RNA–Protein interactions for RNA: ENST00000566540.5

PMM2-211, Transcript of phosphomannomutase 2, humanhuman

TSL 1 (best)

Gene PMM2, Length 1,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-211ENST00000566540 STAC3Q96MF2 364 aa21.71■■□□□ 1.07
PMM2-211ENST00000566540 NRXN1Q9ULB1 1477 aa21.7■■□□□ 1.06
PMM2-211ENST00000566540 STAG3Q9UJ98 1225 aa21.7■■□□□ 1.06
PMM2-211ENST00000566540 ADGRF5Q8IZF2 1346 aa21.69■■□□□ 1.06
PMM2-211ENST00000566540 CEP170BQ9Y4F5 1589 aaPredicted RBP21.68■■□□□ 1.06
PMM2-211ENST00000566540 ZNF142P52746 1687 aaPredicted RBP21.67■■□□□ 1.06
PMM2-211ENST00000566540 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
PMM2-211ENST00000566540 TRPM1Q7Z4N2 1603 aa21.67■■□□□ 1.06
PMM2-211ENST00000566540 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
PMM2-211ENST00000566540 RIMS2Q9UQ26 1411 aa21.66■■□□□ 1.06
PMM2-211ENST00000566540 SETD1BQ9UPS6 1966 aaKnown RBP21.66■■□□□ 1.06
PMM2-211ENST00000566540 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
PMM2-211ENST00000566540 TMEM2Q9UHN6 1383 aa21.63■■□□□ 1.05
PMM2-211ENST00000566540 PIK3C2GO75747 1445 aa21.63■■□□□ 1.05
PMM2-211ENST00000566540 SLIT1O75093 1534 aa21.62■■□□□ 1.05
PMM2-211ENST00000566540 ARHGAP23Q9P227 1491 aa21.62■■□□□ 1.05
PMM2-211ENST00000566540 VGFO15240 615 aaPredicted RBP21.61■■□□□ 1.05
PMM2-211ENST00000566540 KIAA1210Q9ULL0 1709 aa21.6■■□□□ 1.05
PMM2-211ENST00000566540 NBPF1Q3BBV0 1214 aa21.58■■□□□ 1.05
PMM2-211ENST00000566540 THEMISQ8N1K5 641 aaPredicted RBP21.58■■□□□ 1.05
PMM2-211ENST00000566540 GPRASP1Q5JY77 1395 aa21.58■■□□□ 1.05
PMM2-211ENST00000566540 CFAP70Q5T0N1 1121 aa21.57■■□□□ 1.04
PMM2-211ENST00000566540 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.57■■□□□ 1.04
PMM2-211ENST00000566540 ROCK2O75116 1388 aaKnown RBP21.55■■□□□ 1.04
PMM2-211ENST00000566540 LTKP29376 864 aa21.55■■□□□ 1.04
PMM2-211ENST00000566540 C14orf93Q9H972 538 aaKnown RBP21.55■■□□□ 1.04
PMM2-211ENST00000566540 LAMC1P11047 1609 aa21.54■■□□□ 1.04
PMM2-211ENST00000566540 NRXN3Q9Y4C0 1643 aa21.53■■□□□ 1.04
PMM2-211ENST00000566540 HDGFP51858 240 aaKnown RBP21.53■■□□□ 1.04
PMM2-211ENST00000566540 CARD11Q9BXL7 1154 aa21.52■■□□□ 1.04
PMM2-211ENST00000566540 ADGRB1O14514 1584 aa21.51■■□□□ 1.03
PMM2-211ENST00000566540 SETBP1Q9Y6X0 1596 aa21.51■■□□□ 1.03
PMM2-211ENST00000566540 TXNDC2Q86VQ3 553 aa21.51■■□□□ 1.03
PMM2-211ENST00000566540 ALKQ9UM73 1620 aa21.51■■□□□ 1.03
PMM2-211ENST00000566540 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
PMM2-211ENST00000566540 IQGAP1P46940 1657 aa21.49■■□□□ 1.03
PMM2-211ENST00000566540 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
PMM2-211ENST00000566540 SETD1AO15047 1707 aaKnown RBP21.49■■□□□ 1.03
PMM2-211ENST00000566540 PLEKHG1Q9ULL1 1385 aa21.49■■□□□ 1.03
PMM2-211ENST00000566540 SCAF11Q99590 1463 aaKnown RBP21.49■■□□□ 1.03
PMM2-211ENST00000566540 HSPA5P11021 654 aaKnown RBP21.48■■□□□ 1.03
PMM2-211ENST00000566540 EID1Q9Y6B2 187 aa21.48■■□□□ 1.03
PMM2-211ENST00000566540 USP47Q96K76 1375 aa21.48■■□□□ 1.03
PMM2-211ENST00000566540 EIF4G2P78344 907 aaKnown RBP eCLIP21.46■■□□□ 1.03
PMM2-211ENST00000566540 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.03
PMM2-211ENST00000566540 ADAMTS13Q76LX8 1427 aa21.45■■□□□ 1.03
PMM2-211ENST00000566540 HIRIP3Q9BW71 556 aaPredicted RBP21.45■■□□□ 1.02
PMM2-211ENST00000566540 ZNF316A6NFI3 1004 aaPredicted RBP21.44■■□□□ 1.02
PMM2-211ENST00000566540 TMEM132EQ6IEE7 984 aa21.44■■□□□ 1.02
PMM2-211ENST00000566540 MED14O60244 1454 aa21.44■■□□□ 1.02
PMM2-211ENST00000566540 ANKLE2Q86XL3 938 aa21.43■■□□□ 1.02
PMM2-211ENST00000566540 POLR1AO95602 1720 aaPredicted RBP21.4■■□□□ 1.02
PMM2-211ENST00000566540 METP08581 1390 aa21.4■■□□□ 1.02
PMM2-211ENST00000566540 HSPA2P54652 639 aa21.38■■□□□ 1.01
PMM2-211ENST00000566540 YTHDC2Q9H6S0 1430 aaKnown RBP21.37■■□□□ 1.01
PMM2-211ENST00000566540 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
PMM2-211ENST00000566540 BCANQ96GW7 911 aa21.37■■□□□ 1.01
PMM2-211ENST00000566540 DIP2AQ14689 1571 aa21.37■■□□□ 1.01
PMM2-211ENST00000566540 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
PMM2-211ENST00000566540 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
PMM2-211ENST00000566540 TBX22Q9Y458 520 aa21.36■■□□□ 1.01
PMM2-211ENST00000566540 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
PMM2-211ENST00000566540 ARHGEF28Q8N1W1 1705 aaKnown RBP21.34■■□□□ 1.01
PMM2-211ENST00000566540 LRPPRCP42704 1394 aaKnown RBP21.34■■□□□ 1.01
PMM2-211ENST00000566540 TRAK1Q9UPV9 953 aa21.34■■□□□ 1.01
PMM2-211ENST00000566540 TESK2Q96S53 571 aa21.32■■□□□ 1
PMM2-211ENST00000566540 EIF3AQ14152 1382 aaKnown RBP21.32■■□□□ 1
PMM2-211ENST00000566540 PTPRUQ92729 1446 aa21.32■■□□□ 1
PMM2-211ENST00000566540 STK26Q9P289 416 aa21.31■■□□□ 1
PMM2-211ENST00000566540 ABCC11Q96J66 1382 aa21.31■■□□□ 1
PMM2-211ENST00000566540 C11orf95C9JLR9 678 aaPredicted RBP21.31■■□□□ 1
PMM2-211ENST00000566540 DLC1Q96QB1 1528 aa21.31■■□□□ 1
PMM2-211ENST00000566540 KNDC1Q76NI1 1749 aa21.3■■□□□ 1
PMM2-211ENST00000566540 STRCQ7RTU9 1775 aa21.29■■□□□ 1
PMM2-211ENST00000566540 TECPR2O15040 1411 aa21.29■■□□□ 1
PMM2-211ENST00000566540 CPS1P31327 1500 aa21.27■■□□□ 1
PMM2-211ENST00000566540 CENPJQ9HC77 1338 aaPredicted RBP21.27■□□□□ 0.99
PMM2-211ENST00000566540 PIK3R4Q99570 1358 aa21.27■□□□□ 0.99
PMM2-211ENST00000566540 XRN1Q8IZH2 1706 aaKnown RBP21.26■□□□□ 0.99
PMM2-211ENST00000566540 QRICH2Q9H0J4 1663 aa21.26■□□□□ 0.99
PMM2-211ENST00000566540 WASHC2AQ641Q2 1341 aa21.25■□□□□ 0.99
PMM2-211ENST00000566540 SBNO2Q9Y2G9 1366 aa21.24■□□□□ 0.99
PMM2-211ENST00000566540 SIRT1Q96EB6 747 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 PRAM1Q96QH2 718 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 CHD2O14647 1828 aaKnown RBP21.23■□□□□ 0.99
PMM2-211ENST00000566540 CCDC7Q96M83 1385 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 ROBO2Q9HCK4 1378 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 DISP3Q9P2K9 1392 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 PLEKHH1Q9ULM0 1364 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 KIF7Q2M1P5 1343 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 AMOTL2Q9Y2J4 779 aa21.23■□□□□ 0.99
PMM2-211ENST00000566540 FAM135BQ49AJ0 1406 aa21.22■□□□□ 0.99
PMM2-211ENST00000566540 WAPLQ7Z5K2 1190 aa21.21■□□□□ 0.99
PMM2-211ENST00000566540 PTCH1Q13635 1447 aa21.19■□□□□ 0.98
PMM2-211ENST00000566540 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
PMM2-211ENST00000566540 POGKQ9P215 609 aa21.19■□□□□ 0.98
PMM2-211ENST00000566540 NWD1Q149M9 1564 aa21.18■□□□□ 0.98
PMM2-211ENST00000566540 TMF1P82094 1093 aa21.18■□□□□ 0.98
PMM2-211ENST00000566540 KCNA6P17658 529 aa21.17■□□□□ 0.98
PMM2-211ENST00000566540 TULP4Q9NRJ4 1543 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms