RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 CD109Q6YHK3 1445 aa21.16■□□□□ 0.98
LINC00554-201ENST00000564841 BRD4O60885 1362 aaPredicted RBP21.15■□□□□ 0.98
LINC00554-201ENST00000564841 KDM5DQ9BY66 1539 aa21.12■□□□□ 0.97
LINC00554-201ENST00000564841 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
LINC00554-201ENST00000564841 MAST1Q9Y2H9 1570 aa21.11■□□□□ 0.97
LINC00554-201ENST00000564841 PDE3BQ13370 1112 aa21.1■□□□□ 0.97
LINC00554-201ENST00000564841 ERBINQ96RT1 1412 aa21.1■□□□□ 0.97
LINC00554-201ENST00000564841 SEC24BO95487 1268 aa21.1■□□□□ 0.97
LINC00554-201ENST00000564841 KTN1Q86UP2 1357 aaKnown RBP21.1■□□□□ 0.97
LINC00554-201ENST00000564841 RALBP1Q15311 655 aa21.1■□□□□ 0.97
LINC00554-201ENST00000564841 PANK2Q9BZ23 570 aa21.1■□□□□ 0.97
LINC00554-201ENST00000564841 ARID4BQ4LE39 1312 aaPredicted RBP21.09■□□□□ 0.97
LINC00554-201ENST00000564841 GZF1Q9H116 711 aaPredicted RBP21.09■□□□□ 0.97
LINC00554-201ENST00000564841 PLXNC1O60486 1568 aa21.08■□□□□ 0.97
LINC00554-201ENST00000564841 NLRP13Q86W25 1043 aa21.07■□□□□ 0.96
LINC00554-201ENST00000564841 KANK1Q14678 1352 aa21.07■□□□□ 0.96
LINC00554-201ENST00000564841 CENPQQ7L2Z9 268 aaPredicted RBP21.07■□□□□ 0.96
LINC00554-201ENST00000564841 ZFYVE16Q7Z3T8 1539 aa21.07■□□□□ 0.96
LINC00554-201ENST00000564841 ATP7AQ04656 1500 aa21.06■□□□□ 0.96
LINC00554-201ENST00000564841 GLIPR1L2Q4G1C9 344 aa21.06■□□□□ 0.96
LINC00554-201ENST00000564841 SPRYD3Q8NCJ5 442 aa21.05■□□□□ 0.96
LINC00554-201ENST00000564841 HSP90AA2PQ14568 343 aaPredicted RBP21.05■□□□□ 0.96
LINC00554-201ENST00000564841 NUTM2DQ5VT03 806 aaPredicted RBP21.05■□□□□ 0.96
LINC00554-201ENST00000564841 A2MP01023 1474 aa21.05■□□□□ 0.96
LINC00554-201ENST00000564841 CFAP65Q6ZU64 1925 aaKnown RBP21.05■□□□□ 0.96
LINC00554-201ENST00000564841 ABCA9Q8IUA7 1624 aa21.05■□□□□ 0.96
LINC00554-201ENST00000564841 FAM69CQ0P6D2 419 aa21.04■□□□□ 0.96
LINC00554-201ENST00000564841 UNC13BO14795 1591 aa21.04■□□□□ 0.96
LINC00554-201ENST00000564841 XRCC6P12956 609 aaKnown RBP eCLIP21.04■□□□□ 0.96
LINC00554-201ENST00000564841 USP19O94966 1318 aa21.03■□□□□ 0.96
LINC00554-201ENST00000564841 PANK3Q9H999 370 aa21.03■□□□□ 0.96
LINC00554-201ENST00000564841 PNNQ9H307 717 aaKnown RBP21.02■□□□□ 0.96
LINC00554-201ENST00000564841 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
LINC00554-201ENST00000564841 RTEL1-TNFRSF6BF6WH68 1400 aa21.01■□□□□ 0.95
LINC00554-201ENST00000564841 PRAG1Q86YV5 1406 aa21.01■□□□□ 0.95
LINC00554-201ENST00000564841 UHRF1BP1Q6BDS2 1440 aa21.01■□□□□ 0.95
LINC00554-201ENST00000564841 KDM5CP41229 1560 aa21.01■□□□□ 0.95
LINC00554-201ENST00000564841 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
LINC00554-201ENST00000564841 HSP90AA1P07900 732 aaKnown RBP20.98■□□□□ 0.95
LINC00554-201ENST00000564841 ADAMTS8Q9UP79 889 aa20.97■□□□□ 0.95
LINC00554-201ENST00000564841 UGGT1Q9NYU2 1555 aa20.96■□□□□ 0.95
LINC00554-201ENST00000564841 IGHDP01880 384 aa20.96■□□□□ 0.95
LINC00554-201ENST00000564841 DISP3Q9P2K9 1392 aa20.96■□□□□ 0.95
LINC00554-201ENST00000564841 ARAP3Q8WWN8 1544 aa20.95■□□□□ 0.94
LINC00554-201ENST00000564841 ZNF518AQ6AHZ1 1483 aa20.95■□□□□ 0.94
LINC00554-201ENST00000564841 ATP10AO60312 1499 aa20.95■□□□□ 0.94
LINC00554-201ENST00000564841 CFAP70Q5T0N1 1121 aa20.94■□□□□ 0.94
LINC00554-201ENST00000564841 L1TD1Q5T7N2 865 aaKnown RBP20.94■□□□□ 0.94
LINC00554-201ENST00000564841 PER1O15534 1290 aaPredicted RBP20.94■□□□□ 0.94
LINC00554-201ENST00000564841 PARD3Q8TEW0 1356 aa20.93■□□□□ 0.94
LINC00554-201ENST00000564841 MLECQ14165 292 aa20.93■□□□□ 0.94
LINC00554-201ENST00000564841 E9PCH4 1651 aa20.93■□□□□ 0.94
LINC00554-201ENST00000564841 DUSP27Q5VZP5 1158 aa20.93■□□□□ 0.94
LINC00554-201ENST00000564841 MAGI2Q86UL8 1455 aa20.91■□□□□ 0.94
LINC00554-201ENST00000564841 GOLGA6L3A6NEY3 463 aa20.91■□□□□ 0.94
LINC00554-201ENST00000564841 BCAR3O75815 825 aa20.91■□□□□ 0.94
LINC00554-201ENST00000564841 ADGRF5Q8IZF2 1346 aa20.9■□□□□ 0.94
LINC00554-201ENST00000564841 INO80Q9ULG1 1556 aaPredicted RBP20.9■□□□□ 0.94
LINC00554-201ENST00000564841 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
LINC00554-201ENST00000564841 CLCN1P35523 988 aa20.89■□□□□ 0.94
LINC00554-201ENST00000564841 ANTXR1Q9H6X2 564 aa20.89■□□□□ 0.94
LINC00554-201ENST00000564841 POGZQ7Z3K3 1410 aa20.89■□□□□ 0.94
LINC00554-201ENST00000564841 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
LINC00554-201ENST00000564841 CCDC146Q8IYE0 955 aa20.89■□□□□ 0.93
LINC00554-201ENST00000564841 TESK2Q96S53 571 aa20.88■□□□□ 0.93
LINC00554-201ENST00000564841 TMF1P82094 1093 aa20.87■□□□□ 0.93
LINC00554-201ENST00000564841 SPINK5Q9NQ38 1064 aaPredicted RBP20.87■□□□□ 0.93
LINC00554-201ENST00000564841 RRP9O43818 475 aaKnown RBP20.87■□□□□ 0.93
LINC00554-201ENST00000564841 ERBB4Q15303 1308 aa20.86■□□□□ 0.93
LINC00554-201ENST00000564841 BECN1Q14457 450 aa20.85■□□□□ 0.93
LINC00554-201ENST00000564841 TMEM132EQ6IEE7 984 aa20.85■□□□□ 0.93
LINC00554-201ENST00000564841 TBC1D2Q9BYX2 928 aa20.84■□□□□ 0.93
LINC00554-201ENST00000564841 YEATS2Q9ULM3 1422 aa20.84■□□□□ 0.93
LINC00554-201ENST00000564841 CLTCL1P53675 1640 aa20.83■□□□□ 0.93
LINC00554-201ENST00000564841 TRPM1Q7Z4N2 1603 aa20.83■□□□□ 0.93
LINC00554-201ENST00000564841 FSD2A1L4K1 749 aa20.83■□□□□ 0.93
LINC00554-201ENST00000564841 PLEKHG5O94827 1062 aa20.83■□□□□ 0.92
LINC00554-201ENST00000564841 BLMP54132 1417 aaPredicted RBP20.82■□□□□ 0.92
LINC00554-201ENST00000564841 TSPOAP1O95153 1857 aa20.82■□□□□ 0.92
LINC00554-201ENST00000564841 TRAK1Q9UPV9 953 aa20.82■□□□□ 0.92
LINC00554-201ENST00000564841 SAFB2Q14151 953 aaKnown RBP eCLIP20.8■□□□□ 0.92
LINC00554-201ENST00000564841 GOLGA2Q08379 1002 aa20.8■□□□□ 0.92
LINC00554-201ENST00000564841 PRDM15P57071 1507 aaPredicted RBP20.8■□□□□ 0.92
LINC00554-201ENST00000564841 RIMBP3CA6NJZ7 1639 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 RIMBP3BA6NNM3 1639 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 RIMBP3Q9UFD9 1639 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 PTPRTO14522 1441 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 MCM4P33991 863 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 TRPM2O94759 1503 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 SPHKAPQ2M3C7 1700 aa20.79■□□□□ 0.92
LINC00554-201ENST00000564841 FBXO31Q5XUX0 539 aaPredicted RBP20.78■□□□□ 0.92
LINC00554-201ENST00000564841 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.78■□□□□ 0.92
LINC00554-201ENST00000564841 PANK1Q8TE04 598 aa20.78■□□□□ 0.92
LINC00554-201ENST00000564841 KNSTRNQ9Y448 316 aa20.78■□□□□ 0.92
LINC00554-201ENST00000564841 COG6Q9Y2V7 657 aa20.78■□□□□ 0.92
LINC00554-201ENST00000564841 TET3O43151 1660 aa20.77■□□□□ 0.92
LINC00554-201ENST00000564841 CEP152O94986 1710 aa20.77■□□□□ 0.92
LINC00554-201ENST00000564841 NPATQ14207 1427 aa20.77■□□□□ 0.92
LINC00554-201ENST00000564841 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms