RNA–Protein interactions for RNA: ENST00000564396.5

KLHDC4-212, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-212ENST00000564396 NKTRP30414 1462 aaKnown RBP22.4■■□□□ 1.18
KLHDC4-212ENST00000564396 TMEM94Q12767 1356 aa22.38■■□□□ 1.17
KLHDC4-212ENST00000564396 ROBO1Q9Y6N7 1651 aa22.38■■□□□ 1.17
KLHDC4-212ENST00000564396 KCNA6P17658 529 aa22.37■■□□□ 1.17
KLHDC4-212ENST00000564396 FAM135BQ49AJ0 1406 aa22.37■■□□□ 1.17
KLHDC4-212ENST00000564396 SLC26A8Q96RN1 970 aa22.36■■□□□ 1.17
KLHDC4-212ENST00000564396 ROCK1Q13464 1354 aa22.36■■□□□ 1.17
KLHDC4-212ENST00000564396 PLEKHG1Q9ULL1 1385 aa22.34■■□□□ 1.17
KLHDC4-212ENST00000564396 RIMS2Q9UQ26 1411 aa22.33■■□□□ 1.17
KLHDC4-212ENST00000564396 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
KLHDC4-212ENST00000564396 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
KLHDC4-212ENST00000564396 DIP2AQ14689 1571 aa22.28■■□□□ 1.16
KLHDC4-212ENST00000564396 ADAMTS13Q76LX8 1427 aa22.27■■□□□ 1.16
KLHDC4-212ENST00000564396 PROSER2Q86WR7 435 aaPredicted RBP22.27■■□□□ 1.16
KLHDC4-212ENST00000564396 PHF23Q9BUL5 403 aaPredicted RBP22.26■■□□□ 1.15
KLHDC4-212ENST00000564396 RGS17Q9UGC6 210 aaPredicted RBP22.26■■□□□ 1.15
KLHDC4-212ENST00000564396 SPHKAPQ2M3C7 1700 aa22.26■■□□□ 1.15
KLHDC4-212ENST00000564396 PHLPP1O60346 1717 aa22.24■■□□□ 1.15
KLHDC4-212ENST00000564396 NRXN3Q9Y4C0 1643 aa22.23■■□□□ 1.15
KLHDC4-212ENST00000564396 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.21■■□□□ 1.15
KLHDC4-212ENST00000564396 MSH6P52701 1360 aa22.21■■□□□ 1.15
KLHDC4-212ENST00000564396 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.15
KLHDC4-212ENST00000564396 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
KLHDC4-212ENST00000564396 NCOA3Q9Y6Q9 1424 aa22.2■■□□□ 1.14
KLHDC4-212ENST00000564396 NUP155O75694 1391 aa22.19■■□□□ 1.14
KLHDC4-212ENST00000564396 PPP1R15AO75807 674 aaPredicted RBP22.18■■□□□ 1.14
KLHDC4-212ENST00000564396 BCANQ96GW7 911 aa22.18■■□□□ 1.14
KLHDC4-212ENST00000564396 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
KLHDC4-212ENST00000564396 TRPM2O94759 1503 aa22.17■■□□□ 1.14
KLHDC4-212ENST00000564396 HDGFP51858 240 aaKnown RBP22.17■■□□□ 1.14
KLHDC4-212ENST00000564396 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.17■■□□□ 1.14
KLHDC4-212ENST00000564396 PIK3R4Q99570 1358 aa22.16■■□□□ 1.14
KLHDC4-212ENST00000564396 SETBP1Q9Y6X0 1596 aa22.16■■□□□ 1.14
KLHDC4-212ENST00000564396 PTPRUQ92729 1446 aa22.15■■□□□ 1.14
KLHDC4-212ENST00000564396 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
KLHDC4-212ENST00000564396 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.13
KLHDC4-212ENST00000564396 CLTCL1P53675 1640 aa22.13■■□□□ 1.13
KLHDC4-212ENST00000564396 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
KLHDC4-212ENST00000564396 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
KLHDC4-212ENST00000564396 ITGAEP38570 1179 aa22.11■■□□□ 1.13
KLHDC4-212ENST00000564396 PPARGC1BQ86YN6 1023 aaKnown RBP22.1■■□□□ 1.13
KLHDC4-212ENST00000564396 RRBP1Q9P2E9 1410 aaKnown RBP22.1■■□□□ 1.13
KLHDC4-212ENST00000564396 SHPRHQ149N8 1683 aa22.09■■□□□ 1.13
KLHDC4-212ENST00000564396 NEXMIFQ5QGS0 1516 aa22.09■■□□□ 1.13
KLHDC4-212ENST00000564396 POTEAQ6S8J7 498 aa22.08■■□□□ 1.13
KLHDC4-212ENST00000564396 JCADQ9P266 1359 aa22.07■■□□□ 1.12
KLHDC4-212ENST00000564396 KIF1BO60333 1816 aa22.06■■□□□ 1.12
KLHDC4-212ENST00000564396 SETD1AO15047 1707 aaKnown RBP22.06■■□□□ 1.12
KLHDC4-212ENST00000564396 LRP6O75581 1613 aa22.06■■□□□ 1.12
KLHDC4-212ENST00000564396 NAIPQ13075 1403 aa22.06■■□□□ 1.12
KLHDC4-212ENST00000564396 DCCP43146 1447 aa22.05■■□□□ 1.12
KLHDC4-212ENST00000564396 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
KLHDC4-212ENST00000564396 NALCNQ8IZF0 1738 aa22.03■■□□□ 1.12
KLHDC4-212ENST00000564396 NHSL1Q5SYE7 1610 aa22.03■■□□□ 1.12
KLHDC4-212ENST00000564396 AMOTL2Q9Y2J4 779 aa22.03■■□□□ 1.12
KLHDC4-212ENST00000564396 METP08581 1390 aa22.01■■□□□ 1.11
KLHDC4-212ENST00000564396 CADPS2Q86UW7 1296 aa22.01■■□□□ 1.11
KLHDC4-212ENST00000564396 ASXL1Q8IXJ9 1541 aa21.99■■□□□ 1.11
KLHDC4-212ENST00000564396 MST1RQ04912 1400 aa21.98■■□□□ 1.11
KLHDC4-212ENST00000564396 C14orf37Q86TY3 774 aa21.98■■□□□ 1.11
KLHDC4-212ENST00000564396 ATF3P18847 181 aa21.96■■□□□ 1.11
KLHDC4-212ENST00000564396 BRINP3Q76B58 766 aa21.96■■□□□ 1.11
KLHDC4-212ENST00000564396 SPATA31A6Q5VVP1 1343 aa21.96■■□□□ 1.11
KLHDC4-212ENST00000564396 PPLO60437 1756 aa21.95■■□□□ 1.1
KLHDC4-212ENST00000564396 HFM1A2PYH4 1435 aa21.95■■□□□ 1.1
KLHDC4-212ENST00000564396 ADGRL3Q9HAR2 1447 aa21.94■■□□□ 1.1
KLHDC4-212ENST00000564396 ZNF326Q5BKZ1 582 aaKnown RBP21.93■■□□□ 1.1
KLHDC4-212ENST00000564396 LAMC1P11047 1609 aa21.92■■□□□ 1.1
KLHDC4-212ENST00000564396 PRAG1Q86YV5 1406 aa21.91■■□□□ 1.1
KLHDC4-212ENST00000564396 SETD5Q9C0A6 1442 aa21.91■■□□□ 1.1
KLHDC4-212ENST00000564396 PTCH1Q13635 1447 aa21.89■■□□□ 1.09
KLHDC4-212ENST00000564396 IFT172Q9UG01 1749 aa21.86■■□□□ 1.09
KLHDC4-212ENST00000564396 ROBO2Q9HCK4 1378 aa21.83■■□□□ 1.08
KLHDC4-212ENST00000564396 C1orf167Q5SNV9 1468 aa21.83■■□□□ 1.08
KLHDC4-212ENST00000564396 PNPLA6Q8IY17 1366 aa21.8■■□□□ 1.08
KLHDC4-212ENST00000564396 ZNF772Q68DY9 489 aaPredicted RBP21.8■■□□□ 1.08
KLHDC4-212ENST00000564396 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
KLHDC4-212ENST00000564396 MEX3CQ5U5Q3 659 aaKnown RBP21.79■■□□□ 1.08
KLHDC4-212ENST00000564396 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
KLHDC4-212ENST00000564396 RPGRIP1LQ68CZ1 1315 aa21.79■■□□□ 1.08
KLHDC4-212ENST00000564396 TRIM52Q96A61 297 aa21.78■■□□□ 1.08
KLHDC4-212ENST00000564396 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
KLHDC4-212ENST00000564396 CDK12Q9NYV4 1490 aaPredicted RBP21.77■■□□□ 1.07
KLHDC4-212ENST00000564396 CDC42BPGQ6DT37 1551 aa21.76■■□□□ 1.07
KLHDC4-212ENST00000564396 KNDC1Q76NI1 1749 aa21.75■■□□□ 1.07
KLHDC4-212ENST00000564396 LRRC59Q96AG4 307 aaKnown RBP21.75■■□□□ 1.07
KLHDC4-212ENST00000564396 COL22A1Q8NFW1 1626 aaPredicted RBP21.75■■□□□ 1.07
KLHDC4-212ENST00000564396 SPATA31E1Q6ZUB1 1445 aa21.74■■□□□ 1.07
KLHDC4-212ENST00000564396 NUTM2BA6NNL0 878 aaPredicted RBP21.74■■□□□ 1.07
KLHDC4-212ENST00000564396 NUTM2EB1AL46 878 aaPredicted RBP21.74■■□□□ 1.07
KLHDC4-212ENST00000564396 NUTM2AQ8IVF1 878 aaPredicted RBP21.74■■□□□ 1.07
KLHDC4-212ENST00000564396 AFF2P51816 1311 aa21.73■■□□□ 1.07
KLHDC4-212ENST00000564396 FOXD1Q16676 465 aa21.72■■□□□ 1.07
KLHDC4-212ENST00000564396 SOS2Q07890 1332 aaPredicted RBP21.72■■□□□ 1.07
KLHDC4-212ENST00000564396 TECPR2O15040 1411 aa21.71■■□□□ 1.07
KLHDC4-212ENST00000564396 ORAI2Q96SN7 254 aa21.7■■□□□ 1.06
KLHDC4-212ENST00000564396 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.06
KLHDC4-212ENST00000564396 RXRBP28702 533 aa21.68■■□□□ 1.06
KLHDC4-212ENST00000564396 ADGRF5Q8IZF2 1346 aa21.68■■□□□ 1.06
KLHDC4-212ENST00000564396 CCDC144AA2RUR9 1427 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms