RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 CPS1P31327 1500 aa22.2■■□□□ 1.14
KNOP1-203ENST00000565844 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
KNOP1-203ENST00000565844 LTKP29376 864 aa22.18■■□□□ 1.14
KNOP1-203ENST00000565844 NEUROD1Q13562 356 aa22.18■■□□□ 1.14
KNOP1-203ENST00000565844 IDI1Q13907 227 aa22.18■■□□□ 1.14
KNOP1-203ENST00000565844 STAG3Q9UJ98 1225 aa22.18■■□□□ 1.14
KNOP1-203ENST00000565844 ADGRB3O60242 1522 aa22.18■■□□□ 1.14
KNOP1-203ENST00000565844 TMEM131LA2VDJ0 1609 aa22.18■■□□□ 1.14
KNOP1-203ENST00000565844 KDM5AP29375 1690 aaKnown RBP22.17■■□□□ 1.14
KNOP1-203ENST00000565844 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
KNOP1-203ENST00000565844 SLIT1O75093 1534 aa22.16■■□□□ 1.14
KNOP1-203ENST00000565844 ARHGAP23Q9P227 1491 aa22.15■■□□□ 1.14
KNOP1-203ENST00000565844 TXNDC2Q86VQ3 553 aa22.15■■□□□ 1.14
KNOP1-203ENST00000565844 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
KNOP1-203ENST00000565844 PIP4K2BP78356 416 aa22.13■■□□□ 1.13
KNOP1-203ENST00000565844 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
KNOP1-203ENST00000565844 SPATA31E1Q6ZUB1 1445 aa22.13■■□□□ 1.13
KNOP1-203ENST00000565844 DISP3Q9P2K9 1392 aa22.11■■□□□ 1.13
KNOP1-203ENST00000565844 TMEM2Q9UHN6 1383 aa22.1■■□□□ 1.13
KNOP1-203ENST00000565844 EID1Q9Y6B2 187 aa22.1■■□□□ 1.13
KNOP1-203ENST00000565844 XIRP1Q702N8 1843 aaKnown RBP22.09■■□□□ 1.13
KNOP1-203ENST00000565844 IFT172Q9UG01 1749 aa22.08■■□□□ 1.13
KNOP1-203ENST00000565844 LRRC7Q96NW7 1537 aa22.08■■□□□ 1.13
KNOP1-203ENST00000565844 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
KNOP1-203ENST00000565844 RGL3Q3MIN7 710 aa22.07■■□□□ 1.12
KNOP1-203ENST00000565844 PPLO60437 1756 aa22.07■■□□□ 1.12
KNOP1-203ENST00000565844 ALKQ9UM73 1620 aa22.07■■□□□ 1.12
KNOP1-203ENST00000565844 ZNF326Q5BKZ1 582 aaKnown RBP22.05■■□□□ 1.12
KNOP1-203ENST00000565844 TOM1O60784 492 aa22.04■■□□□ 1.12
KNOP1-203ENST00000565844 NEXMIFQ5QGS0 1516 aa22.03■■□□□ 1.12
KNOP1-203ENST00000565844 SLC26A8Q96RN1 970 aa22.01■■□□□ 1.11
KNOP1-203ENST00000565844 HSPA1LP34931 641 aa22■■□□□ 1.11
KNOP1-203ENST00000565844 L3MBTL2Q969R5 705 aa22■■□□□ 1.11
KNOP1-203ENST00000565844 BCANQ96GW7 911 aa21.99■■□□□ 1.11
KNOP1-203ENST00000565844 RIMS2Q9UQ26 1411 aa21.99■■□□□ 1.11
KNOP1-203ENST00000565844 RPGRIP1LQ68CZ1 1315 aa21.99■■□□□ 1.11
KNOP1-203ENST00000565844 ZFYVE9O95405 1425 aa21.98■■□□□ 1.11
KNOP1-203ENST00000565844 ILDR2Q71H61 639 aa21.98■■□□□ 1.11
KNOP1-203ENST00000565844 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
KNOP1-203ENST00000565844 TIMELESSQ9UNS1 1208 aa21.98■■□□□ 1.11
KNOP1-203ENST00000565844 NUTM2DQ5VT03 806 aaPredicted RBP21.97■■□□□ 1.11
KNOP1-203ENST00000565844 RBM33Q96EV2 1170 aaKnown RBP21.97■■□□□ 1.11
KNOP1-203ENST00000565844 MYOM2P54296 1465 aa21.96■■□□□ 1.11
KNOP1-203ENST00000565844 KDM2AQ9Y2K7 1162 aa21.95■■□□□ 1.1
KNOP1-203ENST00000565844 PPP1R15AO75807 674 aaPredicted RBP21.93■■□□□ 1.1
KNOP1-203ENST00000565844 HDGFP51858 240 aaKnown RBP21.91■■□□□ 1.1
KNOP1-203ENST00000565844 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.91■■□□□ 1.1
KNOP1-203ENST00000565844 CHD2O14647 1828 aaKnown RBP21.91■■□□□ 1.1
KNOP1-203ENST00000565844 VGFO15240 615 aaPredicted RBP21.9■■□□□ 1.1
KNOP1-203ENST00000565844 STAC3Q96MF2 364 aa21.89■■□□□ 1.1
KNOP1-203ENST00000565844 TMEM94Q12767 1356 aa21.89■■□□□ 1.1
KNOP1-203ENST00000565844 NRXN1Q9ULB1 1477 aa21.89■■□□□ 1.09
KNOP1-203ENST00000565844 NWD1Q149M9 1564 aa21.89■■□□□ 1.09
KNOP1-203ENST00000565844 ZEB1P37275 1124 aaPredicted RBP21.88■■□□□ 1.09
KNOP1-203ENST00000565844 ADGRF5Q8IZF2 1346 aa21.88■■□□□ 1.09
KNOP1-203ENST00000565844 PRAG1Q86YV5 1406 aa21.88■■□□□ 1.09
KNOP1-203ENST00000565844 KCNA6P17658 529 aa21.87■■□□□ 1.09
KNOP1-203ENST00000565844 PROSER2Q86WR7 435 aaPredicted RBP21.87■■□□□ 1.09
KNOP1-203ENST00000565844 PLEKHG1Q9ULL1 1385 aa21.87■■□□□ 1.09
KNOP1-203ENST00000565844 MED1Q15648 1581 aaPredicted RBP21.87■■□□□ 1.09
KNOP1-203ENST00000565844 PIK3C2GO75747 1445 aa21.86■■□□□ 1.09
KNOP1-203ENST00000565844 LAMC1P11047 1609 aa21.86■■□□□ 1.09
KNOP1-203ENST00000565844 NRXN3Q9Y4C0 1643 aa21.86■■□□□ 1.09
KNOP1-203ENST00000565844 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
KNOP1-203ENST00000565844 TRPM1Q7Z4N2 1603 aa21.85■■□□□ 1.09
KNOP1-203ENST00000565844 KIAA1210Q9ULL0 1709 aa21.84■■□□□ 1.09
KNOP1-203ENST00000565844 NKTRP30414 1462 aaKnown RBP21.82■■□□□ 1.08
KNOP1-203ENST00000565844 ROBO1Q9Y6N7 1651 aa21.81■■□□□ 1.08
KNOP1-203ENST00000565844 NBPF8Q3BBV2 869 aa21.81■■□□□ 1.08
KNOP1-203ENST00000565844 SETD1AO15047 1707 aaKnown RBP21.81■■□□□ 1.08
KNOP1-203ENST00000565844 ADAMTS13Q76LX8 1427 aa21.8■■□□□ 1.08
KNOP1-203ENST00000565844 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
KNOP1-203ENST00000565844 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.08
KNOP1-203ENST00000565844 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
KNOP1-203ENST00000565844 MSH6P52701 1360 aa21.75■■□□□ 1.07
KNOP1-203ENST00000565844 TBX22Q9Y458 520 aa21.74■■□□□ 1.07
KNOP1-203ENST00000565844 C14orf93Q9H972 538 aaKnown RBP21.74■■□□□ 1.07
KNOP1-203ENST00000565844 ASXL1Q8IXJ9 1541 aa21.73■■□□□ 1.07
KNOP1-203ENST00000565844 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.72■■□□□ 1.07
KNOP1-203ENST00000565844 ROCK2O75116 1388 aaKnown RBP21.72■■□□□ 1.07
KNOP1-203ENST00000565844 C14orf37Q86TY3 774 aa21.72■■□□□ 1.07
KNOP1-203ENST00000565844 PTPRUQ92729 1446 aa21.71■■□□□ 1.07
KNOP1-203ENST00000565844 ADGRB1O14514 1584 aa21.71■■□□□ 1.07
KNOP1-203ENST00000565844 PHLPP1O60346 1717 aa21.7■■□□□ 1.06
KNOP1-203ENST00000565844 NBPF1Q3BBV0 1214 aa21.7■■□□□ 1.06
KNOP1-203ENST00000565844 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
KNOP1-203ENST00000565844 FAM135BQ49AJ0 1406 aa21.7■■□□□ 1.06
KNOP1-203ENST00000565844 SOCS7O14512 581 aa21.69■■□□□ 1.06
KNOP1-203ENST00000565844 METP08581 1390 aa21.69■■□□□ 1.06
KNOP1-203ENST00000565844 XRN1Q8IZH2 1706 aaKnown RBP21.67■■□□□ 1.06
KNOP1-203ENST00000565844 TMEM132EQ6IEE7 984 aa21.67■■□□□ 1.06
KNOP1-203ENST00000565844 AMOTL2Q9Y2J4 779 aa21.67■■□□□ 1.06
KNOP1-203ENST00000565844 GPRASP1Q5JY77 1395 aa21.66■■□□□ 1.06
KNOP1-203ENST00000565844 SLAIN2Q9P270 581 aa21.65■■□□□ 1.06
KNOP1-203ENST00000565844 KNDC1Q76NI1 1749 aa21.64■■□□□ 1.06
KNOP1-203ENST00000565844 CARD11Q9BXL7 1154 aa21.64■■□□□ 1.06
KNOP1-203ENST00000565844 PIK3R4Q99570 1358 aa21.64■■□□□ 1.06
KNOP1-203ENST00000565844 YTHDC2Q9H6S0 1430 aaKnown RBP21.63■■□□□ 1.05
KNOP1-203ENST00000565844 ARHGEF28Q8N1W1 1705 aaKnown RBP21.62■■□□□ 1.05
KNOP1-203ENST00000565844 LRPPRCP42704 1394 aaKnown RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms