Q9Y5R5 561 aa20.32■□□□□ 0.84
KLHDC4-222ENST00000568444 TBX22Q9Y458 520 aa20.31■□□□□ 0.84
KLHDC4-222ENST00000568444 ASXL1Q8IXJ9 1541 aa20.31■□□□□ 0.84
KLHDC4-222ENST00000568444 NBPF1Q3BBV0 1214 aa20.29■□□□□ 0.84
KLHDC4-222ENST00000568444 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
KLHDC4-222ENST00000568444 METP08581 1390 aa20.29■□□□□ 0.84
KLHDC4-222ENST00000568444 ADGRB1O14514 1584 aa20.29■□□□□ 0.84
KLHDC4-222ENST00000568444 CARD11Q9BXL7 1154 aa20.26■□□□□ 0.83
KLHDC4-222ENST00000568444 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
KLHDC4-222ENST00000568444 STK26Q9P289 416 aa20.25■□□□□ 0.83
KLHDC4-222ENST00000568444 YTHDC2Q9H6S0 1430 aaKnown RBP20.25■□□□□ 0.83
KLHDC4-222ENST00000568444 GPRASP1Q5JY77 1395 aa20.23■□□□□ 0.83
KLHDC4-222ENST00000568444 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
KLHDC4-222ENST00000568444 PTPRUQ92729 1446 aa20.23■□□□□ 0.83
KLHDC4-222ENST00000568444 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
KLHDC4-222ENST00000568444 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
KLHDC4-222ENST00000568444 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
KLHDC4-222ENST00000568444 NWD1Q149M9 1564 aa20.21■□□□□ 0.83
KLHDC4-222ENST00000568444 TRAK1Q9UPV9 953 aa20.21■□□□□ 0.83
KLHDC4-222ENST00000568444 AMOTL2Q9Y2J4 779 aa20.21■□□□□ 0.83
KLHDC4-222ENST00000568444 CPS1P31327 1500 aa20.19■□□□□ 0.82
KLHDC4-222ENST00000568444 ARHGEF28Q8N1W1 1705 aaKnown RBP20.19■□□□□ 0.82
KLHDC4-222ENST00000568444 KCNA6P17658 529 aa20.18■□□□□ 0.82
KLHDC4-222ENST00000568444 ZNF335Q9H4Z2 1342 aaPredicted RBP20.18■□□□□ 0.82
KLHDC4-222ENST00000568444 ABCC11Q96J66 1382 aa20.18■□□□□ 0.82
KLHDC4-222ENST00000568444 STRCP1A6NGW2 1772 aa20.18■□□□□ 0.82
KLHDC4-222ENST00000568444 EIF3AQ14152 1382 aaKnown RBP20.17■□□□□ 0.82
KLHDC4-222ENST00000568444 TECPR2O15040 1411 aa20.17■□□□□ 0.82
KLHDC4-222ENST00000568444 DLC1Q96QB1 1528 aa20.17■□□□□ 0.82
KLHDC4-222ENST00000568444 USP47Q96K76 1375 aa20.16■□□□□ 0.82
KLHDC4-222ENST00000568444 NKTRP30414 1462 aaKnown RBP20.16■□□□□ 0.82
KLHDC4-222ENST00000568444 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
KLHDC4-222ENST00000568444 ROBO2Q9HCK4 1378 aa20.14■□□□□ 0.81
KLHDC4-222ENST00000568444 PRAM1Q96QH2 718 aa20.13■□□□□ 0.81
KLHDC4-222ENST00000568444 POGKQ9P215 609 aa20.13■□□□□ 0.81
KLHDC4-222ENST00000568444 EIF4G2P78344 907 aaKnown RBP eCLIP20.12■□□□□ 0.81
KLHDC4-222ENST00000568444 SAFB2Q14151 953 aaKnown RBP eCLIP20.12■□□□□ 0.81
KLHDC4-222ENST00000568444 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
KLHDC4-222ENST00000568444 QRICH2Q9H0J4 1663 aa20.11■□□□□ 0.81
KLHDC4-222ENST00000568444 WAPLQ7Z5K2 1190 aa20.11■□□□□ 0.81
KLHDC4-222ENST00000568444 PLEKHH1Q9ULM0 1364 aa20.1■□□□□ 0.81
KLHDC4-222ENST00000568444 CENPJQ9HC77 1338 aaPredicted RBP20.1■□□□□ 0.81
KLHDC4-222ENST00000568444 PROSER2Q86WR7 435 aaPredicted RBP20.1■□□□□ 0.81
KLHDC4-222ENST00000568444 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.81
KLHDC4-222ENST00000568444 HSPA5P11021 654 aaKnown RBP20.08■□□□□ 0.81
KLHDC4-222ENST00000568444 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
KLHDC4-222ENST00000568444 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.81
KLHDC4-222ENST00000568444 C14orf37Q86TY3 774 aa20.07■□□□□ 0.8
KLHDC4-222ENST00000568444 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
KLHDC4-222ENST00000568444 LTBP4Q8N2S1 1624 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms