RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 UNC13BO14795 1591 aa21.89■■□□□ 1.09
CDR2-204ENST00000564542 ROBO1Q9Y6N7 1651 aa21.88■■□□□ 1.09
CDR2-204ENST00000564542 ZFYVE9O95405 1425 aa21.88■■□□□ 1.09
CDR2-204ENST00000564542 MYO5BQ9ULV0 1848 aa21.87■■□□□ 1.09
CDR2-204ENST00000564542 TMEM131LA2VDJ0 1609 aa21.86■■□□□ 1.09
CDR2-204ENST00000564542 PROSER2Q86WR7 435 aaPredicted RBP21.85■■□□□ 1.09
CDR2-204ENST00000564542 PLEKHG1Q9ULL1 1385 aa21.84■■□□□ 1.09
CDR2-204ENST00000564542 RIMS2Q9UQ26 1411 aa21.82■■□□□ 1.08
CDR2-204ENST00000564542 CHD2O14647 1828 aaKnown RBP21.82■■□□□ 1.08
CDR2-204ENST00000564542 E9PCH4 1651 aa21.82■■□□□ 1.08
CDR2-204ENST00000564542 BCANQ96GW7 911 aa21.81■■□□□ 1.08
CDR2-204ENST00000564542 MSH6P52701 1360 aa21.81■■□□□ 1.08
CDR2-204ENST00000564542 RBM33Q96EV2 1170 aaKnown RBP21.8■■□□□ 1.08
CDR2-204ENST00000564542 RGS17Q9UGC6 210 aaPredicted RBP21.8■■□□□ 1.08
CDR2-204ENST00000564542 IQGAP3Q86VI3 1631 aa21.8■■□□□ 1.08
CDR2-204ENST00000564542 ROCK1Q13464 1354 aa21.79■■□□□ 1.08
CDR2-204ENST00000564542 PPP1R15AO75807 674 aaPredicted RBP21.78■■□□□ 1.08
CDR2-204ENST00000564542 HDGFP51858 240 aaKnown RBP21.78■■□□□ 1.08
CDR2-204ENST00000564542 DIP2AQ14689 1571 aa21.76■■□□□ 1.07
CDR2-204ENST00000564542 PHLPP1O60346 1717 aa21.75■■□□□ 1.07
CDR2-204ENST00000564542 NCOA3Q9Y6Q9 1424 aa21.73■■□□□ 1.07
CDR2-204ENST00000564542 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDR2-204ENST00000564542 ADAMTS13Q76LX8 1427 aa21.72■■□□□ 1.07
CDR2-204ENST00000564542 SLAIN2Q9P270 581 aa21.72■■□□□ 1.07
CDR2-204ENST00000564542 TBX22Q9Y458 520 aa21.72■■□□□ 1.07
CDR2-204ENST00000564542 CHGAP10645 457 aaKnown RBP21.7■■□□□ 1.06
CDR2-204ENST00000564542 PIK3R4Q99570 1358 aa21.69■■□□□ 1.06
CDR2-204ENST00000564542 COL16A1Q07092 1604 aaPredicted RBP21.69■■□□□ 1.06
CDR2-204ENST00000564542 TRPM2O94759 1503 aa21.67■■□□□ 1.06
CDR2-204ENST00000564542 NUP155O75694 1391 aa21.67■■□□□ 1.06
CDR2-204ENST00000564542 JCADQ9P266 1359 aa21.67■■□□□ 1.06
CDR2-204ENST00000564542 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.66■■□□□ 1.06
CDR2-204ENST00000564542 NUTM2DQ5VT03 806 aaPredicted RBP21.65■■□□□ 1.06
CDR2-204ENST00000564542 POTEAQ6S8J7 498 aa21.65■■□□□ 1.06
CDR2-204ENST00000564542 SPHKAPQ2M3C7 1700 aa21.63■■□□□ 1.05
CDR2-204ENST00000564542 C14orf37Q86TY3 774 aa21.63■■□□□ 1.05
CDR2-204ENST00000564542 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
CDR2-204ENST00000564542 CADPS2Q86UW7 1296 aa21.61■■□□□ 1.05
CDR2-204ENST00000564542 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
CDR2-204ENST00000564542 SETBP1Q9Y6X0 1596 aa21.61■■□□□ 1.05
CDR2-204ENST00000564542 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
CDR2-204ENST00000564542 XRN1Q8IZH2 1706 aaKnown RBP21.6■■□□□ 1.05
CDR2-204ENST00000564542 ITGAEP38570 1179 aa21.59■■□□□ 1.05
CDR2-204ENST00000564542 PTPRUQ92729 1446 aa21.59■■□□□ 1.05
CDR2-204ENST00000564542 ATF3P18847 181 aa21.58■■□□□ 1.05
CDR2-204ENST00000564542 SHPRHQ149N8 1683 aa21.58■■□□□ 1.05
CDR2-204ENST00000564542 DCCP43146 1447 aa21.57■■□□□ 1.04
CDR2-204ENST00000564542 LRP6O75581 1613 aa21.57■■□□□ 1.04
CDR2-204ENST00000564542 SPATA31A6Q5VVP1 1343 aa21.56■■□□□ 1.04
CDR2-204ENST00000564542 AMOTL2Q9Y2J4 779 aa21.56■■□□□ 1.04
CDR2-204ENST00000564542 SETD1AO15047 1707 aaKnown RBP21.55■■□□□ 1.04
CDR2-204ENST00000564542 CLTCL1P53675 1640 aa21.51■■□□□ 1.03
CDR2-204ENST00000564542 ASXL1Q8IXJ9 1541 aa21.51■■□□□ 1.03
CDR2-204ENST00000564542 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
CDR2-204ENST00000564542 BRINP3Q76B58 766 aa21.5■■□□□ 1.03
CDR2-204ENST00000564542 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
CDR2-204ENST00000564542 METP08581 1390 aa21.48■■□□□ 1.03
CDR2-204ENST00000564542 NHSL1Q5SYE7 1610 aa21.48■■□□□ 1.03
CDR2-204ENST00000564542 MST1RQ04912 1400 aa21.48■■□□□ 1.03
CDR2-204ENST00000564542 MEX3CQ5U5Q3 659 aaKnown RBP21.48■■□□□ 1.03
CDR2-204ENST00000564542 PPARGC1BQ86YN6 1023 aaKnown RBP21.48■■□□□ 1.03
CDR2-204ENST00000564542 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
CDR2-204ENST00000564542 KIF1BO60333 1816 aa21.46■■□□□ 1.03
CDR2-204ENST00000564542 ZNF772Q68DY9 489 aaPredicted RBP21.46■■□□□ 1.03
CDR2-204ENST00000564542 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
CDR2-204ENST00000564542 NALCNQ8IZF0 1738 aa21.45■■□□□ 1.02
CDR2-204ENST00000564542 NAIPQ13075 1403 aa21.44■■□□□ 1.02
CDR2-204ENST00000564542 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
CDR2-204ENST00000564542 PTCH1Q13635 1447 aa21.38■■□□□ 1.01
CDR2-204ENST00000564542 NUTM2BA6NNL0 878 aaPredicted RBP21.36■■□□□ 1.01
CDR2-204ENST00000564542 NUTM2EB1AL46 878 aaPredicted RBP21.36■■□□□ 1.01
CDR2-204ENST00000564542 NUTM2AQ8IVF1 878 aaPredicted RBP21.36■■□□□ 1.01
CDR2-204ENST00000564542 CDK12Q9NYV4 1490 aaPredicted RBP21.36■■□□□ 1.01
CDR2-204ENST00000564542 HFM1A2PYH4 1435 aa21.36■■□□□ 1.01
CDR2-204ENST00000564542 PRAG1Q86YV5 1406 aa21.36■■□□□ 1.01
CDR2-204ENST00000564542 LAMC1P11047 1609 aa21.36■■□□□ 1.01
CDR2-204ENST00000564542 TRIM52Q96A61 297 aa21.35■■□□□ 1.01
CDR2-204ENST00000564542 LRRC59Q96AG4 307 aaKnown RBP21.35■■□□□ 1.01
CDR2-204ENST00000564542 PNPLA6Q8IY17 1366 aa21.34■■□□□ 1.01
CDR2-204ENST00000564542 C1orf167Q5SNV9 1468 aa21.33■■□□□ 1.01
CDR2-204ENST00000564542 RXRBP28702 533 aa21.33■■□□□ 1.01
CDR2-204ENST00000564542 PPLO60437 1756 aa21.33■■□□□ 1
CDR2-204ENST00000564542 AFF2P51816 1311 aa21.32■■□□□ 1
CDR2-204ENST00000564542 VGFO15240 615 aaPredicted RBP21.32■■□□□ 1
CDR2-204ENST00000564542 DDX17Q92841 729 aaKnown RBP21.31■■□□□ 1
CDR2-204ENST00000564542 UPF1Q92900 1129 aaKnown RBP eCLIP21.31■■□□□ 1
CDR2-204ENST00000564542 ROBO2Q9HCK4 1378 aa21.31■■□□□ 1
CDR2-204ENST00000564542 RPGRIP1LQ68CZ1 1315 aa21.29■■□□□ 1
CDR2-204ENST00000564542 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
CDR2-204ENST00000564542 C8orf37Q96NL8 207 aa21.26■□□□□ 0.99
CDR2-204ENST00000564542 CDC42BPGQ6DT37 1551 aa21.24■□□□□ 0.99
CDR2-204ENST00000564542 SOS2Q07890 1332 aaPredicted RBP21.24■□□□□ 0.99
CDR2-204ENST00000564542 RGS12O14924 1447 aa21.23■□□□□ 0.99
CDR2-204ENST00000564542 ORAI2Q96SN7 254 aa21.22■□□□□ 0.99
CDR2-204ENST00000564542 COL22A1Q8NFW1 1626 aaPredicted RBP21.22■□□□□ 0.99
CDR2-204ENST00000564542 RBM6P78332 1123 aaKnown RBP21.21■□□□□ 0.99
CDR2-204ENST00000564542 QTRT2Q9H974 415 aaKnown RBP21.2■□□□□ 0.98
CDR2-204ENST00000564542 IFT172Q9UG01 1749 aa21.19■□□□□ 0.98
CDR2-204ENST00000564542 ADAMTS2O95450 1211 aa21.19■□□□□ 0.98
CDR2-204ENST00000564542 CCDC144AA2RUR9 1427 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms