RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 SLC26A8Q96RN1 970 aa25.47■■□□□ 1.67
TSR3-202ENST00000566296 MYO5BQ9ULV0 1848 aa25.47■■□□□ 1.67
TSR3-202ENST00000566296 PROSER2Q86WR7 435 aaPredicted RBP25.43■■□□□ 1.66
TSR3-202ENST00000566296 PPP1R15AO75807 674 aaPredicted RBP25.42■■□□□ 1.66
TSR3-202ENST00000566296 ZFYVE9O95405 1425 aa25.42■■□□□ 1.66
TSR3-202ENST00000566296 FAM135BQ49AJ0 1406 aa25.42■■□□□ 1.66
TSR3-202ENST00000566296 ROCK1Q13464 1354 aa25.42■■□□□ 1.66
TSR3-202ENST00000566296 TMEM131LA2VDJ0 1609 aa25.41■■□□□ 1.66
TSR3-202ENST00000566296 RIMS2Q9UQ26 1411 aa25.41■■□□□ 1.66
TSR3-202ENST00000566296 PLEKHG1Q9ULL1 1385 aa25.41■■□□□ 1.66
TSR3-202ENST00000566296 HDGFP51858 240 aaKnown RBP25.4■■□□□ 1.66
TSR3-202ENST00000566296 E9PCH4 1651 aa25.39■■□□□ 1.66
TSR3-202ENST00000566296 IQGAP3Q86VI3 1631 aa25.39■■□□□ 1.66
TSR3-202ENST00000566296 ROBO1Q9Y6N7 1651 aa25.39■■□□□ 1.65
TSR3-202ENST00000566296 MSH6P52701 1360 aa25.38■■□□□ 1.65
TSR3-202ENST00000566296 CHGAP10645 457 aaKnown RBP25.36■■□□□ 1.65
TSR3-202ENST00000566296 CHD2O14647 1828 aaKnown RBP25.35■■□□□ 1.65
TSR3-202ENST00000566296 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.34■■□□□ 1.65
TSR3-202ENST00000566296 RBM33Q96EV2 1170 aaKnown RBP25.34■■□□□ 1.65
TSR3-202ENST00000566296 DIP2AQ14689 1571 aa25.31■■□□□ 1.64
TSR3-202ENST00000566296 NUP155O75694 1391 aa25.3■■□□□ 1.64
TSR3-202ENST00000566296 ITGAEP38570 1179 aa25.29■■□□□ 1.64
TSR3-202ENST00000566296 TBX22Q9Y458 520 aa25.27■■□□□ 1.64
TSR3-202ENST00000566296 ADAMTS13Q76LX8 1427 aa25.25■■□□□ 1.63
TSR3-202ENST00000566296 PHLPP1O60346 1717 aa25.25■■□□□ 1.63
TSR3-202ENST00000566296 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
TSR3-202ENST00000566296 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
TSR3-202ENST00000566296 NUTM2DQ5VT03 806 aaPredicted RBP25.23■■□□□ 1.63
TSR3-202ENST00000566296 C14orf37Q86TY3 774 aa25.23■■□□□ 1.63
TSR3-202ENST00000566296 TRPM2O94759 1503 aa25.22■■□□□ 1.63
TSR3-202ENST00000566296 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
TSR3-202ENST00000566296 SPHKAPQ2M3C7 1700 aa25.22■■□□□ 1.63
TSR3-202ENST00000566296 RGS17Q9UGC6 210 aaPredicted RBP25.2■■□□□ 1.62
TSR3-202ENST00000566296 PPARGC1BQ86YN6 1023 aaKnown RBP25.18■■□□□ 1.62
TSR3-202ENST00000566296 JCADQ9P266 1359 aa25.18■■□□□ 1.62
TSR3-202ENST00000566296 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.16■■□□□ 1.62
TSR3-202ENST00000566296 COL16A1Q07092 1604 aaPredicted RBP25.15■■□□□ 1.62
TSR3-202ENST00000566296 CADPS2Q86UW7 1296 aa25.14■■□□□ 1.62
TSR3-202ENST00000566296 ATF3P18847 181 aa25.13■■□□□ 1.61
TSR3-202ENST00000566296 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
TSR3-202ENST00000566296 C19orf44Q9H6X5 657 aa25.12■■□□□ 1.61
TSR3-202ENST00000566296 NRXN3Q9Y4C0 1643 aa25.11■■□□□ 1.61
TSR3-202ENST00000566296 ZNF326Q5BKZ1 582 aaKnown RBP25.1■■□□□ 1.61
TSR3-202ENST00000566296 AMOTL2Q9Y2J4 779 aa25.1■■□□□ 1.61
TSR3-202ENST00000566296 AHDC1Q5TGY3 1603 aaPredicted RBP25.1■■□□□ 1.61
TSR3-202ENST00000566296 PTPRUQ92729 1446 aa25.1■■□□□ 1.61
TSR3-202ENST00000566296 XRN1Q8IZH2 1706 aaKnown RBP25.09■■□□□ 1.61
TSR3-202ENST00000566296 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
TSR3-202ENST00000566296 POTEAQ6S8J7 498 aa25.08■■□□□ 1.61
TSR3-202ENST00000566296 DCCP43146 1447 aa25.07■■□□□ 1.6
TSR3-202ENST00000566296 CLTCL1P53675 1640 aa25.07■■□□□ 1.6
TSR3-202ENST00000566296 KIF1BO60333 1816 aa25.04■■□□□ 1.6
TSR3-202ENST00000566296 SPATA31A6Q5VVP1 1343 aa25.04■■□□□ 1.6
TSR3-202ENST00000566296 SHPRHQ149N8 1683 aa25.04■■□□□ 1.6
TSR3-202ENST00000566296 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
TSR3-202ENST00000566296 NAIPQ13075 1403 aa25.03■■□□□ 1.6
TSR3-202ENST00000566296 MEX3CQ5U5Q3 659 aaKnown RBP25■■□□□ 1.59
TSR3-202ENST00000566296 LRP6O75581 1613 aa25■■□□□ 1.59
TSR3-202ENST00000566296 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
TSR3-202ENST00000566296 METP08581 1390 aa24.98■■□□□ 1.59
TSR3-202ENST00000566296 BRINP3Q76B58 766 aa24.98■■□□□ 1.59
TSR3-202ENST00000566296 SETD1AO15047 1707 aaKnown RBP24.97■■□□□ 1.59
TSR3-202ENST00000566296 MST1RQ04912 1400 aa24.95■■□□□ 1.59
TSR3-202ENST00000566296 ADGRL3Q9HAR2 1447 aa24.95■■□□□ 1.59
TSR3-202ENST00000566296 HFM1A2PYH4 1435 aa24.94■■□□□ 1.58
TSR3-202ENST00000566296 NHSL1Q5SYE7 1610 aa24.94■■□□□ 1.58
TSR3-202ENST00000566296 NALCNQ8IZF0 1738 aa24.93■■□□□ 1.58
TSR3-202ENST00000566296 TRIM52Q96A61 297 aa24.93■■□□□ 1.58
TSR3-202ENST00000566296 ZNF772Q68DY9 489 aaPredicted RBP24.92■■□□□ 1.58
TSR3-202ENST00000566296 SETD5Q9C0A6 1442 aa24.89■■□□□ 1.58
TSR3-202ENST00000566296 PTCH1Q13635 1447 aa24.88■■□□□ 1.57
TSR3-202ENST00000566296 VGFO15240 615 aaPredicted RBP24.87■■□□□ 1.57
TSR3-202ENST00000566296 SLC4A1APQ9BWU0 796 aaKnown RBP24.87■■□□□ 1.57
TSR3-202ENST00000566296 NUTM2BA6NNL0 878 aaPredicted RBP24.86■■□□□ 1.57
TSR3-202ENST00000566296 NUTM2EB1AL46 878 aaPredicted RBP24.86■■□□□ 1.57
TSR3-202ENST00000566296 NUTM2AQ8IVF1 878 aaPredicted RBP24.86■■□□□ 1.57
TSR3-202ENST00000566296 RPGRIP1LQ68CZ1 1315 aa24.85■■□□□ 1.57
TSR3-202ENST00000566296 PPLO60437 1756 aa24.84■■□□□ 1.57
TSR3-202ENST00000566296 LRRC59Q96AG4 307 aaKnown RBP24.83■■□□□ 1.57
TSR3-202ENST00000566296 PRAG1Q86YV5 1406 aa24.81■■□□□ 1.56
TSR3-202ENST00000566296 C1orf167Q5SNV9 1468 aa24.8■■□□□ 1.56
TSR3-202ENST00000566296 ROBO2Q9HCK4 1378 aa24.8■■□□□ 1.56
TSR3-202ENST00000566296 PNPLA6Q8IY17 1366 aa24.78■■□□□ 1.56
TSR3-202ENST00000566296 DDX17Q92841 729 aaKnown RBP24.77■■□□□ 1.56
TSR3-202ENST00000566296 AFF2P51816 1311 aa24.77■■□□□ 1.56
TSR3-202ENST00000566296 RXRBP28702 533 aa24.76■■□□□ 1.55
TSR3-202ENST00000566296 LAMC1P11047 1609 aa24.75■■□□□ 1.55
TSR3-202ENST00000566296 CCDC144AA2RUR9 1427 aa24.75■■□□□ 1.55
TSR3-202ENST00000566296 CDK12Q9NYV4 1490 aaPredicted RBP24.75■■□□□ 1.55
TSR3-202ENST00000566296 C8orf37Q96NL8 207 aa24.71■■□□□ 1.55
TSR3-202ENST00000566296 FOXD1Q16676 465 aa24.7■■□□□ 1.54
TSR3-202ENST00000566296 CDC42BPGQ6DT37 1551 aa24.7■■□□□ 1.54
TSR3-202ENST00000566296 ORAI2Q96SN7 254 aa24.68■■□□□ 1.54
TSR3-202ENST00000566296 SOS2Q07890 1332 aaPredicted RBP24.67■■□□□ 1.54
TSR3-202ENST00000566296 IFT172Q9UG01 1749 aa24.67■■□□□ 1.54
TSR3-202ENST00000566296 UPF1Q92900 1129 aaKnown RBP eCLIP24.67■■□□□ 1.54
TSR3-202ENST00000566296 ANKRD30BQ9BXX2 1392 aa24.66■■□□□ 1.54
TSR3-202ENST00000566296 SPATA31E1Q6ZUB1 1445 aa24.65■■□□□ 1.54
TSR3-202ENST00000566296 ADGRF5Q8IZF2 1346 aa24.64■■□□□ 1.54
TSR3-202ENST00000566296 ADAMTS2O95450 1211 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms