RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 NUP155O75694 1391 aa23.01■■□□□ 1.27
SCAMP2-209ENST00000567638 ILDR2Q71H61 639 aa23■■□□□ 1.27
SCAMP2-209ENST00000567638 RIMS2Q9UQ26 1411 aa22.99■■□□□ 1.27
SCAMP2-209ENST00000567638 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
SCAMP2-209ENST00000567638 SLC26A8Q96RN1 970 aa22.99■■□□□ 1.27
SCAMP2-209ENST00000567638 CHD2O14647 1828 aaKnown RBP22.98■■□□□ 1.27
SCAMP2-209ENST00000567638 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
SCAMP2-209ENST00000567638 KCNA6P17658 529 aa22.97■■□□□ 1.27
SCAMP2-209ENST00000567638 PLEKHG1Q9ULL1 1385 aa22.97■■□□□ 1.27
SCAMP2-209ENST00000567638 NKTRP30414 1462 aaKnown RBP22.97■■□□□ 1.27
SCAMP2-209ENST00000567638 TMEM94Q12767 1356 aa22.94■■□□□ 1.26
SCAMP2-209ENST00000567638 HDGFP51858 240 aaKnown RBP22.93■■□□□ 1.26
SCAMP2-209ENST00000567638 BCANQ96GW7 911 aa22.93■■□□□ 1.26
SCAMP2-209ENST00000567638 PPP1R15AO75807 674 aaPredicted RBP22.92■■□□□ 1.26
SCAMP2-209ENST00000567638 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
SCAMP2-209ENST00000567638 DIP2AQ14689 1571 aa22.91■■□□□ 1.26
SCAMP2-209ENST00000567638 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.89■■□□□ 1.25
SCAMP2-209ENST00000567638 NAIPQ13075 1403 aa22.89■■□□□ 1.25
SCAMP2-209ENST00000567638 PROSER2Q86WR7 435 aaPredicted RBP22.88■■□□□ 1.25
SCAMP2-209ENST00000567638 SENP3Q9H4L4 574 aaPredicted RBP22.88■■□□□ 1.25
SCAMP2-209ENST00000567638 ADAMTS13Q76LX8 1427 aa22.86■■□□□ 1.25
SCAMP2-209ENST00000567638 ROBO1Q9Y6N7 1651 aa22.86■■□□□ 1.25
SCAMP2-209ENST00000567638 CLTCL1P53675 1640 aa22.85■■□□□ 1.25
SCAMP2-209ENST00000567638 FAM135BQ49AJ0 1406 aa22.84■■□□□ 1.25
SCAMP2-209ENST00000567638 SOCS7O14512 581 aa22.84■■□□□ 1.25
SCAMP2-209ENST00000567638 RBM33Q96EV2 1170 aaKnown RBP22.84■■□□□ 1.25
SCAMP2-209ENST00000567638 TBX22Q9Y458 520 aa22.84■■□□□ 1.25
SCAMP2-209ENST00000567638 KIF1BO60333 1816 aa22.84■■□□□ 1.25
SCAMP2-209ENST00000567638 TRPM2O94759 1503 aa22.83■■□□□ 1.25
SCAMP2-209ENST00000567638 NUTM2DQ5VT03 806 aaPredicted RBP22.83■■□□□ 1.25
SCAMP2-209ENST00000567638 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
SCAMP2-209ENST00000567638 HFM1A2PYH4 1435 aa22.82■■□□□ 1.24
SCAMP2-209ENST00000567638 MSH6P52701 1360 aa22.81■■□□□ 1.24
SCAMP2-209ENST00000567638 PIK3R4Q99570 1358 aa22.8■■□□□ 1.24
SCAMP2-209ENST00000567638 SETBP1Q9Y6X0 1596 aa22.79■■□□□ 1.24
SCAMP2-209ENST00000567638 NCOA3Q9Y6Q9 1424 aa22.76■■□□□ 1.23
SCAMP2-209ENST00000567638 XRN1Q8IZH2 1706 aaKnown RBP22.76■■□□□ 1.23
SCAMP2-209ENST00000567638 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.76■■□□□ 1.23
SCAMP2-209ENST00000567638 NEXMIFQ5QGS0 1516 aa22.76■■□□□ 1.23
SCAMP2-209ENST00000567638 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
SCAMP2-209ENST00000567638 PTPRUQ92729 1446 aa22.73■■□□□ 1.23
SCAMP2-209ENST00000567638 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
SCAMP2-209ENST00000567638 PHF23Q9BUL5 403 aaPredicted RBP22.72■■□□□ 1.23
SCAMP2-209ENST00000567638 TRIM52Q96A61 297 aa22.7■■□□□ 1.22
SCAMP2-209ENST00000567638 SLAIN2Q9P270 581 aa22.7■■□□□ 1.22
SCAMP2-209ENST00000567638 AMOTL2Q9Y2J4 779 aa22.68■■□□□ 1.22
SCAMP2-209ENST00000567638 C14orf37Q86TY3 774 aa22.67■■□□□ 1.22
SCAMP2-209ENST00000567638 PPLO60437 1756 aa22.66■■□□□ 1.22
SCAMP2-209ENST00000567638 SETD1AO15047 1707 aaKnown RBP22.66■■□□□ 1.22
SCAMP2-209ENST00000567638 COL16A1Q07092 1604 aaPredicted RBP22.65■■□□□ 1.22
SCAMP2-209ENST00000567638 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
SCAMP2-209ENST00000567638 C19orf44Q9H6X5 657 aa22.64■■□□□ 1.21
SCAMP2-209ENST00000567638 METP08581 1390 aa22.63■■□□□ 1.21
SCAMP2-209ENST00000567638 CADPS2Q86UW7 1296 aa22.63■■□□□ 1.21
SCAMP2-209ENST00000567638 DCCP43146 1447 aa22.62■■□□□ 1.21
SCAMP2-209ENST00000567638 AHDC1Q5TGY3 1603 aaPredicted RBP22.61■■□□□ 1.21
SCAMP2-209ENST00000567638 NALCNQ8IZF0 1738 aa22.61■■□□□ 1.21
SCAMP2-209ENST00000567638 ATF3P18847 181 aa22.6■■□□□ 1.21
SCAMP2-209ENST00000567638 JCADQ9P266 1359 aa22.57■■□□□ 1.2
SCAMP2-209ENST00000567638 SHPRHQ149N8 1683 aa22.56■■□□□ 1.2
SCAMP2-209ENST00000567638 RGS17Q9UGC6 210 aaPredicted RBP22.56■■□□□ 1.2
SCAMP2-209ENST00000567638 IFT172Q9UG01 1749 aa22.56■■□□□ 1.2
SCAMP2-209ENST00000567638 RPGRIP1LQ68CZ1 1315 aa22.56■■□□□ 1.2
SCAMP2-209ENST00000567638 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
SCAMP2-209ENST00000567638 ADGRL3Q9HAR2 1447 aa22.55■■□□□ 1.2
SCAMP2-209ENST00000567638 NHSL1Q5SYE7 1610 aa22.53■■□□□ 1.2
SCAMP2-209ENST00000567638 FOXD1Q16676 465 aa22.53■■□□□ 1.2
SCAMP2-209ENST00000567638 MST1RQ04912 1400 aa22.53■■□□□ 1.2
SCAMP2-209ENST00000567638 ASXL1Q8IXJ9 1541 aa22.52■■□□□ 1.2
SCAMP2-209ENST00000567638 CCDC144AA2RUR9 1427 aa22.52■■□□□ 1.2
SCAMP2-209ENST00000567638 PTCH1Q13635 1447 aa22.52■■□□□ 1.2
SCAMP2-209ENST00000567638 PRAG1Q86YV5 1406 aa22.5■■□□□ 1.19
SCAMP2-209ENST00000567638 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
SCAMP2-209ENST00000567638 MPHOSPH9Q99550 1183 aa22.49■■□□□ 1.19
SCAMP2-209ENST00000567638 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
SCAMP2-209ENST00000567638 LRP6O75581 1613 aa22.46■■□□□ 1.19
SCAMP2-209ENST00000567638 SPATA31A6Q5VVP1 1343 aa22.45■■□□□ 1.18
SCAMP2-209ENST00000567638 ROBO2Q9HCK4 1378 aa22.45■■□□□ 1.18
SCAMP2-209ENST00000567638 SETD5Q9C0A6 1442 aa22.45■■□□□ 1.18
SCAMP2-209ENST00000567638 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
SCAMP2-209ENST00000567638 POTEAQ6S8J7 498 aa22.43■■□□□ 1.18
SCAMP2-209ENST00000567638 KNDC1Q76NI1 1749 aa22.42■■□□□ 1.18
SCAMP2-209ENST00000567638 LAMC1P11047 1609 aa22.42■■□□□ 1.18
SCAMP2-209ENST00000567638 ANKRD30BQ9BXX2 1392 aa22.41■■□□□ 1.18
SCAMP2-209ENST00000567638 C1orf167Q5SNV9 1468 aa22.41■■□□□ 1.18
SCAMP2-209ENST00000567638 ADGRF5Q8IZF2 1346 aa22.4■■□□□ 1.18
SCAMP2-209ENST00000567638 RGL3Q3MIN7 710 aa22.39■■□□□ 1.17
SCAMP2-209ENST00000567638 CDC42BPGQ6DT37 1551 aa22.38■■□□□ 1.17
SCAMP2-209ENST00000567638 PIK3C2GO75747 1445 aa22.37■■□□□ 1.17
SCAMP2-209ENST00000567638 RAB3GAP2Q9H2M9 1393 aa22.37■■□□□ 1.17
SCAMP2-209ENST00000567638 TECPR2O15040 1411 aa22.35■■□□□ 1.17
SCAMP2-209ENST00000567638 MEX3CQ5U5Q3 659 aaKnown RBP22.35■■□□□ 1.17
SCAMP2-209ENST00000567638 DDX17Q92841 729 aaKnown RBP22.33■■□□□ 1.17
SCAMP2-209ENST00000567638 LRRC59Q96AG4 307 aaKnown RBP22.32■■□□□ 1.16
SCAMP2-209ENST00000567638 LRPPRCP42704 1394 aaKnown RBP22.32■■□□□ 1.16
SCAMP2-209ENST00000567638 MYOM2P54296 1465 aa22.32■■□□□ 1.16
SCAMP2-209ENST00000567638 NRXN1Q9ULB1 1477 aa22.3■■□□□ 1.16
SCAMP2-209ENST00000567638 PNPLA6Q8IY17 1366 aa22.3■■□□□ 1.16
SCAMP2-209ENST00000567638 NUTM2BA6NNL0 878 aaPredicted RBP22.29■■□□□ 1.16
SCAMP2-209ENST00000567638 NUTM2EB1AL46 878 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms