RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 RIMS2Q9UQ26 1411 aa22.19■■□□□ 1.14
COMMD4-219ENST00000567399 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
COMMD4-219ENST00000567399 POLR1AO95602 1720 aaPredicted RBP22.19■■□□□ 1.14
COMMD4-219ENST00000567399 KIF1BO60333 1816 aa22.16■■□□□ 1.14
COMMD4-219ENST00000567399 RGL3Q3MIN7 710 aa22.16■■□□□ 1.14
COMMD4-219ENST00000567399 MYO5BQ9ULV0 1848 aa22.15■■□□□ 1.14
COMMD4-219ENST00000567399 MED14O60244 1454 aa22.14■■□□□ 1.13
COMMD4-219ENST00000567399 NEURL4Q96JN8 1562 aa22.13■■□□□ 1.13
COMMD4-219ENST00000567399 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
COMMD4-219ENST00000567399 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
COMMD4-219ENST00000567399 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
COMMD4-219ENST00000567399 SLC26A8Q96RN1 970 aa22.1■■□□□ 1.13
COMMD4-219ENST00000567399 RPGRIP1LQ68CZ1 1315 aa22.09■■□□□ 1.13
COMMD4-219ENST00000567399 VGFO15240 615 aaPredicted RBP22.09■■□□□ 1.13
COMMD4-219ENST00000567399 ZNF335Q9H4Z2 1342 aaPredicted RBP22.07■■□□□ 1.12
COMMD4-219ENST00000567399 PLEKHG1Q9ULL1 1385 aa22.07■■□□□ 1.12
COMMD4-219ENST00000567399 NEXMIFQ5QGS0 1516 aa22.01■■□□□ 1.11
COMMD4-219ENST00000567399 DHX57Q6P158 1386 aaKnown RBP22.01■■□□□ 1.11
COMMD4-219ENST00000567399 SPATA31E1Q6ZUB1 1445 aa22.01■■□□□ 1.11
COMMD4-219ENST00000567399 NEUROD1Q13562 356 aa22■■□□□ 1.11
COMMD4-219ENST00000567399 CERKQ8TCT0 537 aa22■■□□□ 1.11
COMMD4-219ENST00000567399 TBX22Q9Y458 520 aa22■■□□□ 1.11
COMMD4-219ENST00000567399 KDM2AQ9Y2K7 1162 aa21.98■■□□□ 1.11
COMMD4-219ENST00000567399 DCAF11Q8TEB1 546 aa21.96■■□□□ 1.11
COMMD4-219ENST00000567399 SIN3AQ96ST3 1273 aa21.96■■□□□ 1.11
COMMD4-219ENST00000567399 KCNA6P17658 529 aa21.95■■□□□ 1.1
COMMD4-219ENST00000567399 ADGRF5Q8IZF2 1346 aa21.94■■□□□ 1.1
COMMD4-219ENST00000567399 PPLO60437 1756 aa21.94■■□□□ 1.1
COMMD4-219ENST00000567399 ADAMTS13Q76LX8 1427 aa21.93■■□□□ 1.1
COMMD4-219ENST00000567399 LTBP4Q8N2S1 1624 aa21.92■■□□□ 1.1
COMMD4-219ENST00000567399 CPS1P31327 1500 aa21.92■■□□□ 1.1
COMMD4-219ENST00000567399 DIP2AQ14689 1571 aa21.91■■□□□ 1.1
COMMD4-219ENST00000567399 PROSER2Q86WR7 435 aaPredicted RBP21.91■■□□□ 1.1
COMMD4-219ENST00000567399 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
COMMD4-219ENST00000567399 STAC3Q96MF2 364 aa21.89■■□□□ 1.09
COMMD4-219ENST00000567399 PIK3R4Q99570 1358 aa21.88■■□□□ 1.09
COMMD4-219ENST00000567399 AMOTL2Q9Y2J4 779 aa21.88■■□□□ 1.09
COMMD4-219ENST00000567399 IFT172Q9UG01 1749 aa21.86■■□□□ 1.09
COMMD4-219ENST00000567399 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
COMMD4-219ENST00000567399 METP08581 1390 aa21.85■■□□□ 1.09
COMMD4-219ENST00000567399 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
COMMD4-219ENST00000567399 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
COMMD4-219ENST00000567399 MYOM2P54296 1465 aa21.84■■□□□ 1.09
COMMD4-219ENST00000567399 C14orf37Q86TY3 774 aa21.84■■□□□ 1.09
COMMD4-219ENST00000567399 RBM33Q96EV2 1170 aaKnown RBP21.83■■□□□ 1.09
COMMD4-219ENST00000567399 STRCP1A6NGW2 1772 aa21.82■■□□□ 1.08
COMMD4-219ENST00000567399 CFAP70Q5T0N1 1121 aa21.82■■□□□ 1.08
COMMD4-219ENST00000567399 L3MBTL2Q969R5 705 aa21.82■■□□□ 1.08
COMMD4-219ENST00000567399 PIK3C2GO75747 1445 aa21.81■■□□□ 1.08
COMMD4-219ENST00000567399 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
COMMD4-219ENST00000567399 CHD2O14647 1828 aaKnown RBP21.81■■□□□ 1.08
COMMD4-219ENST00000567399 TMEM132EQ6IEE7 984 aa21.81■■□□□ 1.08
COMMD4-219ENST00000567399 C14orf93Q9H972 538 aaKnown RBP21.81■■□□□ 1.08
COMMD4-219ENST00000567399 STK26Q9P289 416 aa21.81■■□□□ 1.08
COMMD4-219ENST00000567399 NKTRP30414 1462 aaKnown RBP21.8■■□□□ 1.08
COMMD4-219ENST00000567399 IQSEC2Q5JU85 1478 aa21.8■■□□□ 1.08
COMMD4-219ENST00000567399 TONSLQ96HA7 1378 aa21.8■■□□□ 1.08
COMMD4-219ENST00000567399 UBAP1LF5GYI3 381 aa21.8■■□□□ 1.08
COMMD4-219ENST00000567399 NWD1Q149M9 1564 aa21.79■■□□□ 1.08
COMMD4-219ENST00000567399 TMEM94Q12767 1356 aa21.79■■□□□ 1.08
COMMD4-219ENST00000567399 FBXO41Q8TF61 875 aa21.79■■□□□ 1.08
COMMD4-219ENST00000567399 PTPRUQ92729 1446 aa21.79■■□□□ 1.08
COMMD4-219ENST00000567399 TOM1O60784 492 aa21.77■■□□□ 1.08
COMMD4-219ENST00000567399 NRXN1Q9ULB1 1477 aa21.77■■□□□ 1.07
COMMD4-219ENST00000567399 SCAF1Q9H7N4 1312 aaKnown RBP21.76■■□□□ 1.07
COMMD4-219ENST00000567399 CLSPNQ9HAW4 1339 aa21.74■■□□□ 1.07
COMMD4-219ENST00000567399 MSH6P52701 1360 aa21.74■■□□□ 1.07
COMMD4-219ENST00000567399 PIP4K2BP78356 416 aa21.72■■□□□ 1.07
COMMD4-219ENST00000567399 LAMC1P11047 1609 aa21.72■■□□□ 1.07
COMMD4-219ENST00000567399 SETD1AO15047 1707 aaKnown RBP21.72■■□□□ 1.07
COMMD4-219ENST00000567399 LRPPRCP42704 1394 aaKnown RBP21.71■■□□□ 1.07
COMMD4-219ENST00000567399 YTHDC2Q9H6S0 1430 aaKnown RBP21.7■■□□□ 1.06
COMMD4-219ENST00000567399 XRN1Q8IZH2 1706 aaKnown RBP21.69■■□□□ 1.06
COMMD4-219ENST00000567399 ATF3P18847 181 aa21.69■■□□□ 1.06
COMMD4-219ENST00000567399 C19orf44Q9H6X5 657 aa21.69■■□□□ 1.06
COMMD4-219ENST00000567399 NCOA3Q9Y6Q9 1424 aa21.69■■□□□ 1.06
COMMD4-219ENST00000567399 ILDR1Q86SU0 546 aaPredicted RBP21.68■■□□□ 1.06
COMMD4-219ENST00000567399 TRAK1Q9UPV9 953 aa21.68■■□□□ 1.06
COMMD4-219ENST00000567399 PRAG1Q86YV5 1406 aa21.68■■□□□ 1.06
COMMD4-219ENST00000567399 ABCC11Q96J66 1382 aa21.67■■□□□ 1.06
COMMD4-219ENST00000567399 ROBO2Q9HCK4 1378 aa21.67■■□□□ 1.06
COMMD4-219ENST00000567399 POGKQ9P215 609 aa21.67■■□□□ 1.06
COMMD4-219ENST00000567399 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
COMMD4-219ENST00000567399 WAPLQ7Z5K2 1190 aa21.66■■□□□ 1.06
COMMD4-219ENST00000567399 CADPS2Q86UW7 1296 aa21.65■■□□□ 1.06
COMMD4-219ENST00000567399 ASXL1Q8IXJ9 1541 aa21.65■■□□□ 1.06
COMMD4-219ENST00000567399 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.06
COMMD4-219ENST00000567399 SAFB2Q14151 953 aaKnown RBP eCLIP21.63■■□□□ 1.05
COMMD4-219ENST00000567399 NBPF1Q3BBV0 1214 aa21.63■■□□□ 1.05
COMMD4-219ENST00000567399 SIRT1Q96EB6 747 aa21.62■■□□□ 1.05
COMMD4-219ENST00000567399 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
COMMD4-219ENST00000567399 SLAIN2Q9P270 581 aa21.6■■□□□ 1.05
COMMD4-219ENST00000567399 TIMELESSQ9UNS1 1208 aa21.6■■□□□ 1.05
COMMD4-219ENST00000567399 TECPR2O15040 1411 aa21.6■■□□□ 1.05
COMMD4-219ENST00000567399 ROCK2O75116 1388 aaKnown RBP21.6■■□□□ 1.05
COMMD4-219ENST00000567399 ADGRB1O14514 1584 aa21.59■■□□□ 1.05
COMMD4-219ENST00000567399 NBPF8Q3BBV2 869 aa21.59■■□□□ 1.05
COMMD4-219ENST00000567399 ADGRL3Q9HAR2 1447 aa21.59■■□□□ 1.05
COMMD4-219ENST00000567399 KIAA1210Q9ULL0 1709 aa21.58■■□□□ 1.05
COMMD4-219ENST00000567399 FAM135BQ49AJ0 1406 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms