RNA–Protein interactions for RNA: ENST00000566401.1

YPEL3-208, Transcript of yippee like 3, human

TSL 3

Gene YPEL3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YPEL3-208	ENST00000566401	ITGAE	P38570	1179 aa		29.49	■■■□□ 2.31
YPEL3-208	ENST00000566401	ROCK1	Q13464	1354 aa		29.49	■■■□□ 2.31
YPEL3-208	ENST00000566401	UNC13B	O14795	1591 aa		29.47	■■■□□ 2.31
YPEL3-208	ENST00000566401	ZFYVE9	O95405	1425 aa		29.46	■■■□□ 2.31
YPEL3-208	ENST00000566401	GCC2	Q8IWJ2	1684 aa		29.45	■■■□□ 2.31
YPEL3-208	ENST00000566401	CHGA	P10645	457 aa	Known RBP	29.45	■■■□□ 2.31
YPEL3-208	ENST00000566401	RIMS2	Q9UQ26	1411 aa		29.45	■■■□□ 2.3
YPEL3-208	ENST00000566401	PHF23	Q9BUL5	403 aa	Predicted RBP	29.44	■■■□□ 2.3
YPEL3-208	ENST00000566401	TMEM131L	A2VDJ0	1609 aa		29.44	■■■□□ 2.3
YPEL3-208	ENST00000566401	PLEKHG1	Q9ULL1	1385 aa		29.42	■■■□□ 2.3
YPEL3-208	ENST00000566401		E9PCH4	1651 aa		29.42	■■■□□ 2.3
YPEL3-208	ENST00000566401	PPP1R15A	O75807	674 aa	Predicted RBP	29.42	■■■□□ 2.3
YPEL3-208	ENST00000566401	HDGF	P51858	240 aa	Known RBP	29.42	■■■□□ 2.3
YPEL3-208	ENST00000566401	FAM135B	Q49AJ0	1406 aa		29.42	■■■□□ 2.3
YPEL3-208	ENST00000566401	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.41	■■■□□ 2.3
YPEL3-208	ENST00000566401	NUP155	O75694	1391 aa		29.4	■■■□□ 2.3
YPEL3-208	ENST00000566401	NWD1	Q149M9	1564 aa		29.38	■■■□□ 2.29
YPEL3-208	ENST00000566401	NKTR	P30414	1462 aa	Known RBP	29.36	■■■□□ 2.29
YPEL3-208	ENST00000566401	IQGAP3	Q86VI3	1631 aa		29.36	■■■□□ 2.29
YPEL3-208	ENST00000566401	TBX22	Q9Y458	520 aa		29.36	■■■□□ 2.29
YPEL3-208	ENST00000566401	CHD2	O14647	1828 aa	Known RBP	29.36	■■■□□ 2.29
YPEL3-208	ENST00000566401	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.35	■■■□□ 2.29
YPEL3-208	ENST00000566401	SLAIN2	Q9P270	581 aa		29.31	■■■□□ 2.28
YPEL3-208	ENST00000566401	RGS17	Q9UGC6	210 aa	Predicted RBP	29.31	■■■□□ 2.28
YPEL3-208	ENST00000566401	ROBO1	Q9Y6N7	1651 aa		29.31	■■■□□ 2.28
YPEL3-208	ENST00000566401	MSH6	P52701	1360 aa		29.3	■■■□□ 2.28
YPEL3-208	ENST00000566401	ADAMTS13	Q76LX8	1427 aa		29.29	■■■□□ 2.28
YPEL3-208	ENST00000566401	C14orf37	Q86TY3	774 aa		29.2	■■■□□ 2.26
YPEL3-208	ENST00000566401	AMOTL2	Q9Y2J4	779 aa		29.18	■■■□□ 2.26
YPEL3-208	ENST00000566401	PIK3R4	Q99570	1358 aa		29.17	■■■□□ 2.26
YPEL3-208	ENST00000566401	NCOA3	Q9Y6Q9	1424 aa		29.17	■■■□□ 2.26
YPEL3-208	ENST00000566401	PTPRU	Q92729	1446 aa		29.16	■■■□□ 2.26
YPEL3-208	ENST00000566401	DIP2A	Q14689	1571 aa		29.15	■■■□□ 2.26
YPEL3-208	ENST00000566401	C19orf44	Q9H6X5	657 aa		29.15	■■■□□ 2.26
YPEL3-208	ENST00000566401	SPHKAP	Q2M3C7	1700 aa		29.14	■■■□□ 2.26
YPEL3-208	ENST00000566401	RRBP1	Q9P2E9	1410 aa	Known RBP	29.14	■■■□□ 2.26
YPEL3-208	ENST00000566401	ZNF326	Q5BKZ1	582 aa	Known RBP	29.14	■■■□□ 2.26
YPEL3-208	ENST00000566401	POTEA	Q6S8J7	498 aa		29.13	■■■□□ 2.25
YPEL3-208	ENST00000566401	PHLPP1	O60346	1717 aa		29.13	■■■□□ 2.25
YPEL3-208	ENST00000566401	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.11	■■■□□ 2.25
YPEL3-208	ENST00000566401	TRPM2	O94759	1503 aa		29.1	■■■□□ 2.25
YPEL3-208	ENST00000566401	ATF3	P18847	181 aa		29.1	■■■□□ 2.25
YPEL3-208	ENST00000566401	CADPS2	Q86UW7	1296 aa		29.1	■■■□□ 2.25
YPEL3-208	ENST00000566401	NAIP	Q13075	1403 aa		29.1	■■■□□ 2.25
YPEL3-208	ENST00000566401	NRXN3	Q9Y4C0	1643 aa		29.08	■■■□□ 2.25
YPEL3-208	ENST00000566401	JCAD	Q9P266	1359 aa		29.07	■■■□□ 2.24
YPEL3-208	ENST00000566401	MET	P08581	1390 aa		29.05	■■■□□ 2.24
YPEL3-208	ENST00000566401	CLTCL1	P53675	1640 aa		29.04	■■■□□ 2.24
YPEL3-208	ENST00000566401	SETBP1	Q9Y6X0	1596 aa		29.04	■■■□□ 2.24
YPEL3-208	ENST00000566401	COL16A1	Q07092	1604 aa	Predicted RBP	29.03	■■■□□ 2.24
YPEL3-208	ENST00000566401	TRIM52	Q96A61	297 aa		29.02	■■■□□ 2.24
YPEL3-208	ENST00000566401	BRINP3	Q76B58	766 aa		29	■■■□□ 2.23
YPEL3-208	ENST00000566401	XRN1	Q8IZH2	1706 aa	Known RBP	28.99	■■■□□ 2.23
YPEL3-208	ENST00000566401	NEXMIF	Q5QGS0	1516 aa		28.98	■■■□□ 2.23
YPEL3-208	ENST00000566401	KIF1B	O60333	1816 aa		28.96	■■■□□ 2.23
YPEL3-208	ENST00000566401	HFM1	A2PYH4	1435 aa		28.94	■■■□□ 2.22
YPEL3-208	ENST00000566401	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.94	■■■□□ 2.22
YPEL3-208	ENST00000566401	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.93	■■■□□ 2.22
YPEL3-208	ENST00000566401	SPATA31A6	Q5VVP1	1343 aa		28.93	■■■□□ 2.22
YPEL3-208	ENST00000566401	LRP6	O75581	1613 aa		28.92	■■■□□ 2.22
YPEL3-208	ENST00000566401	DCC	P43146	1447 aa		28.92	■■■□□ 2.22
YPEL3-208	ENST00000566401	MST1R	Q04912	1400 aa		28.9	■■■□□ 2.22
YPEL3-208	ENST00000566401	VGF	O15240	615 aa	Predicted RBP	28.88	■■■□□ 2.21
YPEL3-208	ENST00000566401	FOXD1	Q16676	465 aa		28.87	■■■□□ 2.21
YPEL3-208	ENST00000566401	MEX3C	Q5U5Q3	659 aa	Known RBP	28.87	■■■□□ 2.21
YPEL3-208	ENST00000566401	ASXL1	Q8IXJ9	1541 aa		28.85	■■■□□ 2.21
YPEL3-208	ENST00000566401	DDX17	Q92841	729 aa	Known RBP	28.85	■■■□□ 2.21
YPEL3-208	ENST00000566401	SHPRH	Q149N8	1683 aa		28.85	■■■□□ 2.21
YPEL3-208	ENST00000566401	ADGRL3	Q9HAR2	1447 aa		28.85	■■■□□ 2.21
YPEL3-208	ENST00000566401	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.84	■■■□□ 2.21
YPEL3-208	ENST00000566401	NUTM2E	B1AL46	878 aa	Predicted RBP	28.84	■■■□□ 2.21
YPEL3-208	ENST00000566401	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.84	■■■□□ 2.21
YPEL3-208	ENST00000566401	RPGRIP1L	Q68CZ1	1315 aa		28.83	■■■□□ 2.21
YPEL3-208	ENST00000566401	NALCN	Q8IZF0	1738 aa		28.8	■■■□□ 2.2
YPEL3-208	ENST00000566401	ROBO2	Q9HCK4	1378 aa		28.8	■■■□□ 2.2
YPEL3-208	ENST00000566401	SETD5	Q9C0A6	1442 aa		28.79	■■■□□ 2.2
YPEL3-208	ENST00000566401	ZNF772	Q68DY9	489 aa	Predicted RBP	28.79	■■■□□ 2.2
YPEL3-208	ENST00000566401	SETD1A	O15047	1707 aa	Known RBP	28.79	■■■□□ 2.2
YPEL3-208	ENST00000566401	LRRC59	Q96AG4	307 aa	Known RBP	28.78	■■■□□ 2.2
YPEL3-208	ENST00000566401	NHSL1	Q5SYE7	1610 aa		28.76	■■■□□ 2.2
YPEL3-208	ENST00000566401	PPL	O60437	1756 aa		28.75	■■■□□ 2.19
YPEL3-208	ENST00000566401	C1orf167	Q5SNV9	1468 aa		28.74	■■■□□ 2.19
YPEL3-208	ENST00000566401	PTCH1	Q13635	1447 aa		28.74	■■■□□ 2.19
YPEL3-208	ENST00000566401	ORAI2	Q96SN7	254 aa		28.73	■■■□□ 2.19
YPEL3-208	ENST00000566401	RGL3	Q3MIN7	710 aa		28.72	■■■□□ 2.19
YPEL3-208	ENST00000566401	MPHOSPH9	Q99550	1183 aa		28.72	■■■□□ 2.19
YPEL3-208	ENST00000566401	ADGRF5	Q8IZF2	1346 aa		28.71	■■■□□ 2.19
YPEL3-208	ENST00000566401	PNPLA6	Q8IY17	1366 aa		28.69	■■■□□ 2.18
YPEL3-208	ENST00000566401	AFF2	P51816	1311 aa		28.69	■■■□□ 2.18
YPEL3-208	ENST00000566401	RXRB	P28702	533 aa		28.67	■■■□□ 2.18
YPEL3-208	ENST00000566401	PRAG1	Q86YV5	1406 aa		28.67	■■■□□ 2.18
YPEL3-208	ENST00000566401	CCDC144A	A2RUR9	1427 aa		28.66	■■■□□ 2.18
YPEL3-208	ENST00000566401	SPATA31E1	Q6ZUB1	1445 aa		28.64	■■■□□ 2.18
YPEL3-208	ENST00000566401	C8orf37	Q96NL8	207 aa		28.63	■■■□□ 2.17
YPEL3-208	ENST00000566401	STK26	Q9P289	416 aa		28.63	■■■□□ 2.17
YPEL3-208	ENST00000566401	SOS2	Q07890	1332 aa	Predicted RBP	28.63	■■■□□ 2.17
YPEL3-208	ENST00000566401	WAPL	Q7Z5K2	1190 aa		28.61	■■■□□ 2.17
YPEL3-208	ENST00000566401	ADAMTS2	O95450	1211 aa		28.6	■■■□□ 2.17
YPEL3-208	ENST00000566401	TMEM132E	Q6IEE7	984 aa		28.6	■■■□□ 2.17
YPEL3-208	ENST00000566401	LAMC1	P11047	1609 aa		28.59	■■■□□ 2.17

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms