RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TMEM131LA2VDJ0 1609 aa36.64■■■■□ 3.46
NME3-206ENST00000564252 KCNA6P17658 529 aa36.63■■■■□ 3.45
NME3-206ENST00000564252 ITGAEP38570 1179 aa36.61■■■■□ 3.45
NME3-206ENST00000564252 NWD1Q149M9 1564 aa36.59■■■■□ 3.45
NME3-206ENST00000564252 TMEM94Q12767 1356 aa36.59■■■■□ 3.45
NME3-206ENST00000564252 RIMS2Q9UQ26 1411 aa36.59■■■■□ 3.45
NME3-206ENST00000564252 PLEKHG1Q9ULL1 1385 aa36.56■■■■□ 3.44
NME3-206ENST00000564252 NUP155O75694 1391 aa36.55■■■■□ 3.44
NME3-206ENST00000564252 SENP3Q9H4L4 574 aaPredicted RBP36.55■■■■□ 3.44
NME3-206ENST00000564252 NKTRP30414 1462 aaKnown RBP36.55■■■■□ 3.44
NME3-206ENST00000564252 BCANQ96GW7 911 aa36.53■■■■□ 3.44
NME3-206ENST00000564252 PROSER2Q86WR7 435 aaPredicted RBP36.51■■■■□ 3.44
NME3-206ENST00000564252 PPP1R15AO75807 674 aaPredicted RBP36.5■■■■□ 3.43
NME3-206ENST00000564252 HDGFP51858 240 aaKnown RBP36.5■■■■□ 3.43
NME3-206ENST00000564252 CHGAP10645 457 aaKnown RBP36.48■■■■□ 3.43
NME3-206ENST00000564252 RBM33Q96EV2 1170 aaKnown RBP36.47■■■■□ 3.43
NME3-206ENST00000564252 FAM135BQ49AJ0 1406 aa36.47■■■■□ 3.43
NME3-206ENST00000564252 CHD2O14647 1828 aaKnown RBP36.47■■■■□ 3.43
NME3-206ENST00000564252 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.45■■■■□ 3.43
NME3-206ENST00000564252 RRBP1Q9P2E9 1410 aaKnown RBP36.43■■■■□ 3.42
NME3-206ENST00000564252 TBX22Q9Y458 520 aa36.4■■■■□ 3.42
NME3-206ENST00000564252 ADAMTS13Q76LX8 1427 aa36.39■■■■□ 3.42
NME3-206ENST00000564252 NUTM2DQ5VT03 806 aaPredicted RBP36.38■■■■□ 3.41
NME3-206ENST00000564252 ROBO1Q9Y6N7 1651 aa36.37■■■■□ 3.41
NME3-206ENST00000564252 SPHKAPQ2M3C7 1700 aa36.37■■■■□ 3.41
NME3-206ENST00000564252 DIP2AQ14689 1571 aa36.36■■■■□ 3.41
NME3-206ENST00000564252 MSH6P52701 1360 aa36.35■■■■□ 3.41
NME3-206ENST00000564252 PHF23Q9BUL5 403 aaPredicted RBP36.34■■■■□ 3.41
NME3-206ENST00000564252 PIK3R4Q99570 1358 aa36.29■■■■□ 3.4
NME3-206ENST00000564252 NAIPQ13075 1403 aa36.29■■■■□ 3.4
NME3-206ENST00000564252 NCOA3Q9Y6Q9 1424 aa36.26■■■■□ 3.4
NME3-206ENST00000564252 TRPM2O94759 1503 aa36.24■■■■□ 3.39
NME3-206ENST00000564252 SLAIN2Q9P270 581 aa36.24■■■■□ 3.39
NME3-206ENST00000564252 NRXN3Q9Y4C0 1643 aa36.21■■■■□ 3.39
NME3-206ENST00000564252 CLTCL1P53675 1640 aa36.2■■■■□ 3.39
NME3-206ENST00000564252 PTPRUQ92729 1446 aa36.2■■■■□ 3.39
NME3-206ENST00000564252 SETBP1Q9Y6X0 1596 aa36.19■■■■□ 3.38
NME3-206ENST00000564252 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.15■■■■□ 3.38
NME3-206ENST00000564252 ZNF326Q5BKZ1 582 aaKnown RBP36.15■■■■□ 3.38
NME3-206ENST00000564252 AMOTL2Q9Y2J4 779 aa36.15■■■■□ 3.38
NME3-206ENST00000564252 HFM1A2PYH4 1435 aa36.15■■■■□ 3.38
NME3-206ENST00000564252 PHLPP1O60346 1717 aa36.14■■■■□ 3.38
NME3-206ENST00000564252 C14orf37Q86TY3 774 aa36.14■■■■□ 3.38
NME3-206ENST00000564252 RGS17Q9UGC6 210 aaPredicted RBP36.14■■■■□ 3.38
NME3-206ENST00000564252 NEXMIFQ5QGS0 1516 aa36.12■■■■□ 3.37
NME3-206ENST00000564252 XRN1Q8IZH2 1706 aaKnown RBP36.11■■■■□ 3.37
NME3-206ENST00000564252 C19orf44Q9H6X5 657 aa36.11■■■■□ 3.37
NME3-206ENST00000564252 KIF1BO60333 1816 aa36.08■■■■□ 3.37
NME3-206ENST00000564252 CADPS2Q86UW7 1296 aa36.08■■■■□ 3.37
NME3-206ENST00000564252 COL16A1Q07092 1604 aaPredicted RBP36.06■■■■□ 3.36
NME3-206ENST00000564252 ATF3P18847 181 aa36.05■■■■□ 3.36
NME3-206ENST00000564252 METP08581 1390 aa36.04■■■■□ 3.36
NME3-206ENST00000564252 TRIM52Q96A61 297 aa36.04■■■■□ 3.36
NME3-206ENST00000564252 JCADQ9P266 1359 aa36.02■■■■□ 3.36
NME3-206ENST00000564252 DCCP43146 1447 aa36■■■■□ 3.35
NME3-206ENST00000564252 AHDC1Q5TGY3 1603 aaPredicted RBP35.99■■■■□ 3.35
NME3-206ENST00000564252 SLC4A1APQ9BWU0 796 aaKnown RBP35.97■■■■□ 3.35
NME3-206ENST00000564252 POTEAQ6S8J7 498 aa35.92■■■■□ 3.34
NME3-206ENST00000564252 BRINP3Q76B58 766 aa35.91■■■■□ 3.34
NME3-206ENST00000564252 SETD1AO15047 1707 aaKnown RBP35.9■■■■□ 3.34
NME3-206ENST00000564252 MST1RQ04912 1400 aa35.88■■■■□ 3.33
NME3-206ENST00000564252 ADGRL3Q9HAR2 1447 aa35.88■■■■□ 3.33
NME3-206ENST00000564252 VGFO15240 615 aaPredicted RBP35.87■■■■□ 3.33
NME3-206ENST00000564252 SHPRHQ149N8 1683 aa35.86■■■■□ 3.33
NME3-206ENST00000564252 ASXL1Q8IXJ9 1541 aa35.86■■■■□ 3.33
NME3-206ENST00000564252 NALCNQ8IZF0 1738 aa35.86■■■■□ 3.33
NME3-206ENST00000564252 RPGRIP1LQ68CZ1 1315 aa35.85■■■■□ 3.33
NME3-206ENST00000564252 SPATA31A6Q5VVP1 1343 aa35.84■■■■□ 3.33
NME3-206ENST00000564252 PPLO60437 1756 aa35.84■■■■□ 3.33
NME3-206ENST00000564252 LRP6O75581 1613 aa35.84■■■■□ 3.33
NME3-206ENST00000564252 FOXD1Q16676 465 aa35.82■■■■□ 3.32
NME3-206ENST00000564252 PTCH1Q13635 1447 aa35.81■■■■□ 3.32
NME3-206ENST00000564252 NHSL1Q5SYE7 1610 aa35.79■■■■□ 3.32
NME3-206ENST00000564252 PRAG1Q86YV5 1406 aa35.76■■■■□ 3.32
NME3-206ENST00000564252 ROBO2Q9HCK4 1378 aa35.76■■■■□ 3.31
NME3-206ENST00000564252 SETD5Q9C0A6 1442 aa35.74■■■■□ 3.31
NME3-206ENST00000564252 CCDC144AA2RUR9 1427 aa35.72■■■■□ 3.31
NME3-206ENST00000564252 MPHOSPH9Q99550 1183 aa35.71■■■■□ 3.31
NME3-206ENST00000564252 MEX3CQ5U5Q3 659 aaKnown RBP35.7■■■■□ 3.31
NME3-206ENST00000564252 SPATA31E1Q6ZUB1 1445 aa35.68■■■■□ 3.3
NME3-206ENST00000564252 C1orf167Q5SNV9 1468 aa35.67■■■■□ 3.3
NME3-206ENST00000564252 DDX17Q92841 729 aaKnown RBP35.65■■■■□ 3.3
NME3-206ENST00000564252 IFT172Q9UG01 1749 aa35.65■■■■□ 3.3
NME3-206ENST00000564252 ADGRF5Q8IZF2 1346 aa35.64■■■■□ 3.3
NME3-206ENST00000564252 LRRC59Q96AG4 307 aaKnown RBP35.63■■■■□ 3.29
NME3-206ENST00000564252 LAMC1P11047 1609 aa35.61■■■■□ 3.29
NME3-206ENST00000564252 NUTM2BA6NNL0 878 aaPredicted RBP35.61■■■■□ 3.29
NME3-206ENST00000564252 NUTM2EB1AL46 878 aaPredicted RBP35.61■■■■□ 3.29
NME3-206ENST00000564252 RGL3Q3MIN7 710 aa35.61■■■■□ 3.29
NME3-206ENST00000564252 ZNF772Q68DY9 489 aaPredicted RBP35.61■■■■□ 3.29
NME3-206ENST00000564252 NUTM2AQ8IVF1 878 aaPredicted RBP35.61■■■■□ 3.29
NME3-206ENST00000564252 ANKRD30BQ9BXX2 1392 aa35.59■■■■□ 3.29
NME3-206ENST00000564252 PNPLA6Q8IY17 1366 aa35.57■■■■□ 3.28
NME3-206ENST00000564252 ORAI2Q96SN7 254 aa35.55■■■■□ 3.28
NME3-206ENST00000564252 ACIN1Q9UKV3 1341 aaKnown RBP35.54■■■■□ 3.28
NME3-206ENST00000564252 CDC42BPGQ6DT37 1551 aa35.52■■■■□ 3.28
NME3-206ENST00000564252 TECPR2O15040 1411 aa35.52■■■■□ 3.28
NME3-206ENST00000564252 PIK3C2GO75747 1445 aa35.52■■■■□ 3.28
NME3-206ENST00000564252 SOS2Q07890 1332 aaPredicted RBP35.5■■■■□ 3.27
NME3-206ENST00000564252 LRPPRCP42704 1394 aaKnown RBP35.5■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms