RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 RPRD2Q5VT52 1461 aaKnown RBP14.42□□□□□ -0.1
UBFD1-203ENST00000564106 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
UBFD1-203ENST00000564106 RBM33Q96EV2 1170 aaKnown RBP14.41□□□□□ -0.1
UBFD1-203ENST00000564106 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
UBFD1-203ENST00000564106 SLC26A8Q96RN1 970 aa14.4□□□□□ -0.1
UBFD1-203ENST00000564106 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
UBFD1-203ENST00000564106 ACIN1Q9UKV3 1341 aaKnown RBP14.4□□□□□ -0.1
UBFD1-203ENST00000564106 NWD1Q149M9 1564 aa14.39□□□□□ -0.11
UBFD1-203ENST00000564106 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
UBFD1-203ENST00000564106 MED1Q15648 1581 aaPredicted RBP14.39□□□□□ -0.11
UBFD1-203ENST00000564106 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
UBFD1-203ENST00000564106 RIMS2Q9UQ26 1411 aa14.37□□□□□ -0.11
UBFD1-203ENST00000564106 RAB3GAP2Q9H2M9 1393 aa14.36□□□□□ -0.11
UBFD1-203ENST00000564106 NUTM2DQ5VT03 806 aaPredicted RBP14.36□□□□□ -0.11
UBFD1-203ENST00000564106 NUP155O75694 1391 aa14.35□□□□□ -0.11
UBFD1-203ENST00000564106 SPHKAPQ2M3C7 1700 aa14.35□□□□□ -0.11
UBFD1-203ENST00000564106 TOM1O60784 492 aa14.35□□□□□ -0.11
UBFD1-203ENST00000564106 EID1Q9Y6B2 187 aa14.35□□□□□ -0.11
UBFD1-203ENST00000564106 CHD2O14647 1828 aaKnown RBP14.35□□□□□ -0.11
UBFD1-203ENST00000564106 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
UBFD1-203ENST00000564106 NRXN3Q9Y4C0 1643 aa14.34□□□□□ -0.11
UBFD1-203ENST00000564106 ADAMTS13Q76LX8 1427 aa14.34□□□□□ -0.11
UBFD1-203ENST00000564106 SLC52A1Q9NWF4 448 aa14.34□□□□□ -0.11
UBFD1-203ENST00000564106 CLTCL1P53675 1640 aa14.33□□□□□ -0.11
UBFD1-203ENST00000564106 NAIPQ13075 1403 aa14.33□□□□□ -0.11
UBFD1-203ENST00000564106 PLEKHG1Q9ULL1 1385 aa14.33□□□□□ -0.12
UBFD1-203ENST00000564106 KCNA6P17658 529 aa14.31□□□□□ -0.12
UBFD1-203ENST00000564106 DHX57Q6P158 1386 aaKnown RBP14.31□□□□□ -0.12
UBFD1-203ENST00000564106 CHGAP10645 457 aaKnown RBP14.3□□□□□ -0.12
UBFD1-203ENST00000564106 PTPRUQ92729 1446 aa14.3□□□□□ -0.12
UBFD1-203ENST00000564106 NKTRP30414 1462 aaKnown RBP14.3□□□□□ -0.12
UBFD1-203ENST00000564106 ROBO1Q9Y6N7 1651 aa14.3□□□□□ -0.12
UBFD1-203ENST00000564106 TRPM2O94759 1503 aa14.26□□□□□ -0.13
UBFD1-203ENST00000564106 PROSER2Q86WR7 435 aaPredicted RBP14.26□□□□□ -0.13
UBFD1-203ENST00000564106 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
UBFD1-203ENST00000564106 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
UBFD1-203ENST00000564106 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
UBFD1-203ENST00000564106 BCANQ96GW7 911 aa14.24□□□□□ -0.13
UBFD1-203ENST00000564106 DIP2AQ14689 1571 aa14.24□□□□□ -0.13
UBFD1-203ENST00000564106 FAM135BQ49AJ0 1406 aa14.24□□□□□ -0.13
UBFD1-203ENST00000564106 SETBP1Q9Y6X0 1596 aa14.23□□□□□ -0.13
UBFD1-203ENST00000564106 SOCS7O14512 581 aa14.23□□□□□ -0.13
UBFD1-203ENST00000564106 SETD1AO15047 1707 aaKnown RBP14.23□□□□□ -0.13
UBFD1-203ENST00000564106 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
UBFD1-203ENST00000564106 TBX22Q9Y458 520 aa14.22□□□□□ -0.13
UBFD1-203ENST00000564106 METP08581 1390 aa14.21□□□□□ -0.14
UBFD1-203ENST00000564106 RGS17Q9UGC6 210 aaPredicted RBP14.2□□□□□ -0.14
UBFD1-203ENST00000564106 KIF1BO60333 1816 aa14.2□□□□□ -0.14
UBFD1-203ENST00000564106 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
UBFD1-203ENST00000564106 PHLPP1O60346 1717 aa14.19□□□□□ -0.14
UBFD1-203ENST00000564106 FOXD1Q16676 465 aa14.19□□□□□ -0.14
UBFD1-203ENST00000564106 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.18□□□□□ -0.14
UBFD1-203ENST00000564106 NALCNQ8IZF0 1738 aa14.17□□□□□ -0.14
UBFD1-203ENST00000564106 MSH6P52701 1360 aa14.17□□□□□ -0.14
UBFD1-203ENST00000564106 PPLO60437 1756 aa14.17□□□□□ -0.14
UBFD1-203ENST00000564106 AMOTL2Q9Y2J4 779 aa14.16□□□□□ -0.14
UBFD1-203ENST00000564106 PIK3R4Q99570 1358 aa14.15□□□□□ -0.14
UBFD1-203ENST00000564106 SLAIN2Q9P270 581 aa14.15□□□□□ -0.14
UBFD1-203ENST00000564106 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
UBFD1-203ENST00000564106 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
UBFD1-203ENST00000564106 LRP6O75581 1613 aa14.13□□□□□ -0.15
UBFD1-203ENST00000564106 AHDC1Q5TGY3 1603 aaPredicted RBP14.12□□□□□ -0.15
UBFD1-203ENST00000564106 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
UBFD1-203ENST00000564106 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
UBFD1-203ENST00000564106 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
UBFD1-203ENST00000564106 MST1RQ04912 1400 aa14.11□□□□□ -0.15
UBFD1-203ENST00000564106 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
UBFD1-203ENST00000564106 TIMELESSQ9UNS1 1208 aa14.11□□□□□ -0.15
UBFD1-203ENST00000564106 ASXL1Q8IXJ9 1541 aa14.1□□□□□ -0.15
UBFD1-203ENST00000564106 POTEAQ6S8J7 498 aa14.09□□□□□ -0.15
UBFD1-203ENST00000564106 PHF23Q9BUL5 403 aaPredicted RBP14.09□□□□□ -0.15
UBFD1-203ENST00000564106 ROBO2Q9HCK4 1378 aa14.09□□□□□ -0.15
UBFD1-203ENST00000564106 NHSL1Q5SYE7 1610 aa14.08□□□□□ -0.15
UBFD1-203ENST00000564106 SPATA31E1Q6ZUB1 1445 aa14.08□□□□□ -0.15
UBFD1-203ENST00000564106 BRINP3Q76B58 766 aa14.08□□□□□ -0.16
UBFD1-203ENST00000564106 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
UBFD1-203ENST00000564106 DDX17Q92841 729 aaKnown RBP14.08□□□□□ -0.16
UBFD1-203ENST00000564106 ADGRL3Q9HAR2 1447 aa14.07□□□□□ -0.16
UBFD1-203ENST00000564106 C19orf44Q9H6X5 657 aa14.07□□□□□ -0.16
UBFD1-203ENST00000564106 SHPRHQ149N8 1683 aa14.07□□□□□ -0.16
UBFD1-203ENST00000564106 ADGRF5Q8IZF2 1346 aa14.06□□□□□ -0.16
UBFD1-203ENST00000564106 MPHOSPH9Q99550 1183 aa14.05□□□□□ -0.16
UBFD1-203ENST00000564106 DCCP43146 1447 aa14.05□□□□□ -0.16
UBFD1-203ENST00000564106 CADPS2Q86UW7 1296 aa14.04□□□□□ -0.16
UBFD1-203ENST00000564106 JCADQ9P266 1359 aa14.04□□□□□ -0.16
UBFD1-203ENST00000564106 PTCH1Q13635 1447 aa14.04□□□□□ -0.16
UBFD1-203ENST00000564106 ATF3P18847 181 aa14.03□□□□□ -0.16
UBFD1-203ENST00000564106 PRAG1Q86YV5 1406 aa14.03□□□□□ -0.16
UBFD1-203ENST00000564106 CCDC144AA2RUR9 1427 aa14.01□□□□□ -0.17
UBFD1-203ENST00000564106 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
UBFD1-203ENST00000564106 C1orf167Q5SNV9 1468 aa14□□□□□ -0.17
UBFD1-203ENST00000564106 TONSLQ96HA7 1378 aa14□□□□□ -0.17
UBFD1-203ENST00000564106 PLEKHH1Q9ULM0 1364 aa14□□□□□ -0.17
UBFD1-203ENST00000564106 LAMC1P11047 1609 aa14□□□□□ -0.17
UBFD1-203ENST00000564106 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
UBFD1-203ENST00000564106 RPGRIP1LQ68CZ1 1315 aa13.98□□□□□ -0.17
UBFD1-203ENST00000564106 VGFO15240 615 aaPredicted RBP13.98□□□□□ -0.17
UBFD1-203ENST00000564106 ORAI2Q96SN7 254 aa13.98□□□□□ -0.17
UBFD1-203ENST00000564106 KNDC1Q76NI1 1749 aa13.98□□□□□ -0.17
UBFD1-203ENST00000564106 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms