RNA–Protein interactions for RNA: ENST00000564566.1

USP10-211, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 4

Gene USP10, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-211ENST00000564566 GCC2Q8IWJ2 1684 aa26.41■■□□□ 1.82
USP10-211ENST00000564566 RGS17Q9UGC6 210 aaPredicted RBP26.41■■□□□ 1.82
USP10-211ENST00000564566 NKTRP30414 1462 aaKnown RBP26.41■■□□□ 1.82
USP10-211ENST00000564566 SLC52A1Q9NWF4 448 aa26.38■■□□□ 1.81
USP10-211ENST00000564566 ANKRD50Q9ULJ7 1429 aa26.38■■□□□ 1.81
USP10-211ENST00000564566 RPRD2Q5VT52 1461 aaKnown RBP26.36■■□□□ 1.81
USP10-211ENST00000564566 MSH6P52701 1360 aa26.35■■□□□ 1.81
USP10-211ENST00000564566 PPP1R15AO75807 674 aaPredicted RBP26.34■■□□□ 1.81
USP10-211ENST00000564566 PHLPP1O60346 1717 aa26.34■■□□□ 1.81
USP10-211ENST00000564566 ZFYVE9O95405 1425 aa26.32■■□□□ 1.8
USP10-211ENST00000564566 CHD2O14647 1828 aaKnown RBP26.32■■□□□ 1.8
USP10-211ENST00000564566 TMEM131LA2VDJ0 1609 aa26.32■■□□□ 1.8
USP10-211ENST00000564566 RIMS2Q9UQ26 1411 aa26.31■■□□□ 1.8
USP10-211ENST00000564566 PLEKHG1Q9ULL1 1385 aa26.31■■□□□ 1.8
USP10-211ENST00000564566 UNC13BO14795 1591 aa26.29■■□□□ 1.8
USP10-211ENST00000564566 CHGAP10645 457 aaKnown RBP26.28■■□□□ 1.8
USP10-211ENST00000564566 POTEAQ6S8J7 498 aa26.27■■□□□ 1.8
USP10-211ENST00000564566 E9PCH4 1651 aa26.25■■□□□ 1.79
USP10-211ENST00000564566 SLAIN2Q9P270 581 aa26.25■■□□□ 1.79
USP10-211ENST00000564566 HDGFP51858 240 aaKnown RBP26.24■■□□□ 1.79
USP10-211ENST00000564566 NUTM2DQ5VT03 806 aaPredicted RBP26.23■■□□□ 1.79
USP10-211ENST00000564566 C14orf37Q86TY3 774 aa26.23■■□□□ 1.79
USP10-211ENST00000564566 SETD1AO15047 1707 aaKnown RBP26.22■■□□□ 1.79
USP10-211ENST00000564566 JCADQ9P266 1359 aa26.2■■□□□ 1.79
USP10-211ENST00000564566 COL16A1Q07092 1604 aaPredicted RBP26.2■■□□□ 1.78
USP10-211ENST00000564566 IQGAP3Q86VI3 1631 aa26.18■■□□□ 1.78
USP10-211ENST00000564566 DIP2AQ14689 1571 aa26.18■■□□□ 1.78
USP10-211ENST00000564566 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.18■■□□□ 1.78
USP10-211ENST00000564566 TBX22Q9Y458 520 aa26.17■■□□□ 1.78
USP10-211ENST00000564566 ADAMTS13Q76LX8 1427 aa26.16■■□□□ 1.78
USP10-211ENST00000564566 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.16■■□□□ 1.78
USP10-211ENST00000564566 TRPM2O94759 1503 aa26.12■■□□□ 1.77
USP10-211ENST00000564566 NCOA3Q9Y6Q9 1424 aa26.12■■□□□ 1.77
USP10-211ENST00000564566 ROCK1Q13464 1354 aa26.11■■□□□ 1.77
USP10-211ENST00000564566 LRP6O75581 1613 aa26.1■■□□□ 1.77
USP10-211ENST00000564566 ITGAEP38570 1179 aa26.1■■□□□ 1.77
USP10-211ENST00000564566 NUP155O75694 1391 aa26.09■■□□□ 1.77
USP10-211ENST00000564566 ATF3P18847 181 aa26.09■■□□□ 1.77
USP10-211ENST00000564566 MEX3CQ5U5Q3 659 aaKnown RBP26.09■■□□□ 1.77
USP10-211ENST00000564566 AHDC1Q5TGY3 1603 aaPredicted RBP26.09■■□□□ 1.77
USP10-211ENST00000564566 CADPS2Q86UW7 1296 aa26.08■■□□□ 1.77
USP10-211ENST00000564566 PIK3R4Q99570 1358 aa26.07■■□□□ 1.76
USP10-211ENST00000564566 SHPRHQ149N8 1683 aa26.06■■□□□ 1.76
USP10-211ENST00000564566 C19orf44Q9H6X5 657 aa26.06■■□□□ 1.76
USP10-211ENST00000564566 AMOTL2Q9Y2J4 779 aa26.05■■□□□ 1.76
USP10-211ENST00000564566 SPATA31A6Q5VVP1 1343 aa26.05■■□□□ 1.76
USP10-211ENST00000564566 SPHKAPQ2M3C7 1700 aa26.05■■□□□ 1.76
USP10-211ENST00000564566 PTPRUQ92729 1446 aa26.05■■□□□ 1.76
USP10-211ENST00000564566 NRXN3Q9Y4C0 1643 aa26.02■■□□□ 1.76
USP10-211ENST00000564566 XRN1Q8IZH2 1706 aaKnown RBP26.01■■□□□ 1.75
USP10-211ENST00000564566 BRINP3Q76B58 766 aa25.98■■□□□ 1.75
USP10-211ENST00000564566 SETBP1Q9Y6X0 1596 aa25.98■■□□□ 1.75
USP10-211ENST00000564566 ZNF326Q5BKZ1 582 aaKnown RBP25.97■■□□□ 1.75
USP10-211ENST00000564566 TRIM52Q96A61 297 aa25.97■■□□□ 1.75
USP10-211ENST00000564566 ASXL1Q8IXJ9 1541 aa25.97■■□□□ 1.75
USP10-211ENST00000564566 NUTM2BA6NNL0 878 aaPredicted RBP25.96■■□□□ 1.75
USP10-211ENST00000564566 NUTM2EB1AL46 878 aaPredicted RBP25.96■■□□□ 1.75
USP10-211ENST00000564566 ZNF772Q68DY9 489 aaPredicted RBP25.96■■□□□ 1.75
USP10-211ENST00000564566 PPARGC1BQ86YN6 1023 aaKnown RBP25.96■■□□□ 1.75
USP10-211ENST00000564566 NUTM2AQ8IVF1 878 aaPredicted RBP25.96■■□□□ 1.75
USP10-211ENST00000564566 DCCP43146 1447 aa25.96■■□□□ 1.75
USP10-211ENST00000564566 NHSL1Q5SYE7 1610 aa25.92■■□□□ 1.74
USP10-211ENST00000564566 MST1RQ04912 1400 aa25.91■■□□□ 1.74
USP10-211ENST00000564566 METP08581 1390 aa25.91■■□□□ 1.74
USP10-211ENST00000564566 CLTCL1P53675 1640 aa25.91■■□□□ 1.74
USP10-211ENST00000564566 NALCNQ8IZF0 1738 aa25.89■■□□□ 1.74
USP10-211ENST00000564566 NEXMIFQ5QGS0 1516 aa25.88■■□□□ 1.73
USP10-211ENST00000564566 ADGRL3Q9HAR2 1447 aa25.86■■□□□ 1.73
USP10-211ENST00000564566 KIF1BO60333 1816 aa25.86■■□□□ 1.73
USP10-211ENST00000564566 RXRBP28702 533 aa25.85■■□□□ 1.73
USP10-211ENST00000564566 SETD5Q9C0A6 1442 aa25.85■■□□□ 1.73
USP10-211ENST00000564566 UPF1Q92900 1129 aaKnown RBP eCLIP25.84■■□□□ 1.73
USP10-211ENST00000564566 AFF2P51816 1311 aa25.84■■□□□ 1.73
USP10-211ENST00000564566 DDX17Q92841 729 aaKnown RBP25.83■■□□□ 1.73
USP10-211ENST00000564566 LRRC59Q96AG4 307 aaKnown RBP25.8■■□□□ 1.72
USP10-211ENST00000564566 C8orf37Q96NL8 207 aa25.79■■□□□ 1.72
USP10-211ENST00000564566 PNPLA6Q8IY17 1366 aa25.78■■□□□ 1.72
USP10-211ENST00000564566 CDK12Q9NYV4 1490 aaPredicted RBP25.78■■□□□ 1.72
USP10-211ENST00000564566 C1orf167Q5SNV9 1468 aa25.73■■□□□ 1.71
USP10-211ENST00000564566 RGS12O14924 1447 aa25.72■■□□□ 1.71
USP10-211ENST00000564566 NAIPQ13075 1403 aa25.72■■□□□ 1.71
USP10-211ENST00000564566 PTCH1Q13635 1447 aa25.72■■□□□ 1.71
USP10-211ENST00000564566 ADAMTS2O95450 1211 aa25.7■■□□□ 1.7
USP10-211ENST00000564566 ROBO2Q9HCK4 1378 aa25.69■■□□□ 1.7
USP10-211ENST00000564566 QTRT2Q9H974 415 aaKnown RBP25.69■■□□□ 1.7
USP10-211ENST00000564566 RRBP1Q9P2E9 1410 aaKnown RBP25.69■■□□□ 1.7
USP10-211ENST00000564566 LAMC1P11047 1609 aa25.68■■□□□ 1.7
USP10-211ENST00000564566 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
USP10-211ENST00000564566 PPLO60437 1756 aa25.67■■□□□ 1.7
USP10-211ENST00000564566 RBM6P78332 1123 aaKnown RBP25.66■■□□□ 1.7
USP10-211ENST00000564566 NGLY1Q96IV0 654 aa25.66■■□□□ 1.7
USP10-211ENST00000564566 ORAI2Q96SN7 254 aa25.66■■□□□ 1.7
USP10-211ENST00000564566 SOS2Q07890 1332 aaPredicted RBP25.61■■□□□ 1.69
USP10-211ENST00000564566 SLC4A1APQ9BWU0 796 aaKnown RBP25.6■■□□□ 1.69
USP10-211ENST00000564566 HFM1A2PYH4 1435 aa25.6■■□□□ 1.69
USP10-211ENST00000564566 PRAG1Q86YV5 1406 aa25.59■■□□□ 1.69
USP10-211ENST00000564566 RPGRIP1LQ68CZ1 1315 aa25.59■■□□□ 1.69
USP10-211ENST00000564566 USP21Q9UK80 565 aa25.58■■□□□ 1.69
USP10-211ENST00000564566 COL22A1Q8NFW1 1626 aaPredicted RBP25.57■■□□□ 1.68
USP10-211ENST00000564566 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms