RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 SLC26A8Q96RN1 970 aa28.33■■■□□ 2.13
LINC01238-205ENST00000567549 PLEKHG1Q9ULL1 1385 aa28.33■■■□□ 2.13
LINC01238-205ENST00000567549 ITGAEP38570 1179 aa28.32■■■□□ 2.12
LINC01238-205ENST00000567549 NUP155O75694 1391 aa28.32■■■□□ 2.12
LINC01238-205ENST00000567549 PROSER2Q86WR7 435 aaPredicted RBP28.31■■■□□ 2.12
LINC01238-205ENST00000567549 RIMS2Q9UQ26 1411 aa28.31■■■□□ 2.12
LINC01238-205ENST00000567549 TMEM131LA2VDJ0 1609 aa28.31■■■□□ 2.12
LINC01238-205ENST00000567549 E9PCH4 1651 aa28.31■■■□□ 2.12
LINC01238-205ENST00000567549 XIRP1Q702N8 1843 aaKnown RBP28.3■■■□□ 2.12
LINC01238-205ENST00000567549 ZFYVE9O95405 1425 aa28.3■■■□□ 2.12
LINC01238-205ENST00000567549 TMEM94Q12767 1356 aa28.3■■■□□ 2.12
LINC01238-205ENST00000567549 CHGAP10645 457 aaKnown RBP28.29■■■□□ 2.12
LINC01238-205ENST00000567549 PHF23Q9BUL5 403 aaPredicted RBP28.29■■■□□ 2.12
LINC01238-205ENST00000567549 MYO5BQ9ULV0 1848 aa28.29■■■□□ 2.12
LINC01238-205ENST00000567549 NWD1Q149M9 1564 aa28.28■■■□□ 2.12
LINC01238-205ENST00000567549 FAM135BQ49AJ0 1406 aa28.25■■■□□ 2.11
LINC01238-205ENST00000567549 MSH6P52701 1360 aa28.24■■■□□ 2.11
LINC01238-205ENST00000567549 DIP2AQ14689 1571 aa28.23■■■□□ 2.11
LINC01238-205ENST00000567549 TBX22Q9Y458 520 aa28.22■■■□□ 2.11
LINC01238-205ENST00000567549 CHD2O14647 1828 aaKnown RBP28.2■■■□□ 2.11
LINC01238-205ENST00000567549 SENP3Q9H4L4 574 aaPredicted RBP28.19■■■□□ 2.1
LINC01238-205ENST00000567549 PIK3R4Q99570 1358 aa28.19■■■□□ 2.1
LINC01238-205ENST00000567549 NCOA3Q9Y6Q9 1424 aa28.18■■■□□ 2.1
LINC01238-205ENST00000567549 PPARGC1BQ86YN6 1023 aaKnown RBP28.18■■■□□ 2.1
LINC01238-205ENST00000567549 RRBP1Q9P2E9 1410 aaKnown RBP28.17■■■□□ 2.1
LINC01238-205ENST00000567549 SPHKAPQ2M3C7 1700 aa28.15■■■□□ 2.1
LINC01238-205ENST00000567549 C14orf37Q86TY3 774 aa28.12■■■□□ 2.09
LINC01238-205ENST00000567549 ROBO1Q9Y6N7 1651 aa28.12■■■□□ 2.09
LINC01238-205ENST00000567549 TRPM2O94759 1503 aa28.12■■■□□ 2.09
LINC01238-205ENST00000567549 SLAIN2Q9P270 581 aa28.09■■■□□ 2.09
LINC01238-205ENST00000567549 ZNF326Q5BKZ1 582 aaKnown RBP28.07■■■□□ 2.08
LINC01238-205ENST00000567549 ADAMTS13Q76LX8 1427 aa28.07■■■□□ 2.08
LINC01238-205ENST00000567549 RBM33Q96EV2 1170 aaKnown RBP28.06■■■□□ 2.08
LINC01238-205ENST00000567549 NUTM2DQ5VT03 806 aaPredicted RBP28.05■■■□□ 2.08
LINC01238-205ENST00000567549 CADPS2Q86UW7 1296 aa28.04■■■□□ 2.08
LINC01238-205ENST00000567549 NAIPQ13075 1403 aa28.03■■■□□ 2.08
LINC01238-205ENST00000567549 C19orf44Q9H6X5 657 aa28.03■■■□□ 2.08
LINC01238-205ENST00000567549 ATF3P18847 181 aa28.02■■■□□ 2.08
LINC01238-205ENST00000567549 SETBP1Q9Y6X0 1596 aa28■■■□□ 2.07
LINC01238-205ENST00000567549 KIF1BO60333 1816 aa28■■■□□ 2.07
LINC01238-205ENST00000567549 HFM1A2PYH4 1435 aa28■■■□□ 2.07
LINC01238-205ENST00000567549 PHLPP1O60346 1717 aa27.99■■■□□ 2.07
LINC01238-205ENST00000567549 AMOTL2Q9Y2J4 779 aa27.99■■■□□ 2.07
LINC01238-205ENST00000567549 TRIM52Q96A61 297 aa27.98■■■□□ 2.07
LINC01238-205ENST00000567549 DCCP43146 1447 aa27.95■■■□□ 2.07
LINC01238-205ENST00000567549 JCADQ9P266 1359 aa27.95■■■□□ 2.06
LINC01238-205ENST00000567549 CLTCL1P53675 1640 aa27.94■■■□□ 2.06
LINC01238-205ENST00000567549 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.94■■■□□ 2.06
LINC01238-205ENST00000567549 VGFO15240 615 aaPredicted RBP27.91■■■□□ 2.06
LINC01238-205ENST00000567549 SLC4A1APQ9BWU0 796 aaKnown RBP27.91■■■□□ 2.06
LINC01238-205ENST00000567549 ACIN1Q9UKV3 1341 aaKnown RBP27.91■■■□□ 2.06
LINC01238-205ENST00000567549 XRN1Q8IZH2 1706 aaKnown RBP27.89■■■□□ 2.06
LINC01238-205ENST00000567549 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.06
LINC01238-205ENST00000567549 NEXMIFQ5QGS0 1516 aa27.88■■■□□ 2.05
LINC01238-205ENST00000567549 RPGRIP1LQ68CZ1 1315 aa27.88■■■□□ 2.05
LINC01238-205ENST00000567549 PTPRUQ92729 1446 aa27.87■■■□□ 2.05
LINC01238-205ENST00000567549 SPATA31A6Q5VVP1 1343 aa27.86■■■□□ 2.05
LINC01238-205ENST00000567549 AHDC1Q5TGY3 1603 aaPredicted RBP27.85■■■□□ 2.05
LINC01238-205ENST00000567549 COL16A1Q07092 1604 aaPredicted RBP27.84■■■□□ 2.05
LINC01238-205ENST00000567549 METP08581 1390 aa27.81■■■□□ 2.04
LINC01238-205ENST00000567549 RGS17Q9UGC6 210 aaPredicted RBP27.79■■■□□ 2.04
LINC01238-205ENST00000567549 ADGRL3Q9HAR2 1447 aa27.78■■■□□ 2.04
LINC01238-205ENST00000567549 MEX3CQ5U5Q3 659 aaKnown RBP27.77■■■□□ 2.04
LINC01238-205ENST00000567549 SHPRHQ149N8 1683 aa27.76■■■□□ 2.03
LINC01238-205ENST00000567549 BRINP3Q76B58 766 aa27.76■■■□□ 2.03
LINC01238-205ENST00000567549 CCDC144AA2RUR9 1427 aa27.75■■■□□ 2.03
LINC01238-205ENST00000567549 PTCH1Q13635 1447 aa27.75■■■□□ 2.03
LINC01238-205ENST00000567549 ASXL1Q8IXJ9 1541 aa27.73■■■□□ 2.03
LINC01238-205ENST00000567549 PPLO60437 1756 aa27.72■■■□□ 2.03
LINC01238-205ENST00000567549 MST1RQ04912 1400 aa27.72■■■□□ 2.03
LINC01238-205ENST00000567549 ZNF772Q68DY9 489 aaPredicted RBP27.71■■■□□ 2.03
LINC01238-205ENST00000567549 PRAG1Q86YV5 1406 aa27.69■■■□□ 2.02
LINC01238-205ENST00000567549 LRRC59Q96AG4 307 aaKnown RBP27.69■■■□□ 2.02
LINC01238-205ENST00000567549 NALCNQ8IZF0 1738 aa27.68■■■□□ 2.02
LINC01238-205ENST00000567549 POTEAQ6S8J7 498 aa27.68■■■□□ 2.02
LINC01238-205ENST00000567549 NHSL1Q5SYE7 1610 aa27.67■■■□□ 2.02
LINC01238-205ENST00000567549 SETD5Q9C0A6 1442 aa27.67■■■□□ 2.02
LINC01238-205ENST00000567549 ANKRD30BQ9BXX2 1392 aa27.66■■■□□ 2.02
LINC01238-205ENST00000567549 SETD1AO15047 1707 aaKnown RBP27.66■■■□□ 2.02
LINC01238-205ENST00000567549 MPHOSPH9Q99550 1183 aa27.64■■■□□ 2.02
LINC01238-205ENST00000567549 LRP6O75581 1613 aa27.6■■■□□ 2.01
LINC01238-205ENST00000567549 ROBO2Q9HCK4 1378 aa27.6■■■□□ 2.01
LINC01238-205ENST00000567549 C1orf167Q5SNV9 1468 aa27.59■■■□□ 2.01
LINC01238-205ENST00000567549 FOXD1Q16676 465 aa27.58■■■□□ 2.01
LINC01238-205ENST00000567549 NUTM2BA6NNL0 878 aaPredicted RBP27.57■■■□□ 2
LINC01238-205ENST00000567549 NUTM2EB1AL46 878 aaPredicted RBP27.57■■■□□ 2
LINC01238-205ENST00000567549 NUTM2AQ8IVF1 878 aaPredicted RBP27.57■■■□□ 2
LINC01238-205ENST00000567549 RGL3Q3MIN7 710 aa27.56■■■□□ 2
LINC01238-205ENST00000567549 SPATA31E1Q6ZUB1 1445 aa27.55■■■□□ 2
LINC01238-205ENST00000567549 LAMC1P11047 1609 aa27.53■■■□□ 2
LINC01238-205ENST00000567549 IFT172Q9UG01 1749 aa27.53■■■□□ 2
LINC01238-205ENST00000567549 CDC42BPGQ6DT37 1551 aa27.52■■■□□ 2
LINC01238-205ENST00000567549 PNPLA6Q8IY17 1366 aa27.5■■□□□ 1.99
LINC01238-205ENST00000567549 ADGRF5Q8IZF2 1346 aa27.5■■□□□ 1.99
LINC01238-205ENST00000567549 TECPR2O15040 1411 aa27.5■■□□□ 1.99
LINC01238-205ENST00000567549 RXRBP28702 533 aa27.49■■□□□ 1.99
LINC01238-205ENST00000567549 LRPPRCP42704 1394 aaKnown RBP27.48■■□□□ 1.99
LINC01238-205ENST00000567549 NPHP3Q7Z494 1330 aa27.47■■□□□ 1.99
LINC01238-205ENST00000567549 PIK3C2GO75747 1445 aa27.47■■□□□ 1.99
LINC01238-205ENST00000567549 KNDC1Q76NI1 1749 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms