RNA–Protein interactions for RNA: ENST00000564457.1

LYRM1-206, Transcript of LYR motif containing 1, humanhuman

TSL 3

Gene LYRM1, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-206ENST00000564457 PTPN23Q9H3S7 1636 aa25.71■■□□□ 1.71
LYRM1-206ENST00000564457 TBX22Q9Y458 520 aa25.7■■□□□ 1.7
LYRM1-206ENST00000564457 FGD6Q6ZV73 1430 aa25.69■■□□□ 1.7
LYRM1-206ENST00000564457 PLEKHG1Q9ULL1 1385 aa25.68■■□□□ 1.7
LYRM1-206ENST00000564457 CROCC2H7BZ55 1655 aa25.68■■□□□ 1.7
LYRM1-206ENST00000564457 PPP1R15AO75807 674 aaPredicted RBP25.67■■□□□ 1.7
LYRM1-206ENST00000564457 NCOA3Q9Y6Q9 1424 aa25.67■■□□□ 1.7
LYRM1-206ENST00000564457 ADGRB3O60242 1522 aa25.67■■□□□ 1.7
LYRM1-206ENST00000564457 NWD1Q149M9 1564 aa25.66■■□□□ 1.7
LYRM1-206ENST00000564457 SPATA31A6Q5VVP1 1343 aa25.64■■□□□ 1.7
LYRM1-206ENST00000564457 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.64■■□□□ 1.7
LYRM1-206ENST00000564457 RPRD2Q5VT52 1461 aaKnown RBP25.64■■□□□ 1.69
LYRM1-206ENST00000564457 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
LYRM1-206ENST00000564457 ZNF772Q68DY9 489 aaPredicted RBP25.62■■□□□ 1.69
LYRM1-206ENST00000564457 C19orf44Q9H6X5 657 aa25.62■■□□□ 1.69
LYRM1-206ENST00000564457 C14orf37Q86TY3 774 aa25.61■■□□□ 1.69
LYRM1-206ENST00000564457 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
LYRM1-206ENST00000564457 RIMS2Q9UQ26 1411 aa25.61■■□□□ 1.69
LYRM1-206ENST00000564457 ANKRD50Q9ULJ7 1429 aa25.58■■□□□ 1.69
LYRM1-206ENST00000564457 ADGRL2O95490 1459 aa25.58■■□□□ 1.69
LYRM1-206ENST00000564457 PHLPP1O60346 1717 aa25.57■■□□□ 1.68
LYRM1-206ENST00000564457 ATF3P18847 181 aa25.57■■□□□ 1.68
LYRM1-206ENST00000564457 MEX3CQ5U5Q3 659 aaKnown RBP25.57■■□□□ 1.68
LYRM1-206ENST00000564457 CHGAP10645 457 aaKnown RBP25.55■■□□□ 1.68
LYRM1-206ENST00000564457 UPF1Q92900 1129 aaKnown RBP eCLIP25.55■■□□□ 1.68
LYRM1-206ENST00000564457 PIK3R4Q99570 1358 aa25.54■■□□□ 1.68
LYRM1-206ENST00000564457 FAM50AQ14320 339 aaKnown RBP25.53■■□□□ 1.68
LYRM1-206ENST00000564457 CHD2O14647 1828 aaKnown RBP25.53■■□□□ 1.68
LYRM1-206ENST00000564457 COL16A1Q07092 1604 aaPredicted RBP25.51■■□□□ 1.67
LYRM1-206ENST00000564457 RXRBP28702 533 aa25.5■■□□□ 1.67
LYRM1-206ENST00000564457 NUTM2DQ5VT03 806 aaPredicted RBP25.5■■□□□ 1.67
LYRM1-206ENST00000564457 ADAMTS13Q76LX8 1427 aa25.5■■□□□ 1.67
LYRM1-206ENST00000564457 LRP6O75581 1613 aa25.49■■□□□ 1.67
LYRM1-206ENST00000564457 TRIM52Q96A61 297 aa25.49■■□□□ 1.67
LYRM1-206ENST00000564457 AMOTL2Q9Y2J4 779 aa25.49■■□□□ 1.67
LYRM1-206ENST00000564457 TMEM131LA2VDJ0 1609 aa25.48■■□□□ 1.67
LYRM1-206ENST00000564457 BRINP3Q76B58 766 aa25.47■■□□□ 1.67
LYRM1-206ENST00000564457 AHDC1Q5TGY3 1603 aaPredicted RBP25.43■■□□□ 1.66
LYRM1-206ENST00000564457 SETD1AO15047 1707 aaKnown RBP25.43■■□□□ 1.66
LYRM1-206ENST00000564457 NUTM2BA6NNL0 878 aaPredicted RBP25.42■■□□□ 1.66
LYRM1-206ENST00000564457 NUTM2EB1AL46 878 aaPredicted RBP25.42■■□□□ 1.66
LYRM1-206ENST00000564457 NUTM2AQ8IVF1 878 aaPredicted RBP25.42■■□□□ 1.66
LYRM1-206ENST00000564457 DIP2AQ14689 1571 aa25.39■■□□□ 1.66
LYRM1-206ENST00000564457 LRRC59Q96AG4 307 aaKnown RBP25.39■■□□□ 1.66
LYRM1-206ENST00000564457 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.39■■□□□ 1.65
LYRM1-206ENST00000564457 GCC2Q8IWJ2 1684 aa25.39■■□□□ 1.65
LYRM1-206ENST00000564457 MYO5BQ9ULV0 1848 aa25.37■■□□□ 1.65
LYRM1-206ENST00000564457 DCCP43146 1447 aa25.37■■□□□ 1.65
LYRM1-206ENST00000564457 PTPRUQ92729 1446 aa25.37■■□□□ 1.65
LYRM1-206ENST00000564457 CDK12Q9NYV4 1490 aaPredicted RBP25.36■■□□□ 1.65
LYRM1-206ENST00000564457 SHPRHQ149N8 1683 aa25.36■■□□□ 1.65
LYRM1-206ENST00000564457 SETD5Q9C0A6 1442 aa25.35■■□□□ 1.65
LYRM1-206ENST00000564457 AFF2P51816 1311 aa25.35■■□□□ 1.65
LYRM1-206ENST00000564457 TRPM2O94759 1503 aa25.34■■□□□ 1.65
LYRM1-206ENST00000564457 ROCK1Q13464 1354 aa25.33■■□□□ 1.65
LYRM1-206ENST00000564457 NUP155O75694 1391 aa25.32■■□□□ 1.64
LYRM1-206ENST00000564457 QTRT2Q9H974 415 aaKnown RBP25.31■■□□□ 1.64
LYRM1-206ENST00000564457 UNC13BO14795 1591 aa25.31■■□□□ 1.64
LYRM1-206ENST00000564457 RBM6P78332 1123 aaKnown RBP25.3■■□□□ 1.64
LYRM1-206ENST00000564457 MST1RQ04912 1400 aa25.29■■□□□ 1.64
LYRM1-206ENST00000564457 E9PCH4 1651 aa25.28■■□□□ 1.64
LYRM1-206ENST00000564457 ASXL1Q8IXJ9 1541 aa25.27■■□□□ 1.64
LYRM1-206ENST00000564457 C8orf37Q96NL8 207 aa25.27■■□□□ 1.64
LYRM1-206ENST00000564457 ZNF326Q5BKZ1 582 aaKnown RBP25.26■■□□□ 1.63
LYRM1-206ENST00000564457 METP08581 1390 aa25.25■■□□□ 1.63
LYRM1-206ENST00000564457 IQGAP3Q86VI3 1631 aa25.23■■□□□ 1.63
LYRM1-206ENST00000564457 DDX17Q92841 729 aaKnown RBP25.22■■□□□ 1.63
LYRM1-206ENST00000564457 NGLY1Q96IV0 654 aa25.22■■□□□ 1.63
LYRM1-206ENST00000564457 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
LYRM1-206ENST00000564457 SETBP1Q9Y6X0 1596 aa25.2■■□□□ 1.62
LYRM1-206ENST00000564457 ADGRL3Q9HAR2 1447 aa25.18■■□□□ 1.62
LYRM1-206ENST00000564457 RGS12O14924 1447 aa25.17■■□□□ 1.62
LYRM1-206ENST00000564457 XRN1Q8IZH2 1706 aaKnown RBP25.17■■□□□ 1.62
LYRM1-206ENST00000564457 ADAMTS2O95450 1211 aa25.16■■□□□ 1.62
LYRM1-206ENST00000564457 ITGAEP38570 1179 aa25.16■■□□□ 1.62
LYRM1-206ENST00000564457 SRCAPQ6ZRS2 3230 aa25.15■■□□□ 1.62
LYRM1-206ENST00000564457 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
LYRM1-206ENST00000564457 NRXN3Q9Y4C0 1643 aa25.15■■□□□ 1.62
LYRM1-206ENST00000564457 SOS2Q07890 1332 aaPredicted RBP25.12■■□□□ 1.61
LYRM1-206ENST00000564457 USP21Q9UK80 565 aa25.12■■□□□ 1.61
LYRM1-206ENST00000564457 C1orf167Q5SNV9 1468 aa25.11■■□□□ 1.61
LYRM1-206ENST00000564457 TRPC5Q9UL62 973 aaPredicted RBP25.11■■□□□ 1.61
LYRM1-206ENST00000564457 FOXD1Q16676 465 aa25.1■■□□□ 1.61
LYRM1-206ENST00000564457 FNBP4Q8N3X1 1017 aaPredicted RBP25.1■■□□□ 1.61
LYRM1-206ENST00000564457 ORAI2Q96SN7 254 aa25.1■■□□□ 1.61
LYRM1-206ENST00000564457 ATAD2Q6PL18 1390 aa25.09■■□□□ 1.61
LYRM1-206ENST00000564457 VGFO15240 615 aaPredicted RBP25.09■■□□□ 1.61
LYRM1-206ENST00000564457 PTCH1Q13635 1447 aa25.03■■□□□ 1.6
LYRM1-206ENST00000564457 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
LYRM1-206ENST00000564457 ROBO2Q9HCK4 1378 aa25.03■■□□□ 1.6
LYRM1-206ENST00000564457 ZRANB1Q9UGI0 708 aa25.02■■□□□ 1.6
LYRM1-206ENST00000564457 NEXMIFQ5QGS0 1516 aa25.02■■□□□ 1.6
LYRM1-206ENST00000564457 RPGRIP1LQ68CZ1 1315 aa25.01■■□□□ 1.59
LYRM1-206ENST00000564457 SPHKAPQ2M3C7 1700 aa25■■□□□ 1.59
LYRM1-206ENST00000564457 LAMC1P11047 1609 aa24.99■■□□□ 1.59
LYRM1-206ENST00000564457 NALCNQ8IZF0 1738 aa24.98■■□□□ 1.59
LYRM1-206ENST00000564457 ATRNO75882 1429 aa24.97■■□□□ 1.59
LYRM1-206ENST00000564457 PRAG1Q86YV5 1406 aa24.96■■□□□ 1.59
LYRM1-206ENST00000564457 NPHP3Q7Z494 1330 aa24.96■■□□□ 1.59
LYRM1-206ENST00000564457 ESCO1Q5FWF5 840 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms