RNA–Protein interactions for RNA: ENST00000564544.1

COX4I1-206, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 3

Gene COX4I1, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-206ENST00000564544 MSH6P52701 1360 aa21.07■□□□□ 0.96
COX4I1-206ENST00000564544 NWD1Q149M9 1564 aa21.05■□□□□ 0.96
COX4I1-206ENST00000564544 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
COX4I1-206ENST00000564544 PLEKHG1Q9ULL1 1385 aa21.03■□□□□ 0.96
COX4I1-206ENST00000564544 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
COX4I1-206ENST00000564544 FAM50AQ14320 339 aaKnown RBP21.02■□□□□ 0.96
COX4I1-206ENST00000564544 SLAIN2Q9P270 581 aa21.02■□□□□ 0.96
COX4I1-206ENST00000564544 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.01■□□□□ 0.95
COX4I1-206ENST00000564544 RBM33Q96EV2 1170 aaKnown RBP21.01■□□□□ 0.95
COX4I1-206ENST00000564544 ROBO1Q9Y6N7 1651 aa21.01■□□□□ 0.95
COX4I1-206ENST00000564544 ZFYVE9O95405 1425 aa21■□□□□ 0.95
COX4I1-206ENST00000564544 RIMS2Q9UQ26 1411 aa20.99■□□□□ 0.95
COX4I1-206ENST00000564544 NCOA3Q9Y6Q9 1424 aa20.98■□□□□ 0.95
COX4I1-206ENST00000564544 POTEAQ6S8J7 498 aa20.98■□□□□ 0.95
COX4I1-206ENST00000564544 TBX22Q9Y458 520 aa20.98■□□□□ 0.95
COX4I1-206ENST00000564544 JCADQ9P266 1359 aa20.97■□□□□ 0.95
COX4I1-206ENST00000564544 CHGAP10645 457 aaKnown RBP20.93■□□□□ 0.94
COX4I1-206ENST00000564544 C14orf37Q86TY3 774 aa20.93■□□□□ 0.94
COX4I1-206ENST00000564544 PIK3R4Q99570 1358 aa20.92■□□□□ 0.94
COX4I1-206ENST00000564544 TMEM131LA2VDJ0 1609 aa20.91■□□□□ 0.94
COX4I1-206ENST00000564544 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
COX4I1-206ENST00000564544 CHD2O14647 1828 aaKnown RBP20.9■□□□□ 0.94
COX4I1-206ENST00000564544 PHLPP1O60346 1717 aa20.9■□□□□ 0.94
COX4I1-206ENST00000564544 SPATA31A6Q5VVP1 1343 aa20.89■□□□□ 0.93
COX4I1-206ENST00000564544 C19orf44Q9H6X5 657 aa20.89■□□□□ 0.93
COX4I1-206ENST00000564544 GCC2Q8IWJ2 1684 aa20.89■□□□□ 0.93
COX4I1-206ENST00000564544 ROCK1Q13464 1354 aa20.88■□□□□ 0.93
COX4I1-206ENST00000564544 ATF3P18847 181 aa20.88■□□□□ 0.93
COX4I1-206ENST00000564544 UNC13BO14795 1591 aa20.88■□□□□ 0.93
COX4I1-206ENST00000564544 DIP2AQ14689 1571 aa20.88■□□□□ 0.93
COX4I1-206ENST00000564544 ADAMTS13Q76LX8 1427 aa20.87■□□□□ 0.93
COX4I1-206ENST00000564544 MEX3CQ5U5Q3 659 aaKnown RBP20.84■□□□□ 0.93
COX4I1-206ENST00000564544 ZNF772Q68DY9 489 aaPredicted RBP20.84■□□□□ 0.93
COX4I1-206ENST00000564544 MYO5BQ9ULV0 1848 aa20.83■□□□□ 0.93
COX4I1-206ENST00000564544 COL16A1Q07092 1604 aaPredicted RBP20.83■□□□□ 0.93
COX4I1-206ENST00000564544 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
COX4I1-206ENST00000564544 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
COX4I1-206ENST00000564544 TRPM2O94759 1503 aa20.81■□□□□ 0.92
COX4I1-206ENST00000564544 NUP155O75694 1391 aa20.81■□□□□ 0.92
COX4I1-206ENST00000564544 AHDC1Q5TGY3 1603 aaPredicted RBP20.8■□□□□ 0.92
COX4I1-206ENST00000564544 IQGAP3Q86VI3 1631 aa20.8■□□□□ 0.92
COX4I1-206ENST00000564544 E9PCH4 1651 aa20.8■□□□□ 0.92
COX4I1-206ENST00000564544 DCCP43146 1447 aa20.78■□□□□ 0.92
COX4I1-206ENST00000564544 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.77■□□□□ 0.92
COX4I1-206ENST00000564544 BRINP3Q76B58 766 aa20.76■□□□□ 0.91
COX4I1-206ENST00000564544 LRP6O75581 1613 aa20.75■□□□□ 0.91
COX4I1-206ENST00000564544 PTPRUQ92729 1446 aa20.73■□□□□ 0.91
COX4I1-206ENST00000564544 SHPRHQ149N8 1683 aa20.73■□□□□ 0.91
COX4I1-206ENST00000564544 RXRBP28702 533 aa20.71■□□□□ 0.91
COX4I1-206ENST00000564544 ZNF326Q5BKZ1 582 aaKnown RBP20.71■□□□□ 0.91
COX4I1-206ENST00000564544 ITGAEP38570 1179 aa20.7■□□□□ 0.9
COX4I1-206ENST00000564544 TRIM52Q96A61 297 aa20.7■□□□□ 0.9
COX4I1-206ENST00000564544 SETBP1Q9Y6X0 1596 aa20.7■□□□□ 0.9
COX4I1-206ENST00000564544 SETD1AO15047 1707 aaKnown RBP20.7■□□□□ 0.9
COX4I1-206ENST00000564544 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
COX4I1-206ENST00000564544 NUTM2BA6NNL0 878 aaPredicted RBP20.68■□□□□ 0.9
COX4I1-206ENST00000564544 NUTM2EB1AL46 878 aaPredicted RBP20.68■□□□□ 0.9
COX4I1-206ENST00000564544 NUTM2AQ8IVF1 878 aaPredicted RBP20.68■□□□□ 0.9
COX4I1-206ENST00000564544 UPF1Q92900 1129 aaKnown RBP eCLIP20.68■□□□□ 0.9
COX4I1-206ENST00000564544 LRRC59Q96AG4 307 aaKnown RBP20.68■□□□□ 0.9
COX4I1-206ENST00000564544 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
COX4I1-206ENST00000564544 MST1RQ04912 1400 aa20.67■□□□□ 0.9
COX4I1-206ENST00000564544 CDK12Q9NYV4 1490 aaPredicted RBP20.67■□□□□ 0.9
COX4I1-206ENST00000564544 XRN1Q8IZH2 1706 aaKnown RBP20.67■□□□□ 0.9
COX4I1-206ENST00000564544 ADGRL3Q9HAR2 1447 aa20.64■□□□□ 0.89
COX4I1-206ENST00000564544 METP08581 1390 aa20.64■□□□□ 0.89
COX4I1-206ENST00000564544 AFF2P51816 1311 aa20.63■□□□□ 0.89
COX4I1-206ENST00000564544 NRXN3Q9Y4C0 1643 aa20.63■□□□□ 0.89
COX4I1-206ENST00000564544 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
COX4I1-206ENST00000564544 NHSL1Q5SYE7 1610 aa20.59■□□□□ 0.89
COX4I1-206ENST00000564544 PNPLA6Q8IY17 1366 aa20.58■□□□□ 0.88
COX4I1-206ENST00000564544 VGFO15240 615 aaPredicted RBP20.57■□□□□ 0.88
COX4I1-206ENST00000564544 RBM6P78332 1123 aaKnown RBP20.57■□□□□ 0.88
COX4I1-206ENST00000564544 C8orf37Q96NL8 207 aa20.57■□□□□ 0.88
COX4I1-206ENST00000564544 NEXMIFQ5QGS0 1516 aa20.56■□□□□ 0.88
COX4I1-206ENST00000564544 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
COX4I1-206ENST00000564544 PTCH1Q13635 1447 aa20.54■□□□□ 0.88
COX4I1-206ENST00000564544 C1orf167Q5SNV9 1468 aa20.54■□□□□ 0.88
COX4I1-206ENST00000564544 NGLY1Q96IV0 654 aa20.53■□□□□ 0.88
COX4I1-206ENST00000564544 CLTCL1P53675 1640 aa20.53■□□□□ 0.88
COX4I1-206ENST00000564544 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
COX4I1-206ENST00000564544 DDX17Q92841 729 aaKnown RBP20.52■□□□□ 0.88
COX4I1-206ENST00000564544 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
COX4I1-206ENST00000564544 SOS2Q07890 1332 aaPredicted RBP20.5■□□□□ 0.87
COX4I1-206ENST00000564544 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
COX4I1-206ENST00000564544 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
COX4I1-206ENST00000564544 PPARGC1BQ86YN6 1023 aaKnown RBP20.49■□□□□ 0.87
COX4I1-206ENST00000564544 RGS12O14924 1447 aa20.49■□□□□ 0.87
COX4I1-206ENST00000564544 NAIPQ13075 1403 aa20.48■□□□□ 0.87
COX4I1-206ENST00000564544 KIF1BO60333 1816 aa20.48■□□□□ 0.87
COX4I1-206ENST00000564544 ROBO2Q9HCK4 1378 aa20.47■□□□□ 0.87
COX4I1-206ENST00000564544 HFM1A2PYH4 1435 aa20.47■□□□□ 0.87
COX4I1-206ENST00000564544 LAMC1P11047 1609 aa20.46■□□□□ 0.87
COX4I1-206ENST00000564544 RRBP1Q9P2E9 1410 aaKnown RBP20.46■□□□□ 0.87
COX4I1-206ENST00000564544 ORAI2Q96SN7 254 aa20.46■□□□□ 0.87
COX4I1-206ENST00000564544 USP21Q9UK80 565 aa20.45■□□□□ 0.86
COX4I1-206ENST00000564544 TRPC5Q9UL62 973 aaPredicted RBP20.45■□□□□ 0.86
COX4I1-206ENST00000564544 FOXD1Q16676 465 aa20.44■□□□□ 0.86
COX4I1-206ENST00000564544 ATAD2Q6PL18 1390 aa20.44■□□□□ 0.86
COX4I1-206ENST00000564544 SLC4A1APQ9BWU0 796 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms