RNA–Protein interactions for RNA: ENST00000568328.5

VWA3A-208, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-208ENST00000568328 CHIC2Q9UKJ5 165 aa15.26■□□□□ 0.03
VWA3A-208ENST00000568328 NKTRP30414 1462 aaKnown RBP15.26■□□□□ 0.03
VWA3A-208ENST00000568328 LTKP29376 864 aa15.25■□□□□ 0.03
VWA3A-208ENST00000568328 NWD1Q149M9 1564 aa15.25■□□□□ 0.03
VWA3A-208ENST00000568328 KCNA6P17658 529 aa15.25■□□□□ 0.03
VWA3A-208ENST00000568328 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.25■□□□□ 0.03
VWA3A-208ENST00000568328 ALKQ9UM73 1620 aa15.24■□□□□ 0.03
VWA3A-208ENST00000568328 IDI1Q13907 227 aa15.23■□□□□ 0.03
VWA3A-208ENST00000568328 PLEKHG1Q9ULL1 1385 aa15.21■□□□□ 0.03
VWA3A-208ENST00000568328 DIP2AQ14689 1571 aa15.21■□□□□ 0.03
VWA3A-208ENST00000568328 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
VWA3A-208ENST00000568328 FAM135BQ49AJ0 1406 aa15.21■□□□□ 0.03
VWA3A-208ENST00000568328 NCOA3Q9Y6Q9 1424 aa15.21■□□□□ 0.03
VWA3A-208ENST00000568328 IQGAP3Q86VI3 1631 aa15.21■□□□□ 0.03
VWA3A-208ENST00000568328 PHF23Q9BUL5 403 aaPredicted RBP15.19■□□□□ 0.02
VWA3A-208ENST00000568328 XIRP1Q702N8 1843 aaKnown RBP15.18■□□□□ 0.02
VWA3A-208ENST00000568328 ZFYVE9O95405 1425 aa15.18■□□□□ 0.02
VWA3A-208ENST00000568328 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
VWA3A-208ENST00000568328 PIK3R4Q99570 1358 aa15.17■□□□□ 0.02
VWA3A-208ENST00000568328 TMEM131LA2VDJ0 1609 aa15.17■□□□□ 0.02
VWA3A-208ENST00000568328 PROSER2Q86WR7 435 aaPredicted RBP15.17■□□□□ 0.02
VWA3A-208ENST00000568328 PPP1R15AO75807 674 aaPredicted RBP15.16■□□□□ 0.02
VWA3A-208ENST00000568328 MSH6P52701 1360 aa15.16■□□□□ 0.02
VWA3A-208ENST00000568328 TMEM94Q12767 1356 aa15.15■□□□□ 0.02
VWA3A-208ENST00000568328 BCANQ96GW7 911 aa15.15■□□□□ 0.02
VWA3A-208ENST00000568328 TBX22Q9Y458 520 aa15.15■□□□□ 0.02
VWA3A-208ENST00000568328 E9PCH4 1651 aa15.14■□□□□ 0.01
VWA3A-208ENST00000568328 CHD2O14647 1828 aaKnown RBP15.13■□□□□ 0.01
VWA3A-208ENST00000568328 DIEXFQ68CQ4 756 aaKnown RBP15.12■□□□□ 0.01
VWA3A-208ENST00000568328 TRPM2O94759 1503 aa15.12■□□□□ 0.01
VWA3A-208ENST00000568328 SLC26A8Q96RN1 970 aa15.1■□□□□ 0.01
VWA3A-208ENST00000568328 NUP155O75694 1391 aa15.1■□□□□ 0.01
VWA3A-208ENST00000568328 MYO5BQ9ULV0 1848 aa15.09■□□□□ 0.01
VWA3A-208ENST00000568328 ROBO1Q9Y6N7 1651 aa15.09■□□□□ 0.01
VWA3A-208ENST00000568328 CHGAP10645 457 aaKnown RBP15.07■□□□□ 0
VWA3A-208ENST00000568328 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
VWA3A-208ENST00000568328 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
VWA3A-208ENST00000568328 SETBP1Q9Y6X0 1596 aa15.04■□□□□ -0
VWA3A-208ENST00000568328 DCCP43146 1447 aa15.04■□□□□ -0
VWA3A-208ENST00000568328 ADAMTS13Q76LX8 1427 aa15.04■□□□□ -0
VWA3A-208ENST00000568328 PHLPP1O60346 1717 aa15.04■□□□□ -0
VWA3A-208ENST00000568328 RRBP1Q9P2E9 1410 aaKnown RBP15.04■□□□□ -0
VWA3A-208ENST00000568328 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
VWA3A-208ENST00000568328 SLAIN2Q9P270 581 aa15.04■□□□□ -0
VWA3A-208ENST00000568328 JCADQ9P266 1359 aa15.04■□□□□ -0
VWA3A-208ENST00000568328 C19orf44Q9H6X5 657 aa15.01□□□□□ -0.01
VWA3A-208ENST00000568328 AHDC1Q5TGY3 1603 aaPredicted RBP15.01□□□□□ -0.01
VWA3A-208ENST00000568328 ATF3P18847 181 aa15.01□□□□□ -0.01
VWA3A-208ENST00000568328 C14orf37Q86TY3 774 aa15□□□□□ -0.01
VWA3A-208ENST00000568328 SPATA31A6Q5VVP1 1343 aa14.99□□□□□ -0.01
VWA3A-208ENST00000568328 XRN1Q8IZH2 1706 aaKnown RBP14.99□□□□□ -0.01
VWA3A-208ENST00000568328 CLSPNQ9HAW4 1339 aa14.98□□□□□ -0.01
VWA3A-208ENST00000568328 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.98□□□□□ -0.01
VWA3A-208ENST00000568328 KIF1BO60333 1816 aa14.98□□□□□ -0.01
VWA3A-208ENST00000568328 ITGAEP38570 1179 aa14.97□□□□□ -0.01
VWA3A-208ENST00000568328 RPGRIP1LQ68CZ1 1315 aa14.97□□□□□ -0.01
VWA3A-208ENST00000568328 ZNF326Q5BKZ1 582 aaKnown RBP14.97□□□□□ -0.01
VWA3A-208ENST00000568328 COL16A1Q07092 1604 aaPredicted RBP14.96□□□□□ -0.01
VWA3A-208ENST00000568328 SHPRHQ149N8 1683 aa14.96□□□□□ -0.01
VWA3A-208ENST00000568328 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
VWA3A-208ENST00000568328 AMOTL2Q9Y2J4 779 aa14.96□□□□□ -0.01
VWA3A-208ENST00000568328 NAIPQ13075 1403 aa14.95□□□□□ -0.02
VWA3A-208ENST00000568328 CLTCL1P53675 1640 aa14.95□□□□□ -0.02
VWA3A-208ENST00000568328 NRXN3Q9Y4C0 1643 aa14.95□□□□□ -0.02
VWA3A-208ENST00000568328 NEXMIFQ5QGS0 1516 aa14.94□□□□□ -0.02
VWA3A-208ENST00000568328 HFM1A2PYH4 1435 aa14.94□□□□□ -0.02
VWA3A-208ENST00000568328 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
VWA3A-208ENST00000568328 PTPRUQ92729 1446 aa14.93□□□□□ -0.02
VWA3A-208ENST00000568328 VGFO15240 615 aaPredicted RBP14.92□□□□□ -0.02
VWA3A-208ENST00000568328 ZNF316A6NFI3 1004 aaPredicted RBP14.91□□□□□ -0.02
VWA3A-208ENST00000568328 ZNF772Q68DY9 489 aaPredicted RBP14.91□□□□□ -0.02
VWA3A-208ENST00000568328 RGS17Q9UGC6 210 aaPredicted RBP14.91□□□□□ -0.02
VWA3A-208ENST00000568328 ADGRL3Q9HAR2 1447 aa14.91□□□□□ -0.02
VWA3A-208ENST00000568328 PTCH1Q13635 1447 aa14.9□□□□□ -0.02
VWA3A-208ENST00000568328 RBM33Q96EV2 1170 aaKnown RBP14.9□□□□□ -0.02
VWA3A-208ENST00000568328 MEX3CQ5U5Q3 659 aaKnown RBP14.89□□□□□ -0.03
VWA3A-208ENST00000568328 ASXL1Q8IXJ9 1541 aa14.89□□□□□ -0.03
VWA3A-208ENST00000568328 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
VWA3A-208ENST00000568328 NHSL1Q5SYE7 1610 aa14.89□□□□□ -0.03
VWA3A-208ENST00000568328 SETD5Q9C0A6 1442 aa14.88□□□□□ -0.03
VWA3A-208ENST00000568328 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
VWA3A-208ENST00000568328 MST1RQ04912 1400 aa14.87□□□□□ -0.03
VWA3A-208ENST00000568328 BRINP3Q76B58 766 aa14.86□□□□□ -0.03
VWA3A-208ENST00000568328 METP08581 1390 aa14.85□□□□□ -0.03
VWA3A-208ENST00000568328 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
VWA3A-208ENST00000568328 LAMC1P11047 1609 aa14.85□□□□□ -0.03
VWA3A-208ENST00000568328 LRRC59Q96AG4 307 aaKnown RBP14.84□□□□□ -0.03
VWA3A-208ENST00000568328 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
VWA3A-208ENST00000568328 SETD1AO15047 1707 aaKnown RBP14.84□□□□□ -0.03
VWA3A-208ENST00000568328 CDK12Q9NYV4 1490 aaPredicted RBP14.84□□□□□ -0.03
VWA3A-208ENST00000568328 PPLO60437 1756 aa14.83□□□□□ -0.03
VWA3A-208ENST00000568328 NALCNQ8IZF0 1738 aa14.82□□□□□ -0.04
VWA3A-208ENST00000568328 ANKRD30BQ9BXX2 1392 aa14.82□□□□□ -0.04
VWA3A-208ENST00000568328 LRP6O75581 1613 aa14.81□□□□□ -0.04
VWA3A-208ENST00000568328 CCDC144AA2RUR9 1427 aa14.8□□□□□ -0.04
VWA3A-208ENST00000568328 C1orf167Q5SNV9 1468 aa14.79□□□□□ -0.04
VWA3A-208ENST00000568328 CDC42BPGQ6DT37 1551 aa14.78□□□□□ -0.04
VWA3A-208ENST00000568328 KNDC1Q76NI1 1749 aa14.77□□□□□ -0.04
VWA3A-208ENST00000568328 RXRBP28702 533 aa14.77□□□□□ -0.05
VWA3A-208ENST00000568328 LRPPRCP42704 1394 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms