RNA–Protein interactions for RNA: ENST00000566327.5

SNAP23-213, Transcript of synaptosome associated protein 23, human

TSL 4

Gene SNAP23, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNAP23-213	ENST00000566327	RIMS2	Q9UQ26	1411 aa		29.39	■■■□□ 2.3
SNAP23-213	ENST00000566327	ZFYVE9	O95405	1425 aa		29.38	■■■□□ 2.29
SNAP23-213	ENST00000566327	SLC4A1AP	Q9BWU0	796 aa	Known RBP	29.38	■■■□□ 2.29
SNAP23-213	ENST00000566327	PLEKHG1	Q9ULL1	1385 aa		29.36	■■■□□ 2.29
SNAP23-213	ENST00000566327	BCAN	Q96GW7	911 aa		29.35	■■■□□ 2.29
SNAP23-213	ENST00000566327	STRCP1	A6NGW2	1772 aa		29.33	■■■□□ 2.29
SNAP23-213	ENST00000566327	SETD5	Q9C0A6	1442 aa		29.32	■■■□□ 2.28
SNAP23-213	ENST00000566327	DIP2A	Q14689	1571 aa		29.31	■■■□□ 2.28
SNAP23-213	ENST00000566327	CLTCL1	P53675	1640 aa		29.31	■■■□□ 2.28
SNAP23-213	ENST00000566327	UBAP1L	F5GYI3	381 aa		29.29	■■■□□ 2.28
SNAP23-213	ENST00000566327	TOM1	O60784	492 aa		29.29	■■■□□ 2.28
SNAP23-213	ENST00000566327	ZNF326	Q5BKZ1	582 aa	Known RBP	29.26	■■■□□ 2.27
SNAP23-213	ENST00000566327	LRRC7	Q96NW7	1537 aa		29.25	■■■□□ 2.27
SNAP23-213	ENST00000566327	NKTR	P30414	1462 aa	Known RBP	29.24	■■■□□ 2.27
SNAP23-213	ENST00000566327	KCNA6	P17658	529 aa		29.24	■■■□□ 2.27
SNAP23-213	ENST00000566327	NWD1	Q149M9	1564 aa		29.24	■■■□□ 2.27
SNAP23-213	ENST00000566327	CHD2	O14647	1828 aa	Known RBP	29.24	■■■□□ 2.27
SNAP23-213	ENST00000566327	SLC26A8	Q96RN1	970 aa		29.23	■■■□□ 2.27
SNAP23-213	ENST00000566327	TBX22	Q9Y458	520 aa		29.21	■■■□□ 2.27
SNAP23-213	ENST00000566327	PIK3R4	Q99570	1358 aa		29.21	■■■□□ 2.27
SNAP23-213	ENST00000566327	MPHOSPH9	Q99550	1183 aa		29.19	■■■□□ 2.26
SNAP23-213	ENST00000566327	CCDC144A	A2RUR9	1427 aa		29.18	■■■□□ 2.26
SNAP23-213	ENST00000566327	XIRP1	Q702N8	1843 aa	Known RBP	29.16	■■■□□ 2.26
SNAP23-213	ENST00000566327	SETBP1	Q9Y6X0	1596 aa		29.16	■■■□□ 2.26
SNAP23-213	ENST00000566327	RPGRIP1L	Q68CZ1	1315 aa		29.16	■■■□□ 2.26
SNAP23-213	ENST00000566327	RAB3GAP2	Q9H2M9	1393 aa		29.15	■■■□□ 2.26
SNAP23-213	ENST00000566327	NEXMIF	Q5QGS0	1516 aa		29.15	■■■□□ 2.26
SNAP23-213	ENST00000566327	HRC	P23327	699 aa		29.13	■■■□□ 2.25
SNAP23-213	ENST00000566327	VGF	O15240	615 aa	Predicted RBP	29.12	■■■□□ 2.25
SNAP23-213	ENST00000566327	ADAMTS13	Q76LX8	1427 aa		29.11	■■■□□ 2.25
SNAP23-213	ENST00000566327	PROSER2	Q86WR7	435 aa	Predicted RBP	29.11	■■■□□ 2.25
SNAP23-213	ENST00000566327	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.1	■■■□□ 2.25
SNAP23-213	ENST00000566327	SCAF1	Q9H7N4	1312 aa	Known RBP	29.1	■■■□□ 2.25
SNAP23-213	ENST00000566327	PPL	O60437	1756 aa		29.1	■■■□□ 2.25
SNAP23-213	ENST00000566327	NCOA3	Q9Y6Q9	1424 aa		29.08	■■■□□ 2.25
SNAP23-213	ENST00000566327	TMEM94	Q12767	1356 aa		29.07	■■■□□ 2.24
SNAP23-213	ENST00000566327	NRXN3	Q9Y4C0	1643 aa		29.06	■■■□□ 2.24
SNAP23-213	ENST00000566327	MSH6	P52701	1360 aa		29.04	■■■□□ 2.24
SNAP23-213	ENST00000566327	PIP4K2B	P78356	416 aa		29.04	■■■□□ 2.24
SNAP23-213	ENST00000566327	FOXD1	Q16676	465 aa		29.03	■■■□□ 2.24
SNAP23-213	ENST00000566327	SENP3	Q9H4L4	574 aa	Predicted RBP	29.02	■■■□□ 2.24
SNAP23-213	ENST00000566327	ANKRD30B	Q9BXX2	1392 aa		29	■■■□□ 2.23
SNAP23-213	ENST00000566327	IFT172	Q9UG01	1749 aa		28.98	■■■□□ 2.23
SNAP23-213	ENST00000566327	ALK	Q9UM73	1620 aa		28.98	■■■□□ 2.23
SNAP23-213	ENST00000566327	XRN1	Q8IZH2	1706 aa	Known RBP	28.97	■■■□□ 2.23
SNAP23-213	ENST00000566327	AMOTL2	Q9Y2J4	779 aa		28.96	■■■□□ 2.23
SNAP23-213	ENST00000566327	SPATA31E1	Q6ZUB1	1445 aa		28.95	■■■□□ 2.23
SNAP23-213	ENST00000566327	C14orf37	Q86TY3	774 aa		28.94	■■■□□ 2.22
SNAP23-213	ENST00000566327	SETD1A	O15047	1707 aa	Known RBP	28.91	■■■□□ 2.22
SNAP23-213	ENST00000566327	FAM135B	Q49AJ0	1406 aa		28.9	■■■□□ 2.22
SNAP23-213	ENST00000566327	RGL3	Q3MIN7	710 aa		28.89	■■■□□ 2.22
SNAP23-213	ENST00000566327	PTPRU	Q92729	1446 aa		28.88	■■■□□ 2.21
SNAP23-213	ENST00000566327	C19orf44	Q9H6X5	657 aa		28.88	■■■□□ 2.21
SNAP23-213	ENST00000566327	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.87	■■■□□ 2.21
SNAP23-213	ENST00000566327	CADPS2	Q86UW7	1296 aa		28.87	■■■□□ 2.21
SNAP23-213	ENST00000566327	MET	P08581	1390 aa		28.87	■■■□□ 2.21
SNAP23-213	ENST00000566327	DCC	P43146	1447 aa		28.86	■■■□□ 2.21
SNAP23-213	ENST00000566327	HSPA1L	P34931	641 aa		28.86	■■■□□ 2.21
SNAP23-213	ENST00000566327	LAMC1	P11047	1609 aa		28.85	■■■□□ 2.21
SNAP23-213	ENST00000566327	ATF3	P18847	181 aa		28.85	■■■□□ 2.21
SNAP23-213	ENST00000566327	ROBO1	Q9Y6N7	1651 aa		28.85	■■■□□ 2.21
SNAP23-213	ENST00000566327	PTCH1	Q13635	1447 aa		28.84	■■■□□ 2.21
SNAP23-213	ENST00000566327	RBM33	Q96EV2	1170 aa	Known RBP	28.83	■■■□□ 2.21
SNAP23-213	ENST00000566327	PRAG1	Q86YV5	1406 aa		28.83	■■■□□ 2.21
SNAP23-213	ENST00000566327	MYOM2	P54296	1465 aa		28.82	■■■□□ 2.2
SNAP23-213	ENST00000566327	STAC3	Q96MF2	364 aa		28.81	■■■□□ 2.2
SNAP23-213	ENST00000566327	SLAIN2	Q9P270	581 aa		28.81	■■■□□ 2.2
SNAP23-213	ENST00000566327	PIK3C2G	O75747	1445 aa		28.78	■■■□□ 2.2
SNAP23-213	ENST00000566327	ADGRF5	Q8IZF2	1346 aa		28.77	■■■□□ 2.2
SNAP23-213	ENST00000566327	ADGRL3	Q9HAR2	1447 aa		28.76	■■■□□ 2.19
SNAP23-213	ENST00000566327	KNDC1	Q76NI1	1749 aa		28.75	■■■□□ 2.19
SNAP23-213	ENST00000566327	NALCN	Q8IZF0	1738 aa		28.74	■■■□□ 2.19
SNAP23-213	ENST00000566327	DISP3	Q9P2K9	1392 aa		28.73	■■■□□ 2.19
SNAP23-213	ENST00000566327	NRXN1	Q9ULB1	1477 aa		28.72	■■■□□ 2.19
SNAP23-213	ENST00000566327	PHLPP1	O60346	1717 aa		28.72	■■■□□ 2.19
SNAP23-213	ENST00000566327	TECPR2	O15040	1411 aa		28.68	■■■□□ 2.18
SNAP23-213	ENST00000566327	LRPPRC	P42704	1394 aa	Known RBP	28.67	■■■□□ 2.18
SNAP23-213	ENST00000566327	DHX57	Q6P158	1386 aa	Known RBP	28.65	■■■□□ 2.18
SNAP23-213	ENST00000566327	ABCC11	Q96J66	1382 aa		28.65	■■■□□ 2.18
SNAP23-213	ENST00000566327	ROBO2	Q9HCK4	1378 aa		28.65	■■■□□ 2.18
SNAP23-213	ENST00000566327	C14orf93	Q9H972	538 aa	Known RBP	28.65	■■■□□ 2.18
SNAP23-213	ENST00000566327	MED1	Q15648	1581 aa	Predicted RBP	28.65	■■■□□ 2.18
SNAP23-213	ENST00000566327	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.64	■■■□□ 2.18
SNAP23-213	ENST00000566327	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.62	■■■□□ 2.17
SNAP23-213	ENST00000566327	MST1R	Q04912	1400 aa		28.61	■■■□□ 2.17
SNAP23-213	ENST00000566327	DCAF11	Q8TEB1	546 aa		28.61	■■■□□ 2.17
SNAP23-213	ENST00000566327	ASXL1	Q8IXJ9	1541 aa		28.6	■■■□□ 2.17
SNAP23-213	ENST00000566327	CDC42BPG	Q6DT37	1551 aa		28.6	■■■□□ 2.17
SNAP23-213	ENST00000566327	TRIM26	Q12899	539 aa	Predicted RBP	28.6	■■■□□ 2.17
SNAP23-213	ENST00000566327	SIRT1	Q96EB6	747 aa		28.6	■■■□□ 2.17
SNAP23-213	ENST00000566327	STK26	Q9P289	416 aa		28.57	■■■□□ 2.16
SNAP23-213	ENST00000566327	COL16A1	Q07092	1604 aa	Predicted RBP	28.57	■■■□□ 2.16
SNAP23-213	ENST00000566327	NHSL1	Q5SYE7	1610 aa		28.56	■■■□□ 2.16
SNAP23-213	ENST00000566327	JCAD	Q9P266	1359 aa		28.56	■■■□□ 2.16
SNAP23-213	ENST00000566327	TMEM132E	Q6IEE7	984 aa		28.55	■■■□□ 2.16
SNAP23-213	ENST00000566327	BRINP3	Q76B58	766 aa		28.55	■■■□□ 2.16
SNAP23-213	ENST00000566327	CFAP70	Q5T0N1	1121 aa		28.54	■■■□□ 2.16
SNAP23-213	ENST00000566327	KDM2A	Q9Y2K7	1162 aa		28.54	■■■□□ 2.16
SNAP23-213	ENST00000566327	DLC1	Q96QB1	1528 aa		28.53	■■■□□ 2.16
SNAP23-213	ENST00000566327	KIAA1210	Q9ULL0	1709 aa		28.53	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms