RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 CHGAP10645 457 aaKnown RBP31.08■■■□□ 2.57
SHCBP1-205ENST00000566016 HDGFP51858 240 aaKnown RBP31.05■■■□□ 2.56
SHCBP1-205ENST00000566016 NEXMIFQ5QGS0 1516 aa31.03■■■□□ 2.56
SHCBP1-205ENST00000566016 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.03■■■□□ 2.56
SHCBP1-205ENST00000566016 ANKRD30BQ9BXX2 1392 aa31.03■■■□□ 2.56
SHCBP1-205ENST00000566016 PLEKHG1Q9ULL1 1385 aa31■■■□□ 2.55
SHCBP1-205ENST00000566016 SPATA31E1Q6ZUB1 1445 aa31■■■□□ 2.55
SHCBP1-205ENST00000566016 PPLO60437 1756 aa30.98■■■□□ 2.55
SHCBP1-205ENST00000566016 LTBP4Q8N2S1 1624 aa30.97■■■□□ 2.55
SHCBP1-205ENST00000566016 IFT172Q9UG01 1749 aa30.96■■■□□ 2.55
SHCBP1-205ENST00000566016 ZNF326Q5BKZ1 582 aaKnown RBP30.95■■■□□ 2.55
SHCBP1-205ENST00000566016 PPP1R15AO75807 674 aaPredicted RBP30.95■■■□□ 2.54
SHCBP1-205ENST00000566016 RPGRIP1LQ68CZ1 1315 aa30.94■■■□□ 2.54
SHCBP1-205ENST00000566016 DIP2AQ14689 1571 aa30.94■■■□□ 2.54
SHCBP1-205ENST00000566016 SETBP1Q9Y6X0 1596 aa30.92■■■□□ 2.54
SHCBP1-205ENST00000566016 ZNF335Q9H4Z2 1342 aaPredicted RBP30.9■■■□□ 2.54
SHCBP1-205ENST00000566016 NRXN3Q9Y4C0 1643 aa30.89■■■□□ 2.54
SHCBP1-205ENST00000566016 CPS1P31327 1500 aa30.88■■■□□ 2.53
SHCBP1-205ENST00000566016 STRCP1A6NGW2 1772 aa30.87■■■□□ 2.53
SHCBP1-205ENST00000566016 ADAMTS13Q76LX8 1427 aa30.86■■■□□ 2.53
SHCBP1-205ENST00000566016 DHX57Q6P158 1386 aaKnown RBP30.84■■■□□ 2.53
SHCBP1-205ENST00000566016 NUTM2DQ5VT03 806 aaPredicted RBP30.84■■■□□ 2.53
SHCBP1-205ENST00000566016 VGFO15240 615 aaPredicted RBP30.83■■■□□ 2.53
SHCBP1-205ENST00000566016 NWD1Q149M9 1564 aa30.82■■■□□ 2.53
SHCBP1-205ENST00000566016 IQSEC2Q5JU85 1478 aa30.82■■■□□ 2.52
SHCBP1-205ENST00000566016 CHD2O14647 1828 aaKnown RBP30.82■■■□□ 2.52
SHCBP1-205ENST00000566016 SLC26A8Q96RN1 970 aa30.81■■■□□ 2.52
SHCBP1-205ENST00000566016 TBX22Q9Y458 520 aa30.81■■■□□ 2.52
SHCBP1-205ENST00000566016 BCANQ96GW7 911 aa30.8■■■□□ 2.52
SHCBP1-205ENST00000566016 PIK3R4Q99570 1358 aa30.79■■■□□ 2.52
SHCBP1-205ENST00000566016 RGL3Q3MIN7 710 aa30.78■■■□□ 2.52
SHCBP1-205ENST00000566016 MYOM2P54296 1465 aa30.78■■■□□ 2.52
SHCBP1-205ENST00000566016 SETD1AO15047 1707 aaKnown RBP30.78■■■□□ 2.52
SHCBP1-205ENST00000566016 CERKQ8TCT0 537 aa30.77■■■□□ 2.52
SHCBP1-205ENST00000566016 PCGF6Q9BYE7 350 aa30.76■■■□□ 2.52
SHCBP1-205ENST00000566016 NKTRP30414 1462 aaKnown RBP30.75■■■□□ 2.51
SHCBP1-205ENST00000566016 NRXN1Q9ULB1 1477 aa30.73■■■□□ 2.51
SHCBP1-205ENST00000566016 KCNA6P17658 529 aa30.72■■■□□ 2.51
SHCBP1-205ENST00000566016 ALKQ9UM73 1620 aa30.72■■■□□ 2.51
SHCBP1-205ENST00000566016 PIK3C2GO75747 1445 aa30.7■■■□□ 2.51
SHCBP1-205ENST00000566016 LRRC7Q96NW7 1537 aa30.69■■■□□ 2.5
SHCBP1-205ENST00000566016 XRN1Q8IZH2 1706 aaKnown RBP30.69■■■□□ 2.5
SHCBP1-205ENST00000566016 SENP3Q9H4L4 574 aaPredicted RBP30.69■■■□□ 2.5
SHCBP1-205ENST00000566016 STAC3Q96MF2 364 aa30.68■■■□□ 2.5
SHCBP1-205ENST00000566016 ADGRF5Q8IZF2 1346 aa30.68■■■□□ 2.5
SHCBP1-205ENST00000566016 LAMC1P11047 1609 aa30.68■■■□□ 2.5
SHCBP1-205ENST00000566016 XIRP1Q702N8 1843 aaKnown RBP30.67■■■□□ 2.5
SHCBP1-205ENST00000566016 METP08581 1390 aa30.63■■■□□ 2.49
SHCBP1-205ENST00000566016 PTPRUQ92729 1446 aa30.62■■■□□ 2.49
SHCBP1-205ENST00000566016 PRAG1Q86YV5 1406 aa30.61■■■□□ 2.49
SHCBP1-205ENST00000566016 DCAF11Q8TEB1 546 aa30.57■■■□□ 2.48
SHCBP1-205ENST00000566016 NCOA3Q9Y6Q9 1424 aa30.55■■■□□ 2.48
SHCBP1-205ENST00000566016 ASXL1Q8IXJ9 1541 aa30.55■■■□□ 2.48
SHCBP1-205ENST00000566016 SIN3AQ96ST3 1273 aa30.54■■■□□ 2.48
SHCBP1-205ENST00000566016 AMOTL2Q9Y2J4 779 aa30.54■■■□□ 2.48
SHCBP1-205ENST00000566016 TMEM94Q12767 1356 aa30.54■■■□□ 2.48
SHCBP1-205ENST00000566016 FBXO41Q8TF61 875 aa30.53■■■□□ 2.48
SHCBP1-205ENST00000566016 KNDC1Q76NI1 1749 aa30.53■■■□□ 2.48
SHCBP1-205ENST00000566016 PTCH1Q13635 1447 aa30.53■■■□□ 2.48
SHCBP1-205ENST00000566016 PROSER2Q86WR7 435 aaPredicted RBP30.51■■■□□ 2.48
SHCBP1-205ENST00000566016 C14orf93Q9H972 538 aaKnown RBP30.51■■■□□ 2.48
SHCBP1-205ENST00000566016 KIAA1210Q9ULL0 1709 aa30.5■■■□□ 2.47
SHCBP1-205ENST00000566016 TECPR2O15040 1411 aa30.49■■■□□ 2.47
SHCBP1-205ENST00000566016 CLSPNQ9HAW4 1339 aa30.49■■■□□ 2.47
SHCBP1-205ENST00000566016 KDM2AQ9Y2K7 1162 aa30.48■■■□□ 2.47
SHCBP1-205ENST00000566016 ADGRB1O14514 1584 aa30.46■■■□□ 2.47
SHCBP1-205ENST00000566016 NEUROD1Q13562 356 aa30.45■■■□□ 2.47
SHCBP1-205ENST00000566016 LRPPRCP42704 1394 aaKnown RBP30.45■■■□□ 2.47
SHCBP1-205ENST00000566016 L3MBTL2Q969R5 705 aa30.44■■■□□ 2.46
SHCBP1-205ENST00000566016 CFAP70Q5T0N1 1121 aa30.44■■■□□ 2.46
SHCBP1-205ENST00000566016 ABCC11Q96J66 1382 aa30.43■■■□□ 2.46
SHCBP1-205ENST00000566016 YTHDC2Q9H6S0 1430 aaKnown RBP30.43■■■□□ 2.46
SHCBP1-205ENST00000566016 MSH6P52701 1360 aa30.41■■■□□ 2.46
SHCBP1-205ENST00000566016 ROBO2Q9HCK4 1378 aa30.4■■■□□ 2.46
SHCBP1-205ENST00000566016 NALCNQ8IZF0 1738 aa30.39■■■□□ 2.46
SHCBP1-205ENST00000566016 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.39■■■□□ 2.46
SHCBP1-205ENST00000566016 UBAP1LF5GYI3 381 aa30.39■■■□□ 2.46
SHCBP1-205ENST00000566016 TOM1O60784 492 aa30.39■■■□□ 2.46
SHCBP1-205ENST00000566016 DCCP43146 1447 aa30.38■■■□□ 2.45
SHCBP1-205ENST00000566016 TMEM132EQ6IEE7 984 aa30.38■■■□□ 2.45
SHCBP1-205ENST00000566016 RBM33Q96EV2 1170 aaKnown RBP30.38■■■□□ 2.45
SHCBP1-205ENST00000566016 ADGRL3Q9HAR2 1447 aa30.36■■■□□ 2.45
SHCBP1-205ENST00000566016 TONSLQ96HA7 1378 aa30.36■■■□□ 2.45
SHCBP1-205ENST00000566016 DLC1Q96QB1 1528 aa30.36■■■□□ 2.45
SHCBP1-205ENST00000566016 FAM135BQ49AJ0 1406 aa30.35■■■□□ 2.45
SHCBP1-205ENST00000566016 TRPM1Q7Z4N2 1603 aa30.34■■■□□ 2.45
SHCBP1-205ENST00000566016 C19orf44Q9H6X5 657 aa30.33■■■□□ 2.45
SHCBP1-205ENST00000566016 ILDR1Q86SU0 546 aaPredicted RBP30.32■■■□□ 2.44
SHCBP1-205ENST00000566016 SIRT1Q96EB6 747 aa30.32■■■□□ 2.44
SHCBP1-205ENST00000566016 C14orf37Q86TY3 774 aa30.31■■■□□ 2.44
SHCBP1-205ENST00000566016 STK26Q9P289 416 aa30.3■■■□□ 2.44
SHCBP1-205ENST00000566016 ARHGEF28Q8N1W1 1705 aaKnown RBP30.28■■■□□ 2.44
SHCBP1-205ENST00000566016 CADPS2Q86UW7 1296 aa30.27■■■□□ 2.44
SHCBP1-205ENST00000566016 CDC42BPGQ6DT37 1551 aa30.26■■■□□ 2.44
SHCBP1-205ENST00000566016 CCER1Q8TC90 406 aaPredicted RBP30.25■■■□□ 2.43
SHCBP1-205ENST00000566016 ATF3P18847 181 aa30.23■■■□□ 2.43
SHCBP1-205ENST00000566016 TIMELESSQ9UNS1 1208 aa30.23■■■□□ 2.43
SHCBP1-205ENST00000566016 PLEKHH1Q9ULM0 1364 aa30.21■■■□□ 2.43
SHCBP1-205ENST00000566016 ROBO1Q9Y6N7 1651 aa30.21■■■□□ 2.43
SHCBP1-205ENST00000566016 WAPLQ7Z5K2 1190 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms