RNA–Protein interactions for RNA: ENST00000567813.1

EDC3-213, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-213ENST00000567813 DIP2AQ14689 1571 aa9.06□□□□□ -0.96
EDC3-213ENST00000567813 MED1Q15648 1581 aaPredicted RBP9.05□□□□□ -0.96
EDC3-213ENST00000567813 PIK3R4Q99570 1358 aa9.05□□□□□ -0.96
EDC3-213ENST00000567813 KCNA6P17658 529 aa9.05□□□□□ -0.96
EDC3-213ENST00000567813 ILDR2Q71H61 639 aa9.05□□□□□ -0.96
EDC3-213ENST00000567813 SOCS7O14512 581 aa9.04□□□□□ -0.96
EDC3-213ENST00000567813 HSPA1LP34931 641 aa9.04□□□□□ -0.96
EDC3-213ENST00000567813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.04□□□□□ -0.96
EDC3-213ENST00000567813 ADAMTS13Q76LX8 1427 aa9.04□□□□□ -0.96
EDC3-213ENST00000567813 CHD2O14647 1828 aaKnown RBP9.03□□□□□ -0.96
EDC3-213ENST00000567813 FAM50AQ14320 339 aaKnown RBP9.03□□□□□ -0.96
EDC3-213ENST00000567813 RIMS2Q9UQ26 1411 aa9.03□□□□□ -0.96
EDC3-213ENST00000567813 TMEM94Q12767 1356 aa9.02□□□□□ -0.97
EDC3-213ENST00000567813 TBX22Q9Y458 520 aa9.02□□□□□ -0.97
EDC3-213ENST00000567813 MYO5BQ9ULV0 1848 aa9.02□□□□□ -0.97
EDC3-213ENST00000567813 PRAG1Q86YV5 1406 aa9.02□□□□□ -0.97
EDC3-213ENST00000567813 SETBP1Q9Y6X0 1596 aa9.02□□□□□ -0.97
EDC3-213ENST00000567813 NAIPQ13075 1403 aa9.01□□□□□ -0.97
EDC3-213ENST00000567813 NRXN3Q9Y4C0 1643 aa9.01□□□□□ -0.97
EDC3-213ENST00000567813 TRPM2O94759 1503 aa9□□□□□ -0.97
EDC3-213ENST00000567813 HFM1A2PYH4 1435 aa9□□□□□ -0.97
EDC3-213ENST00000567813 HDGFP51858 240 aaKnown RBP9□□□□□ -0.97
EDC3-213ENST00000567813 ABCF1Q8NE71 845 aaKnown RBP eCLIP9□□□□□ -0.97
EDC3-213ENST00000567813 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
EDC3-213ENST00000567813 NUP155O75694 1391 aa8.99□□□□□ -0.97
EDC3-213ENST00000567813 XRN1Q8IZH2 1706 aaKnown RBP8.99□□□□□ -0.97
EDC3-213ENST00000567813 DCCP43146 1447 aa8.98□□□□□ -0.97
EDC3-213ENST00000567813 STAG3Q9UJ98 1225 aa8.98□□□□□ -0.97
EDC3-213ENST00000567813 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
EDC3-213ENST00000567813 PIP4K2BP78356 416 aa8.97□□□□□ -0.97
EDC3-213ENST00000567813 SLC26A8Q96RN1 970 aa8.97□□□□□ -0.97
EDC3-213ENST00000567813 NEXMIFQ5QGS0 1516 aa8.96□□□□□ -0.97
EDC3-213ENST00000567813 PTPRUQ92729 1446 aa8.96□□□□□ -0.98
EDC3-213ENST00000567813 CLTCL1P53675 1640 aa8.95□□□□□ -0.98
EDC3-213ENST00000567813 AHDC1Q5TGY3 1603 aaPredicted RBP8.95□□□□□ -0.98
EDC3-213ENST00000567813 MSH6P52701 1360 aa8.95□□□□□ -0.98
EDC3-213ENST00000567813 COL16A1Q07092 1604 aaPredicted RBP8.94□□□□□ -0.98
EDC3-213ENST00000567813 PROSER2Q86WR7 435 aaPredicted RBP8.94□□□□□ -0.98
EDC3-213ENST00000567813 SETD1AO15047 1707 aaKnown RBP8.94□□□□□ -0.98
EDC3-213ENST00000567813 LAMC1P11047 1609 aa8.93□□□□□ -0.98
EDC3-213ENST00000567813 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.93□□□□□ -0.98
EDC3-213ENST00000567813 PTCH1Q13635 1447 aa8.92□□□□□ -0.98
EDC3-213ENST00000567813 C19orf44Q9H6X5 657 aa8.92□□□□□ -0.98
EDC3-213ENST00000567813 SLAIN2Q9P270 581 aa8.92□□□□□ -0.98
EDC3-213ENST00000567813 RGS17Q9UGC6 210 aaPredicted RBP8.92□□□□□ -0.98
EDC3-213ENST00000567813 SCAF1Q9H7N4 1312 aaKnown RBP8.91□□□□□ -0.98
EDC3-213ENST00000567813 METP08581 1390 aa8.9□□□□□ -0.98
EDC3-213ENST00000567813 RPGRIP1LQ68CZ1 1315 aa8.9□□□□□ -0.98
EDC3-213ENST00000567813 ACIN1Q9UKV3 1341 aaKnown RBP8.9□□□□□ -0.98
EDC3-213ENST00000567813 PPP1R15AO75807 674 aaPredicted RBP8.9□□□□□ -0.98
EDC3-213ENST00000567813 CADPS2Q86UW7 1296 aa8.9□□□□□ -0.98
EDC3-213ENST00000567813 SHPRHQ149N8 1683 aa8.9□□□□□ -0.98
EDC3-213ENST00000567813 MST1RQ04912 1400 aa8.89□□□□□ -0.99
EDC3-213ENST00000567813 SPATA31E1Q6ZUB1 1445 aa8.89□□□□□ -0.99
EDC3-213ENST00000567813 ADGRL3Q9HAR2 1447 aa8.89□□□□□ -0.99
EDC3-213ENST00000567813 KIF1BO60333 1816 aa8.89□□□□□ -0.99
EDC3-213ENST00000567813 JCADQ9P266 1359 aa8.89□□□□□ -0.99
EDC3-213ENST00000567813 NHSL1Q5SYE7 1610 aa8.89□□□□□ -0.99
EDC3-213ENST00000567813 TECPR2O15040 1411 aa8.88□□□□□ -0.99
EDC3-213ENST00000567813 SETD5Q9C0A6 1442 aa8.88□□□□□ -0.99
EDC3-213ENST00000567813 PHLPP1O60346 1717 aa8.88□□□□□ -0.99
EDC3-213ENST00000567813 AMOTL2Q9Y2J4 779 aa8.88□□□□□ -0.99
EDC3-213ENST00000567813 PPLO60437 1756 aa8.88□□□□□ -0.99
EDC3-213ENST00000567813 SPATA31A6Q5VVP1 1343 aa8.87□□□□□ -0.99
EDC3-213ENST00000567813 ASXL1Q8IXJ9 1541 aa8.87□□□□□ -0.99
EDC3-213ENST00000567813 NALCNQ8IZF0 1738 aa8.87□□□□□ -0.99
EDC3-213ENST00000567813 IFT172Q9UG01 1749 aa8.86□□□□□ -0.99
EDC3-213ENST00000567813 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
EDC3-213ENST00000567813 LRP6O75581 1613 aa8.86□□□□□ -0.99
EDC3-213ENST00000567813 NRXN1Q9ULB1 1477 aa8.85□□□□□ -0.99
EDC3-213ENST00000567813 VGFO15240 615 aaPredicted RBP8.85□□□□□ -0.99
EDC3-213ENST00000567813 ITGAEP38570 1179 aa8.85□□□□□ -0.99
EDC3-213ENST00000567813 BRINP3Q76B58 766 aa8.85□□□□□ -0.99
EDC3-213ENST00000567813 CHGAP10645 457 aaKnown RBP8.84□□□□□ -0.99
EDC3-213ENST00000567813 CDC42BPGQ6DT37 1551 aa8.84□□□□□ -0.99
EDC3-213ENST00000567813 ROBO2Q9HCK4 1378 aa8.84□□□□□ -0.99
EDC3-213ENST00000567813 PIK3C2GO75747 1445 aa8.83□□□□□ -1
EDC3-213ENST00000567813 ATF3P18847 181 aa8.83□□□□□ -1
EDC3-213ENST00000567813 NUTM2DQ5VT03 806 aaPredicted RBP8.83□□□□□ -1
EDC3-213ENST00000567813 PPARGC1BQ86YN6 1023 aaKnown RBP8.83□□□□□ -1
EDC3-213ENST00000567813 BCANQ96GW7 911 aa8.83□□□□□ -1
EDC3-213ENST00000567813 ANKRD30BQ9BXX2 1392 aa8.83□□□□□ -1
EDC3-213ENST00000567813 C1orf167Q5SNV9 1468 aa8.83□□□□□ -1
EDC3-213ENST00000567813 CDK12Q9NYV4 1490 aaPredicted RBP8.83□□□□□ -1
EDC3-213ENST00000567813 KNDC1Q76NI1 1749 aa8.83□□□□□ -1
EDC3-213ENST00000567813 POTEAQ6S8J7 498 aa8.82□□□□□ -1
EDC3-213ENST00000567813 SLC4A1APQ9BWU0 796 aaKnown RBP8.82□□□□□ -1
EDC3-213ENST00000567813 MYOM2P54296 1465 aa8.82□□□□□ -1
EDC3-213ENST00000567813 CCDC144AA2RUR9 1427 aa8.81□□□□□ -1
EDC3-213ENST00000567813 ABCC11Q96J66 1382 aa8.81□□□□□ -1
EDC3-213ENST00000567813 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
EDC3-213ENST00000567813 COL22A1Q8NFW1 1626 aaPredicted RBP8.8□□□□□ -1
EDC3-213ENST00000567813 ZNF326Q5BKZ1 582 aaKnown RBP8.8□□□□□ -1
EDC3-213ENST00000567813 PIAS4Q8N2W9 510 aaPredicted RBP8.8□□□□□ -1
EDC3-213ENST00000567813 SIRT1Q96EB6 747 aa8.8□□□□□ -1
EDC3-213ENST00000567813 LRPPRCP42704 1394 aaKnown RBP8.79□□□□□ -1
EDC3-213ENST00000567813 PNPLA6Q8IY17 1366 aa8.79□□□□□ -1
EDC3-213ENST00000567813 HRCP23327 699 aa8.79□□□□□ -1
EDC3-213ENST00000567813 MPHOSPH9Q99550 1183 aa8.79□□□□□ -1
EDC3-213ENST00000567813 LRRC59Q96AG4 307 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms