RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 FAM50AQ14320 339 aaKnown RBP38.73■■■■□ 3.79
CYLD-208ENST00000564634 MYO5BQ9ULV0 1848 aa38.71■■■■□ 3.79
CYLD-208ENST00000564634 PPARGC1BQ86YN6 1023 aaKnown RBP38.71■■■■□ 3.79
CYLD-208ENST00000564634 SLC52A1Q9NWF4 448 aa38.71■■■■□ 3.79
CYLD-208ENST00000564634 ANKRD50Q9ULJ7 1429 aa38.7■■■■□ 3.79
CYLD-208ENST00000564634 GCC2Q8IWJ2 1684 aa38.69■■■■□ 3.78
CYLD-208ENST00000564634 RPRD2Q5VT52 1461 aaKnown RBP38.69■■■■□ 3.78
CYLD-208ENST00000564634 ZFYVE9O95405 1425 aa38.66■■■■□ 3.78
CYLD-208ENST00000564634 MSH6P52701 1360 aa38.65■■■■□ 3.78
CYLD-208ENST00000564634 RIMS2Q9UQ26 1411 aa38.63■■■■□ 3.77
CYLD-208ENST00000564634 PLEKHG1Q9ULL1 1385 aa38.61■■■■□ 3.77
CYLD-208ENST00000564634 PPP1R15AO75807 674 aaPredicted RBP38.61■■■■□ 3.77
CYLD-208ENST00000564634 TMEM131LA2VDJ0 1609 aa38.6■■■■□ 3.77
CYLD-208ENST00000564634 POTEAQ6S8J7 498 aa38.59■■■■□ 3.77
CYLD-208ENST00000564634 PHLPP1O60346 1717 aa38.58■■■■□ 3.77
CYLD-208ENST00000564634 CHD2O14647 1828 aaKnown RBP38.58■■■■□ 3.77
CYLD-208ENST00000564634 UNC13BO14795 1591 aa38.56■■■■□ 3.76
CYLD-208ENST00000564634 SLAIN2Q9P270 581 aa38.53■■■■□ 3.76
CYLD-208ENST00000564634 CHGAP10645 457 aaKnown RBP38.52■■■■□ 3.76
CYLD-208ENST00000564634 E9PCH4 1651 aa38.49■■■■□ 3.75
CYLD-208ENST00000564634 HDGFP51858 240 aaKnown RBP38.47■■■■□ 3.75
CYLD-208ENST00000564634 NUTM2DQ5VT03 806 aaPredicted RBP38.47■■■■□ 3.75
CYLD-208ENST00000564634 JCADQ9P266 1359 aa38.44■■■■□ 3.74
CYLD-208ENST00000564634 COL16A1Q07092 1604 aaPredicted RBP38.44■■■■□ 3.74
CYLD-208ENST00000564634 C14orf37Q86TY3 774 aa38.43■■■■□ 3.74
CYLD-208ENST00000564634 SETD1AO15047 1707 aaKnown RBP38.43■■■■□ 3.74
CYLD-208ENST00000564634 ADAMTS13Q76LX8 1427 aa38.42■■■■□ 3.74
CYLD-208ENST00000564634 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.41■■■■□ 3.74
CYLD-208ENST00000564634 TBX22Q9Y458 520 aa38.41■■■■□ 3.74
CYLD-208ENST00000564634 IQGAP3Q86VI3 1631 aa38.4■■■■□ 3.74
CYLD-208ENST00000564634 DIP2AQ14689 1571 aa38.4■■■■□ 3.74
CYLD-208ENST00000564634 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.36■■■■□ 3.73
CYLD-208ENST00000564634 NCOA3Q9Y6Q9 1424 aa38.35■■■■□ 3.73
CYLD-208ENST00000564634 RRBP1Q9P2E9 1410 aaKnown RBP38.34■■■■□ 3.73
CYLD-208ENST00000564634 ROCK1Q13464 1354 aa38.32■■■■□ 3.73
CYLD-208ENST00000564634 LRP6O75581 1613 aa38.32■■■■□ 3.73
CYLD-208ENST00000564634 TRPM2O94759 1503 aa38.3■■■■□ 3.72
CYLD-208ENST00000564634 PIK3R4Q99570 1358 aa38.29■■■■□ 3.72
CYLD-208ENST00000564634 AHDC1Q5TGY3 1603 aaPredicted RBP38.28■■■■□ 3.72
CYLD-208ENST00000564634 ITGAEP38570 1179 aa38.27■■■■□ 3.72
CYLD-208ENST00000564634 NUP155O75694 1391 aa38.27■■■■□ 3.72
CYLD-208ENST00000564634 ATF3P18847 181 aa38.26■■■■□ 3.72
CYLD-208ENST00000564634 CADPS2Q86UW7 1296 aa38.26■■■■□ 3.72
CYLD-208ENST00000564634 PTPRUQ92729 1446 aa38.25■■■■□ 3.71
CYLD-208ENST00000564634 C19orf44Q9H6X5 657 aa38.24■■■■□ 3.71
CYLD-208ENST00000564634 MEX3CQ5U5Q3 659 aaKnown RBP38.23■■■■□ 3.71
CYLD-208ENST00000564634 SPATA31A6Q5VVP1 1343 aa38.22■■■■□ 3.71
CYLD-208ENST00000564634 SHPRHQ149N8 1683 aa38.22■■■■□ 3.71
CYLD-208ENST00000564634 AMOTL2Q9Y2J4 779 aa38.21■■■■□ 3.71
CYLD-208ENST00000564634 NRXN3Q9Y4C0 1643 aa38.18■■■■□ 3.7
CYLD-208ENST00000564634 XRN1Q8IZH2 1706 aaKnown RBP38.16■■■■□ 3.7
CYLD-208ENST00000564634 SPHKAPQ2M3C7 1700 aa38.15■■■■□ 3.7
CYLD-208ENST00000564634 BRINP3Q76B58 766 aa38.14■■■■□ 3.7
CYLD-208ENST00000564634 SETBP1Q9Y6X0 1596 aa38.12■■■■□ 3.69
CYLD-208ENST00000564634 ASXL1Q8IXJ9 1541 aa38.1■■■■□ 3.69
CYLD-208ENST00000564634 DCCP43146 1447 aa38.1■■■■□ 3.69
CYLD-208ENST00000564634 ZNF772Q68DY9 489 aaPredicted RBP38.09■■■■□ 3.69
CYLD-208ENST00000564634 TRIM52Q96A61 297 aa38.09■■■■□ 3.69
CYLD-208ENST00000564634 ZNF326Q5BKZ1 582 aaKnown RBP38.07■■■■□ 3.68
CYLD-208ENST00000564634 NUTM2BA6NNL0 878 aaPredicted RBP38.06■■■■□ 3.68
CYLD-208ENST00000564634 NUTM2EB1AL46 878 aaPredicted RBP38.06■■■■□ 3.68
CYLD-208ENST00000564634 NUTM2AQ8IVF1 878 aaPredicted RBP38.06■■■■□ 3.68
CYLD-208ENST00000564634 MST1RQ04912 1400 aa38.04■■■■□ 3.68
CYLD-208ENST00000564634 METP08581 1390 aa38.03■■■■□ 3.68
CYLD-208ENST00000564634 NHSL1Q5SYE7 1610 aa38.01■■■■□ 3.68
CYLD-208ENST00000564634 CLTCL1P53675 1640 aa37.99■■■■□ 3.67
CYLD-208ENST00000564634 NEXMIFQ5QGS0 1516 aa37.97■■■■□ 3.67
CYLD-208ENST00000564634 NALCNQ8IZF0 1738 aa37.96■■■■□ 3.67
CYLD-208ENST00000564634 SETD5Q9C0A6 1442 aa37.95■■■■□ 3.67
CYLD-208ENST00000564634 UPF1Q92900 1129 aaKnown RBP eCLIP37.95■■■■□ 3.67
CYLD-208ENST00000564634 ADGRL3Q9HAR2 1447 aa37.95■■■■□ 3.67
CYLD-208ENST00000564634 RXRBP28702 533 aa37.92■■■■□ 3.66
CYLD-208ENST00000564634 AFF2P51816 1311 aa37.91■■■■□ 3.66
CYLD-208ENST00000564634 DDX17Q92841 729 aaKnown RBP37.91■■■■□ 3.66
CYLD-208ENST00000564634 NAIPQ13075 1403 aa37.87■■■■□ 3.65
CYLD-208ENST00000564634 KIF1BO60333 1816 aa37.85■■■■□ 3.65
CYLD-208ENST00000564634 PNPLA6Q8IY17 1366 aa37.84■■■■□ 3.65
CYLD-208ENST00000564634 LRRC59Q96AG4 307 aaKnown RBP37.84■■■■□ 3.65
CYLD-208ENST00000564634 CDK12Q9NYV4 1490 aaPredicted RBP37.84■■■■□ 3.65
CYLD-208ENST00000564634 HFM1A2PYH4 1435 aa37.83■■■■□ 3.65
CYLD-208ENST00000564634 C8orf37Q96NL8 207 aa37.82■■■■□ 3.64
CYLD-208ENST00000564634 C1orf167Q5SNV9 1468 aa37.77■■■■□ 3.64
CYLD-208ENST00000564634 RGS12O14924 1447 aa37.75■■■■□ 3.63
CYLD-208ENST00000564634 PTCH1Q13635 1447 aa37.74■■■■□ 3.63
CYLD-208ENST00000564634 ROBO2Q9HCK4 1378 aa37.72■■■■□ 3.63
CYLD-208ENST00000564634 ADAMTS2O95450 1211 aa37.69■■■■□ 3.62
CYLD-208ENST00000564634 QTRT2Q9H974 415 aaKnown RBP37.69■■■■□ 3.62
CYLD-208ENST00000564634 LAMC1P11047 1609 aa37.69■■■■□ 3.62
CYLD-208ENST00000564634 RBM6P78332 1123 aaKnown RBP37.66■■■■□ 3.62
CYLD-208ENST00000564634 ORAI2Q96SN7 254 aa37.66■■■■□ 3.62
CYLD-208ENST00000564634 VGFO15240 615 aaPredicted RBP37.65■■■■□ 3.62
CYLD-208ENST00000564634 NGLY1Q96IV0 654 aa37.63■■■■□ 3.61
CYLD-208ENST00000564634 PPLO60437 1756 aa37.61■■■■□ 3.61
CYLD-208ENST00000564634 PRAG1Q86YV5 1406 aa37.6■■■■□ 3.61
CYLD-208ENST00000564634 SOS2Q07890 1332 aaPredicted RBP37.6■■■■□ 3.61
CYLD-208ENST00000564634 SLC4A1APQ9BWU0 796 aaKnown RBP37.55■■■■□ 3.6
CYLD-208ENST00000564634 RPGRIP1LQ68CZ1 1315 aa37.54■■■■□ 3.6
CYLD-208ENST00000564634 USP21Q9UK80 565 aa37.51■■■■□ 3.6
CYLD-208ENST00000564634 COL22A1Q8NFW1 1626 aaPredicted RBP37.5■■■■□ 3.59
CYLD-208ENST00000564634 CDC42BPGQ6DT37 1551 aa37.5■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms