RNA–Protein interactions for RNA: ENST00000565362.5

PDXDC1-211, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-211ENST00000565362 HDGFP51858 240 aaKnown RBP16.41■□□□□ 0.22
PDXDC1-211ENST00000565362 XIRP1Q702N8 1843 aaKnown RBP16.4■□□□□ 0.22
PDXDC1-211ENST00000565362 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
PDXDC1-211ENST00000565362 RRBP1Q9P2E9 1410 aaKnown RBP16.4■□□□□ 0.22
PDXDC1-211ENST00000565362 RIMS2Q9UQ26 1411 aa16.4■□□□□ 0.22
PDXDC1-211ENST00000565362 SOCS7O14512 581 aa16.4■□□□□ 0.22
PDXDC1-211ENST00000565362 TMEM94Q12767 1356 aa16.39■□□□□ 0.21
PDXDC1-211ENST00000565362 NWD1Q149M9 1564 aa16.38■□□□□ 0.21
PDXDC1-211ENST00000565362 NKTRP30414 1462 aaKnown RBP16.37■□□□□ 0.21
PDXDC1-211ENST00000565362 PROSER2Q86WR7 435 aaPredicted RBP16.37■□□□□ 0.21
PDXDC1-211ENST00000565362 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
PDXDC1-211ENST00000565362 MYO5BQ9ULV0 1848 aa16.37■□□□□ 0.21
PDXDC1-211ENST00000565362 BCANQ96GW7 911 aa16.36■□□□□ 0.21
PDXDC1-211ENST00000565362 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
PDXDC1-211ENST00000565362 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
PDXDC1-211ENST00000565362 MED1Q15648 1581 aaPredicted RBP16.35■□□□□ 0.21
PDXDC1-211ENST00000565362 PPP1R15AO75807 674 aaPredicted RBP16.35■□□□□ 0.21
PDXDC1-211ENST00000565362 CHGAP10645 457 aaKnown RBP16.35■□□□□ 0.21
PDXDC1-211ENST00000565362 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
PDXDC1-211ENST00000565362 NAIPQ13075 1403 aa16.32■□□□□ 0.2
PDXDC1-211ENST00000565362 RBM33Q96EV2 1170 aaKnown RBP16.32■□□□□ 0.2
PDXDC1-211ENST00000565362 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
PDXDC1-211ENST00000565362 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
PDXDC1-211ENST00000565362 NUTM2DQ5VT03 806 aaPredicted RBP16.3■□□□□ 0.2
PDXDC1-211ENST00000565362 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
PDXDC1-211ENST00000565362 NCOA3Q9Y6Q9 1424 aa16.29■□□□□ 0.2
PDXDC1-211ENST00000565362 MSH6P52701 1360 aa16.28■□□□□ 0.2
PDXDC1-211ENST00000565362 DIP2AQ14689 1571 aa16.28■□□□□ 0.2
PDXDC1-211ENST00000565362 SPHKAPQ2M3C7 1700 aa16.26■□□□□ 0.19
PDXDC1-211ENST00000565362 HFM1A2PYH4 1435 aa16.26■□□□□ 0.19
PDXDC1-211ENST00000565362 SLAIN2Q9P270 581 aa16.25■□□□□ 0.19
PDXDC1-211ENST00000565362 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
PDXDC1-211ENST00000565362 PTPRUQ92729 1446 aa16.23■□□□□ 0.19
PDXDC1-211ENST00000565362 PHF23Q9BUL5 403 aaPredicted RBP16.23■□□□□ 0.19
PDXDC1-211ENST00000565362 AMOTL2Q9Y2J4 779 aa16.23■□□□□ 0.19
PDXDC1-211ENST00000565362 TRPM2O94759 1503 aa16.23■□□□□ 0.19
PDXDC1-211ENST00000565362 SETBP1Q9Y6X0 1596 aa16.22■□□□□ 0.19
PDXDC1-211ENST00000565362 NRXN3Q9Y4C0 1643 aa16.21■□□□□ 0.19
PDXDC1-211ENST00000565362 ZNF326Q5BKZ1 582 aaKnown RBP16.21■□□□□ 0.19
PDXDC1-211ENST00000565362 C19orf44Q9H6X5 657 aa16.21■□□□□ 0.19
PDXDC1-211ENST00000565362 CLTCL1P53675 1640 aa16.2■□□□□ 0.18
PDXDC1-211ENST00000565362 CADPS2Q86UW7 1296 aa16.19■□□□□ 0.18
PDXDC1-211ENST00000565362 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
PDXDC1-211ENST00000565362 RGS17Q9UGC6 210 aaPredicted RBP16.19■□□□□ 0.18
PDXDC1-211ENST00000565362 NEXMIFQ5QGS0 1516 aa16.19■□□□□ 0.18
PDXDC1-211ENST00000565362 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
PDXDC1-211ENST00000565362 METP08581 1390 aa16.16■□□□□ 0.18
PDXDC1-211ENST00000565362 ATF3P18847 181 aa16.16■□□□□ 0.18
PDXDC1-211ENST00000565362 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
PDXDC1-211ENST00000565362 XRN1Q8IZH2 1706 aaKnown RBP16.16■□□□□ 0.18
PDXDC1-211ENST00000565362 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
PDXDC1-211ENST00000565362 JCADQ9P266 1359 aa16.14■□□□□ 0.17
PDXDC1-211ENST00000565362 DCCP43146 1447 aa16.14■□□□□ 0.17
PDXDC1-211ENST00000565362 KIF1BO60333 1816 aa16.14■□□□□ 0.17
PDXDC1-211ENST00000565362 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
PDXDC1-211ENST00000565362 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
PDXDC1-211ENST00000565362 PHLPP1O60346 1717 aa16.12■□□□□ 0.17
PDXDC1-211ENST00000565362 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
PDXDC1-211ENST00000565362 AHDC1Q5TGY3 1603 aaPredicted RBP16.11■□□□□ 0.17
PDXDC1-211ENST00000565362 BRINP3Q76B58 766 aa16.1■□□□□ 0.17
PDXDC1-211ENST00000565362 MST1RQ04912 1400 aa16.09■□□□□ 0.17
PDXDC1-211ENST00000565362 POTEAQ6S8J7 498 aa16.08■□□□□ 0.16
PDXDC1-211ENST00000565362 PRAG1Q86YV5 1406 aa16.08■□□□□ 0.16
PDXDC1-211ENST00000565362 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
PDXDC1-211ENST00000565362 FOXD1Q16676 465 aa16.07■□□□□ 0.16
PDXDC1-211ENST00000565362 MPHOSPH9Q99550 1183 aa16.07■□□□□ 0.16
PDXDC1-211ENST00000565362 SPATA31A6Q5VVP1 1343 aa16.07■□□□□ 0.16
PDXDC1-211ENST00000565362 SETD1AO15047 1707 aaKnown RBP16.06■□□□□ 0.16
PDXDC1-211ENST00000565362 PTCH1Q13635 1447 aa16.06■□□□□ 0.16
PDXDC1-211ENST00000565362 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
PDXDC1-211ENST00000565362 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
PDXDC1-211ENST00000565362 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
PDXDC1-211ENST00000565362 SPATA31E1Q6ZUB1 1445 aa16.03■□□□□ 0.16
PDXDC1-211ENST00000565362 PPLO60437 1756 aa16.03■□□□□ 0.16
PDXDC1-211ENST00000565362 ROBO2Q9HCK4 1378 aa16.03■□□□□ 0.16
PDXDC1-211ENST00000565362 LRP6O75581 1613 aa16.03■□□□□ 0.16
PDXDC1-211ENST00000565362 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
PDXDC1-211ENST00000565362 SHPRHQ149N8 1683 aa16.02■□□□□ 0.15
PDXDC1-211ENST00000565362 NALCNQ8IZF0 1738 aa16.01■□□□□ 0.15
PDXDC1-211ENST00000565362 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
PDXDC1-211ENST00000565362 C1orf167Q5SNV9 1468 aa16■□□□□ 0.15
PDXDC1-211ENST00000565362 NHSL1Q5SYE7 1610 aa16■□□□□ 0.15
PDXDC1-211ENST00000565362 ANKRD30BQ9BXX2 1392 aa16■□□□□ 0.15
PDXDC1-211ENST00000565362 RGL3Q3MIN7 710 aa15.99■□□□□ 0.15
PDXDC1-211ENST00000565362 LRRC59Q96AG4 307 aaKnown RBP15.99■□□□□ 0.15
PDXDC1-211ENST00000565362 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
PDXDC1-211ENST00000565362 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
PDXDC1-211ENST00000565362 DDX17Q92841 729 aaKnown RBP15.96■□□□□ 0.15
PDXDC1-211ENST00000565362 TECPR2O15040 1411 aa15.95■□□□□ 0.14
PDXDC1-211ENST00000565362 IFT172Q9UG01 1749 aa15.95■□□□□ 0.14
PDXDC1-211ENST00000565362 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
PDXDC1-211ENST00000565362 LAMC1P11047 1609 aa15.94■□□□□ 0.14
PDXDC1-211ENST00000565362 ORAI2Q96SN7 254 aa15.94■□□□□ 0.14
PDXDC1-211ENST00000565362 LRPPRCP42704 1394 aaKnown RBP15.94■□□□□ 0.14
PDXDC1-211ENST00000565362 PNPLA6Q8IY17 1366 aa15.94■□□□□ 0.14
PDXDC1-211ENST00000565362 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
PDXDC1-211ENST00000565362 SOS2Q07890 1332 aaPredicted RBP15.94■□□□□ 0.14
PDXDC1-211ENST00000565362 RAB3GAP2Q9H2M9 1393 aa15.93■□□□□ 0.14
PDXDC1-211ENST00000565362 NUTM2BA6NNL0 878 aaPredicted RBP15.92■□□□□ 0.14
PDXDC1-211ENST00000565362 NUTM2EB1AL46 878 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms