RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SLC26A8Q96RN1 970 aa30.64■■■□□ 2.5
CLN6-207ENST00000566347 RIMS2Q9UQ26 1411 aa30.64■■■□□ 2.49
CLN6-207ENST00000566347 KCNA6P17658 529 aa30.63■■■□□ 2.49
CLN6-207ENST00000566347 BCANQ96GW7 911 aa30.62■■■□□ 2.49
CLN6-207ENST00000566347 PPP1R15AO75807 674 aaPredicted RBP30.61■■■□□ 2.49
CLN6-207ENST00000566347 PLEKHG1Q9ULL1 1385 aa30.61■■■□□ 2.49
CLN6-207ENST00000566347 CHGAP10645 457 aaKnown RBP30.6■■■□□ 2.49
CLN6-207ENST00000566347 XIRP1Q702N8 1843 aaKnown RBP30.6■■■□□ 2.49
CLN6-207ENST00000566347 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.59■■■□□ 2.49
CLN6-207ENST00000566347 NWD1Q149M9 1564 aa30.56■■■□□ 2.48
CLN6-207ENST00000566347 NKTRP30414 1462 aaKnown RBP30.56■■■□□ 2.48
CLN6-207ENST00000566347 NAIPQ13075 1403 aa30.55■■■□□ 2.48
CLN6-207ENST00000566347 TMEM94Q12767 1356 aa30.54■■■□□ 2.48
CLN6-207ENST00000566347 SPHKAPQ2M3C7 1700 aa30.53■■■□□ 2.48
CLN6-207ENST00000566347 PROSER2Q86WR7 435 aaPredicted RBP30.52■■■□□ 2.48
CLN6-207ENST00000566347 ILDR2Q71H61 639 aa30.49■■■□□ 2.47
CLN6-207ENST00000566347 TBX22Q9Y458 520 aa30.49■■■□□ 2.47
CLN6-207ENST00000566347 SENP3Q9H4L4 574 aaPredicted RBP30.48■■■□□ 2.47
CLN6-207ENST00000566347 HFM1A2PYH4 1435 aa30.47■■■□□ 2.47
CLN6-207ENST00000566347 CHD2O14647 1828 aaKnown RBP30.47■■■□□ 2.47
CLN6-207ENST00000566347 DIP2AQ14689 1571 aa30.46■■■□□ 2.47
CLN6-207ENST00000566347 NUTM2DQ5VT03 806 aaPredicted RBP30.44■■■□□ 2.46
CLN6-207ENST00000566347 MED1Q15648 1581 aaPredicted RBP30.42■■■□□ 2.46
CLN6-207ENST00000566347 ADAMTS13Q76LX8 1427 aa30.42■■■□□ 2.46
CLN6-207ENST00000566347 FAM135BQ49AJ0 1406 aa30.41■■■□□ 2.46
CLN6-207ENST00000566347 PIK3R4Q99570 1358 aa30.41■■■□□ 2.46
CLN6-207ENST00000566347 RBM33Q96EV2 1170 aaKnown RBP30.4■■■□□ 2.46
CLN6-207ENST00000566347 TRPM2O94759 1503 aa30.4■■■□□ 2.46
CLN6-207ENST00000566347 MSH6P52701 1360 aa30.4■■■□□ 2.46
CLN6-207ENST00000566347 TRIM52Q96A61 297 aa30.37■■■□□ 2.45
CLN6-207ENST00000566347 ZNF326Q5BKZ1 582 aaKnown RBP30.36■■■□□ 2.45
CLN6-207ENST00000566347 CLTCL1P53675 1640 aa30.36■■■□□ 2.45
CLN6-207ENST00000566347 NCOA3Q9Y6Q9 1424 aa30.35■■■□□ 2.45
CLN6-207ENST00000566347 SOCS7O14512 581 aa30.32■■■□□ 2.44
CLN6-207ENST00000566347 KIF1BO60333 1816 aa30.31■■■□□ 2.44
CLN6-207ENST00000566347 ROBO1Q9Y6N7 1651 aa30.31■■■□□ 2.44
CLN6-207ENST00000566347 SETBP1Q9Y6X0 1596 aa30.31■■■□□ 2.44
CLN6-207ENST00000566347 SLC4A1APQ9BWU0 796 aaKnown RBP30.29■■■□□ 2.44
CLN6-207ENST00000566347 NRXN3Q9Y4C0 1643 aa30.29■■■□□ 2.44
CLN6-207ENST00000566347 SLAIN2Q9P270 581 aa30.27■■■□□ 2.44
CLN6-207ENST00000566347 NEXMIFQ5QGS0 1516 aa30.27■■■□□ 2.44
CLN6-207ENST00000566347 C14orf37Q86TY3 774 aa30.26■■■□□ 2.43
CLN6-207ENST00000566347 AMOTL2Q9Y2J4 779 aa30.26■■■□□ 2.43
CLN6-207ENST00000566347 PHF23Q9BUL5 403 aaPredicted RBP30.24■■■□□ 2.43
CLN6-207ENST00000566347 PTPRUQ92729 1446 aa30.23■■■□□ 2.43
CLN6-207ENST00000566347 C19orf44Q9H6X5 657 aa30.21■■■□□ 2.43
CLN6-207ENST00000566347 XRN1Q8IZH2 1706 aaKnown RBP30.2■■■□□ 2.43
CLN6-207ENST00000566347 CADPS2Q86UW7 1296 aa30.2■■■□□ 2.43
CLN6-207ENST00000566347 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.19■■■□□ 2.42
CLN6-207ENST00000566347 ATF3P18847 181 aa30.17■■■□□ 2.42
CLN6-207ENST00000566347 VGFO15240 615 aaPredicted RBP30.16■■■□□ 2.42
CLN6-207ENST00000566347 RPGRIP1LQ68CZ1 1315 aa30.16■■■□□ 2.42
CLN6-207ENST00000566347 METP08581 1390 aa30.15■■■□□ 2.42
CLN6-207ENST00000566347 ACIN1Q9UKV3 1341 aaKnown RBP30.13■■■□□ 2.41
CLN6-207ENST00000566347 PHLPP1O60346 1717 aa30.13■■■□□ 2.41
CLN6-207ENST00000566347 DCCP43146 1447 aa30.12■■■□□ 2.41
CLN6-207ENST00000566347 FOXD1Q16676 465 aa30.09■■■□□ 2.41
CLN6-207ENST00000566347 MPHOSPH9Q99550 1183 aa30.09■■■□□ 2.41
CLN6-207ENST00000566347 CCDC144AA2RUR9 1427 aa30.07■■■□□ 2.4
CLN6-207ENST00000566347 PPLO60437 1756 aa30.07■■■□□ 2.4
CLN6-207ENST00000566347 JCADQ9P266 1359 aa30.04■■■□□ 2.4
CLN6-207ENST00000566347 SETD1AO15047 1707 aaKnown RBP30.04■■■□□ 2.4
CLN6-207ENST00000566347 COL16A1Q07092 1604 aaPredicted RBP30.04■■■□□ 2.4
CLN6-207ENST00000566347 SETD5Q9C0A6 1442 aa30.03■■■□□ 2.4
CLN6-207ENST00000566347 AHDC1Q5TGY3 1603 aaPredicted RBP30.03■■■□□ 2.4
CLN6-207ENST00000566347 ADGRL3Q9HAR2 1447 aa30.02■■■□□ 2.4
CLN6-207ENST00000566347 PTCH1Q13635 1447 aa30■■■□□ 2.39
CLN6-207ENST00000566347 BRINP3Q76B58 766 aa29.98■■■□□ 2.39
CLN6-207ENST00000566347 MST1RQ04912 1400 aa29.97■■■□□ 2.39
CLN6-207ENST00000566347 SPATA31E1Q6ZUB1 1445 aa29.97■■■□□ 2.39
CLN6-207ENST00000566347 PRAG1Q86YV5 1406 aa29.97■■■□□ 2.39
CLN6-207ENST00000566347 RGS17Q9UGC6 210 aaPredicted RBP29.97■■■□□ 2.39
CLN6-207ENST00000566347 NALCNQ8IZF0 1738 aa29.96■■■□□ 2.39
CLN6-207ENST00000566347 ANKRD30BQ9BXX2 1392 aa29.94■■■□□ 2.38
CLN6-207ENST00000566347 ASXL1Q8IXJ9 1541 aa29.94■■■□□ 2.38
CLN6-207ENST00000566347 RGL3Q3MIN7 710 aa29.93■■■□□ 2.38
CLN6-207ENST00000566347 SPATA31A6Q5VVP1 1343 aa29.92■■■□□ 2.38
CLN6-207ENST00000566347 ROBO2Q9HCK4 1378 aa29.91■■■□□ 2.38
CLN6-207ENST00000566347 IFT172Q9UG01 1749 aa29.91■■■□□ 2.38
CLN6-207ENST00000566347 ADGRF5Q8IZF2 1346 aa29.9■■■□□ 2.38
CLN6-207ENST00000566347 RAB3GAP2Q9H2M9 1393 aa29.9■■■□□ 2.38
CLN6-207ENST00000566347 SHPRHQ149N8 1683 aa29.89■■■□□ 2.38
CLN6-207ENST00000566347 NHSL1Q5SYE7 1610 aa29.87■■■□□ 2.37
CLN6-207ENST00000566347 C1orf167Q5SNV9 1468 aa29.83■■■□□ 2.37
CLN6-207ENST00000566347 PIK3C2GO75747 1445 aa29.81■■■□□ 2.36
CLN6-207ENST00000566347 POTEAQ6S8J7 498 aa29.81■■■□□ 2.36
CLN6-207ENST00000566347 LRP6O75581 1613 aa29.81■■■□□ 2.36
CLN6-207ENST00000566347 MEX3CQ5U5Q3 659 aaKnown RBP29.79■■■□□ 2.36
CLN6-207ENST00000566347 LRRC59Q96AG4 307 aaKnown RBP29.79■■■□□ 2.36
CLN6-207ENST00000566347 TECPR2O15040 1411 aa29.79■■■□□ 2.36
CLN6-207ENST00000566347 LRPPRCP42704 1394 aaKnown RBP29.78■■■□□ 2.36
CLN6-207ENST00000566347 CDC42BPGQ6DT37 1551 aa29.75■■■□□ 2.35
CLN6-207ENST00000566347 STK26Q9P289 416 aa29.75■■■□□ 2.35
CLN6-207ENST00000566347 ABCC11Q96J66 1382 aa29.75■■■□□ 2.35
CLN6-207ENST00000566347 KNDC1Q76NI1 1749 aa29.74■■■□□ 2.35
CLN6-207ENST00000566347 LAMC1P11047 1609 aa29.74■■■□□ 2.35
CLN6-207ENST00000566347 MYOM2P54296 1465 aa29.74■■■□□ 2.35
CLN6-207ENST00000566347 HRCP23327 699 aa29.73■■■□□ 2.35
CLN6-207ENST00000566347 NRXN1Q9ULB1 1477 aa29.73■■■□□ 2.35
CLN6-207ENST00000566347 DDX17Q92841 729 aaKnown RBP29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms