RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ABCC3O15438 1527 aa22.45■■□□□ 1.18
CCNF-204ENST00000564333 TMC1Q8TDI8 760 aa22.45■■□□□ 1.18
CCNF-204ENST00000564333 SYNMO15061 1565 aa22.43■■□□□ 1.18
CCNF-204ENST00000564333 NPATQ14207 1427 aa22.43■■□□□ 1.18
CCNF-204ENST00000564333 GLI2P10070 1586 aa22.42■■□□□ 1.18
CCNF-204ENST00000564333 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
CCNF-204ENST00000564333 EIF3AQ14152 1382 aaKnown RBP22.42■■□□□ 1.18
CCNF-204ENST00000564333 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
CCNF-204ENST00000564333 MYOM1P52179 1685 aa22.41■■□□□ 1.18
CCNF-204ENST00000564333 NRXN1Q9ULB1 1477 aa22.41■■□□□ 1.18
CCNF-204ENST00000564333 PPLO60437 1756 aa22.41■■□□□ 1.18
CCNF-204ENST00000564333 PER1O15534 1290 aaPredicted RBP22.41■■□□□ 1.18
CCNF-204ENST00000564333 ZC3H13Q5T200 1668 aaKnown RBP22.4■■□□□ 1.18
CCNF-204ENST00000564333 KDM5AP29375 1690 aaKnown RBP22.4■■□□□ 1.18
CCNF-204ENST00000564333 WASHC2CQ9Y4E1 1318 aa22.39■■□□□ 1.17
CCNF-204ENST00000564333 CFAP65Q6ZU64 1925 aaKnown RBP22.38■■□□□ 1.17
CCNF-204ENST00000564333 SIGLEC1Q9BZZ2 1709 aa22.38■■□□□ 1.17
CCNF-204ENST00000564333 NLRP13Q86W25 1043 aa22.37■■□□□ 1.17
CCNF-204ENST00000564333 PANK3Q9H999 370 aa22.37■■□□□ 1.17
CCNF-204ENST00000564333 MYO3AQ8NEV4 1616 aa22.37■■□□□ 1.17
CCNF-204ENST00000564333 SMG6Q86US8 1419 aaKnown RBP22.37■■□□□ 1.17
CCNF-204ENST00000564333 RAPGEF3O95398 923 aa22.36■■□□□ 1.17
CCNF-204ENST00000564333 GGT6Q6P531 493 aa22.36■■□□□ 1.17
CCNF-204ENST00000564333 ERICH6BQ5W0A0 696 aa22.35■■□□□ 1.17
CCNF-204ENST00000564333 ADGRF5Q8IZF2 1346 aa22.35■■□□□ 1.17
CCNF-204ENST00000564333 SETBP1Q9Y6X0 1596 aa22.34■■□□□ 1.17
CCNF-204ENST00000564333 PIK3C2BO00750 1634 aa22.34■■□□□ 1.17
CCNF-204ENST00000564333 NOS1P29475 1434 aa22.34■■□□□ 1.17
CCNF-204ENST00000564333 CDCA8Q53HL2 280 aa22.33■■□□□ 1.16
CCNF-204ENST00000564333 DIP2BQ9P265 1576 aa22.32■■□□□ 1.16
CCNF-204ENST00000564333 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
CCNF-204ENST00000564333 ANP32EQ9BTT0 268 aa22.32■■□□□ 1.16
CCNF-204ENST00000564333 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
CCNF-204ENST00000564333 CFAP70Q5T0N1 1121 aa22.31■■□□□ 1.16
CCNF-204ENST00000564333 ZMYM4Q5VZL5 1548 aa22.3■■□□□ 1.16
CCNF-204ENST00000564333 YEATS2Q9ULM3 1422 aa22.29■■□□□ 1.16
CCNF-204ENST00000564333 NUDCQ9Y266 331 aa22.29■■□□□ 1.16
CCNF-204ENST00000564333 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
CCNF-204ENST00000564333 ERVK-7P63135 1459 aa22.27■■□□□ 1.16
CCNF-204ENST00000564333 CHGAP10645 457 aaKnown RBP22.27■■□□□ 1.16
CCNF-204ENST00000564333 ASXL1Q8IXJ9 1541 aa22.26■■□□□ 1.15
CCNF-204ENST00000564333 ARHGAP31Q2M1Z3 1444 aa22.25■■□□□ 1.15
CCNF-204ENST00000564333 QRICH2Q9H0J4 1663 aa22.24■■□□□ 1.15
CCNF-204ENST00000564333 ADGRB1O14514 1584 aa22.24■■□□□ 1.15
CCNF-204ENST00000564333 TSPOAP1O95153 1857 aa22.23■■□□□ 1.15
CCNF-204ENST00000564333 PREX1Q8TCU6 1659 aa22.23■■□□□ 1.15
CCNF-204ENST00000564333 NEXMIFQ5QGS0 1516 aa22.23■■□□□ 1.15
CCNF-204ENST00000564333 INSRP06213 1382 aa22.22■■□□□ 1.15
CCNF-204ENST00000564333 SBNO2Q9Y2G9 1366 aa22.22■■□□□ 1.15
CCNF-204ENST00000564333 BLMP54132 1417 aaPredicted RBP22.22■■□□□ 1.15
CCNF-204ENST00000564333 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
CCNF-204ENST00000564333 KNSTRNQ9Y448 316 aa22.21■■□□□ 1.15
CCNF-204ENST00000564333 RPGRIP1LQ68CZ1 1315 aa22.21■■□□□ 1.15
CCNF-204ENST00000564333 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
CCNF-204ENST00000564333 RBM19Q9Y4C8 960 aaKnown RBP22.2■■□□□ 1.14
CCNF-204ENST00000564333 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
CCNF-204ENST00000564333 PPP4R2Q9NY27 417 aa22.18■■□□□ 1.14
CCNF-204ENST00000564333 MYO5BQ9ULV0 1848 aa22.17■■□□□ 1.14
CCNF-204ENST00000564333 NPC1L1Q9UHC9 1359 aa22.17■■□□□ 1.14
CCNF-204ENST00000564333 FAM69CQ0P6D2 419 aa22.16■■□□□ 1.14
CCNF-204ENST00000564333 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
CCNF-204ENST00000564333 ARHGEF28Q8N1W1 1705 aaKnown RBP22.16■■□□□ 1.14
CCNF-204ENST00000564333 C14orf93Q9H972 538 aaKnown RBP22.16■■□□□ 1.14
CCNF-204ENST00000564333 CENPJQ9HC77 1338 aaPredicted RBP22.15■■□□□ 1.14
CCNF-204ENST00000564333 KIF13AQ9H1H9 1805 aa22.15■■□□□ 1.14
CCNF-204ENST00000564333 RNF123Q5XPI4 1314 aa22.14■■□□□ 1.14
CCNF-204ENST00000564333 TMEM131LA2VDJ0 1609 aa22.12■■□□□ 1.13
CCNF-204ENST00000564333 PPP2R1AP30153 589 aa22.12■■□□□ 1.13
CCNF-204ENST00000564333 TRHP20396 242 aaPredicted RBP22.12■■□□□ 1.13
CCNF-204ENST00000564333 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
CCNF-204ENST00000564333 AGLP35573 1532 aa22.08■■□□□ 1.13
CCNF-204ENST00000564333 PDE3BQ13370 1112 aa22.08■■□□□ 1.13
CCNF-204ENST00000564333 VGFO15240 615 aaPredicted RBP22.07■■□□□ 1.12
CCNF-204ENST00000564333 ZFYVE9O95405 1425 aa22.07■■□□□ 1.12
CCNF-204ENST00000564333 SLC52A1Q9NWF4 448 aa22.07■■□□□ 1.12
CCNF-204ENST00000564333 CLTCQ00610 1675 aaKnown RBP22.06■■□□□ 1.12
CCNF-204ENST00000564333 IDI1Q13907 227 aa22.06■■□□□ 1.12
CCNF-204ENST00000564333 SALL2Q9Y467 1007 aaPredicted RBP22.06■■□□□ 1.12
CCNF-204ENST00000564333 TMEM132EQ6IEE7 984 aa22.05■■□□□ 1.12
CCNF-204ENST00000564333 FANCIQ9NVI1 1328 aa22.05■■□□□ 1.12
CCNF-204ENST00000564333 USP32Q8NFA0 1604 aa22.04■■□□□ 1.12
CCNF-204ENST00000564333 NUTM2DQ5VT03 806 aaPredicted RBP22.04■■□□□ 1.12
CCNF-204ENST00000564333 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
CCNF-204ENST00000564333 TULP4Q9NRJ4 1543 aa22.03■■□□□ 1.12
CCNF-204ENST00000564333 WDR43Q15061 677 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCNF-204ENST00000564333 B4GALNT3Q6L9W6 998 aa22.02■■□□□ 1.11
CCNF-204ENST00000564333 CARD14Q9BXL6 1004 aa22.01■■□□□ 1.11
CCNF-204ENST00000564333 ADAMTS8Q9UP79 889 aa22■■□□□ 1.11
CCNF-204ENST00000564333 NSD3Q9BZ95 1437 aa21.99■■□□□ 1.11
CCNF-204ENST00000564333 RCAN3Q9UKA8 241 aa21.97■■□□□ 1.11
CCNF-204ENST00000564333 SPATA31D1Q6ZQQ2 1576 aa21.97■■□□□ 1.11
CCNF-204ENST00000564333 RRP1P56182 461 aaKnown RBP21.96■■□□□ 1.11
CCNF-204ENST00000564333 CDCA7LQ96GN5 454 aa21.96■■□□□ 1.11
CCNF-204ENST00000564333 EVC2Q86UK5 1308 aa21.94■■□□□ 1.1
CCNF-204ENST00000564333 FBXO31Q5XUX0 539 aaPredicted RBP21.94■■□□□ 1.1
CCNF-204ENST00000564333 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
CCNF-204ENST00000564333 PTPRMP28827 1452 aa21.92■■□□□ 1.1
CCNF-204ENST00000564333 PUS7Q96PZ0 661 aaKnown RBP21.92■■□□□ 1.1
CCNF-204ENST00000564333 SHPRHQ149N8 1683 aa21.92■■□□□ 1.1
CCNF-204ENST00000564333 ALKQ9UM73 1620 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms