RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 CHGAP10645 457 aaKnown RBP32.14■■■□□ 2.74
HERC2-204ENST00000563945 RBM33Q96EV2 1170 aaKnown RBP32.14■■■□□ 2.74
HERC2-204ENST00000563945 TET3O43151 1660 aa32.13■■■□□ 2.73
HERC2-204ENST00000563945 MSH6P52701 1360 aa32.08■■■□□ 2.73
HERC2-204ENST00000563945 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.08■■■□□ 2.73
HERC2-204ENST00000563945 NKTRP30414 1462 aaKnown RBP32.06■■■□□ 2.72
HERC2-204ENST00000563945 RIMS2Q9UQ26 1411 aa32.06■■■□□ 2.72
HERC2-204ENST00000563945 PLEKHG1Q9ULL1 1385 aa32.05■■■□□ 2.72
HERC2-204ENST00000563945 SLAIN2Q9P270 581 aa32.01■■■□□ 2.71
HERC2-204ENST00000563945 TBX22Q9Y458 520 aa32.01■■■□□ 2.71
HERC2-204ENST00000563945 ZFYVE9O95405 1425 aa32■■■□□ 2.71
HERC2-204ENST00000563945 ITGAEP38570 1179 aa32■■■□□ 2.71
HERC2-204ENST00000563945 C14orf37Q86TY3 774 aa32■■■□□ 2.71
HERC2-204ENST00000563945 ROCK1Q13464 1354 aa31.99■■■□□ 2.71
HERC2-204ENST00000563945 GCC2Q8IWJ2 1684 aa31.99■■■□□ 2.71
HERC2-204ENST00000563945 NWD1Q149M9 1564 aa31.98■■■□□ 2.71
HERC2-204ENST00000563945 ROBO1Q9Y6N7 1651 aa31.96■■■□□ 2.71
HERC2-204ENST00000563945 RGS17Q9UGC6 210 aaPredicted RBP31.96■■■□□ 2.71
HERC2-204ENST00000563945 MYO5BQ9ULV0 1848 aa31.96■■■□□ 2.71
HERC2-204ENST00000563945 UNC13BO14795 1591 aa31.95■■■□□ 2.71
HERC2-204ENST00000563945 NUTM2DQ5VT03 806 aaPredicted RBP31.95■■■□□ 2.71
HERC2-204ENST00000563945 TMEM131LA2VDJ0 1609 aa31.95■■■□□ 2.71
HERC2-204ENST00000563945 NUP155O75694 1391 aa31.94■■■□□ 2.7
HERC2-204ENST00000563945 CHD2O14647 1828 aaKnown RBP31.9■■■□□ 2.7
HERC2-204ENST00000563945 E9PCH4 1651 aa31.88■■■□□ 2.69
HERC2-204ENST00000563945 NCOA3Q9Y6Q9 1424 aa31.87■■■□□ 2.69
HERC2-204ENST00000563945 PPARGC1BQ86YN6 1023 aaKnown RBP31.86■■■□□ 2.69
HERC2-204ENST00000563945 ATF3P18847 181 aa31.85■■■□□ 2.69
HERC2-204ENST00000563945 CADPS2Q86UW7 1296 aa31.85■■■□□ 2.69
HERC2-204ENST00000563945 IQGAP3Q86VI3 1631 aa31.85■■■□□ 2.69
HERC2-204ENST00000563945 PIK3R4Q99570 1358 aa31.84■■■□□ 2.69
HERC2-204ENST00000563945 JCADQ9P266 1359 aa31.83■■■□□ 2.69
HERC2-204ENST00000563945 C19orf44Q9H6X5 657 aa31.83■■■□□ 2.69
HERC2-204ENST00000563945 POTEAQ6S8J7 498 aa31.82■■■□□ 2.68
HERC2-204ENST00000563945 ADAMTS13Q76LX8 1427 aa31.81■■■□□ 2.68
HERC2-204ENST00000563945 PHLPP1O60346 1717 aa31.8■■■□□ 2.68
HERC2-204ENST00000563945 ZNF326Q5BKZ1 582 aaKnown RBP31.8■■■□□ 2.68
HERC2-204ENST00000563945 AMOTL2Q9Y2J4 779 aa31.8■■■□□ 2.68
HERC2-204ENST00000563945 DIP2AQ14689 1571 aa31.79■■■□□ 2.68
HERC2-204ENST00000563945 TRPM2O94759 1503 aa31.75■■■□□ 2.67
HERC2-204ENST00000563945 MEX3CQ5U5Q3 659 aaKnown RBP31.73■■■□□ 2.67
HERC2-204ENST00000563945 SPATA31A6Q5VVP1 1343 aa31.69■■■□□ 2.66
HERC2-204ENST00000563945 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.68■■■□□ 2.66
HERC2-204ENST00000563945 PTPRUQ92729 1446 aa31.65■■■□□ 2.66
HERC2-204ENST00000563945 COL16A1Q07092 1604 aaPredicted RBP31.64■■■□□ 2.65
HERC2-204ENST00000563945 SPHKAPQ2M3C7 1700 aa31.62■■■□□ 2.65
HERC2-204ENST00000563945 ZNF772Q68DY9 489 aaPredicted RBP31.61■■■□□ 2.65
HERC2-204ENST00000563945 BRINP3Q76B58 766 aa31.61■■■□□ 2.65
HERC2-204ENST00000563945 AHDC1Q5TGY3 1603 aaPredicted RBP31.58■■■□□ 2.65
HERC2-204ENST00000563945 DCCP43146 1447 aa31.58■■■□□ 2.65
HERC2-204ENST00000563945 TRIM52Q96A61 297 aa31.57■■■□□ 2.64
HERC2-204ENST00000563945 SETBP1Q9Y6X0 1596 aa31.56■■■□□ 2.64
HERC2-204ENST00000563945 NUTM2BA6NNL0 878 aaPredicted RBP31.56■■■□□ 2.64
HERC2-204ENST00000563945 NUTM2EB1AL46 878 aaPredicted RBP31.56■■■□□ 2.64
HERC2-204ENST00000563945 NUTM2AQ8IVF1 878 aaPredicted RBP31.56■■■□□ 2.64
HERC2-204ENST00000563945 METP08581 1390 aa31.55■■■□□ 2.64
HERC2-204ENST00000563945 LRP6O75581 1613 aa31.51■■■□□ 2.63
HERC2-204ENST00000563945 NRXN3Q9Y4C0 1643 aa31.51■■■□□ 2.63
HERC2-204ENST00000563945 LRRC59Q96AG4 307 aaKnown RBP31.5■■■□□ 2.63
HERC2-204ENST00000563945 XRN1Q8IZH2 1706 aaKnown RBP31.49■■■□□ 2.63
HERC2-204ENST00000563945 VGFO15240 615 aaPredicted RBP31.49■■■□□ 2.63
HERC2-204ENST00000563945 SHPRHQ149N8 1683 aa31.48■■■□□ 2.63
HERC2-204ENST00000563945 NAIPQ13075 1403 aa31.48■■■□□ 2.63
HERC2-204ENST00000563945 RRBP1Q9P2E9 1410 aaKnown RBP31.48■■■□□ 2.63
HERC2-204ENST00000563945 CLTCL1P53675 1640 aa31.46■■■□□ 2.63
HERC2-204ENST00000563945 MST1RQ04912 1400 aa31.46■■■□□ 2.63
HERC2-204ENST00000563945 ASXL1Q8IXJ9 1541 aa31.45■■■□□ 2.63
HERC2-204ENST00000563945 KIF1BO60333 1816 aa31.45■■■□□ 2.63
HERC2-204ENST00000563945 RXRBP28702 533 aa31.45■■■□□ 2.63
HERC2-204ENST00000563945 NEXMIFQ5QGS0 1516 aa31.44■■■□□ 2.62
HERC2-204ENST00000563945 SLC4A1APQ9BWU0 796 aaKnown RBP31.44■■■□□ 2.62
HERC2-204ENST00000563945 ADGRL3Q9HAR2 1447 aa31.43■■■□□ 2.62
HERC2-204ENST00000563945 SETD5Q9C0A6 1442 aa31.41■■■□□ 2.62
HERC2-204ENST00000563945 RPGRIP1LQ68CZ1 1315 aa31.41■■■□□ 2.62
HERC2-204ENST00000563945 SETD1AO15047 1707 aaKnown RBP31.4■■■□□ 2.62
HERC2-204ENST00000563945 DDX17Q92841 729 aaKnown RBP31.37■■■□□ 2.61
HERC2-204ENST00000563945 AFF2P51816 1311 aa31.37■■■□□ 2.61
HERC2-204ENST00000563945 HFM1A2PYH4 1435 aa31.33■■■□□ 2.61
HERC2-204ENST00000563945 C8orf37Q96NL8 207 aa31.33■■■□□ 2.61
HERC2-204ENST00000563945 NHSL1Q5SYE7 1610 aa31.32■■■□□ 2.6
HERC2-204ENST00000563945 UPF1Q92900 1129 aaKnown RBP eCLIP31.31■■■□□ 2.6
HERC2-204ENST00000563945 C1orf167Q5SNV9 1468 aa31.3■■■□□ 2.6
HERC2-204ENST00000563945 PTCH1Q13635 1447 aa31.3■■■□□ 2.6
HERC2-204ENST00000563945 NALCNQ8IZF0 1738 aa31.29■■■□□ 2.6
HERC2-204ENST00000563945 PNPLA6Q8IY17 1366 aa31.29■■■□□ 2.6
HERC2-204ENST00000563945 QTRT2Q9H974 415 aaKnown RBP31.28■■■□□ 2.6
HERC2-204ENST00000563945 ROBO2Q9HCK4 1378 aa31.28■■■□□ 2.6
HERC2-204ENST00000563945 NGLY1Q96IV0 654 aa31.27■■■□□ 2.6
HERC2-204ENST00000563945 ORAI2Q96SN7 254 aa31.27■■■□□ 2.6
HERC2-204ENST00000563945 ADAMTS2O95450 1211 aa31.25■■■□□ 2.59
HERC2-204ENST00000563945 RBM6P78332 1123 aaKnown RBP31.23■■■□□ 2.59
HERC2-204ENST00000563945 CDK12Q9NYV4 1490 aaPredicted RBP31.22■■■□□ 2.59
HERC2-204ENST00000563945 FOXD1Q16676 465 aa31.22■■■□□ 2.59
HERC2-204ENST00000563945 RGL3Q3MIN7 710 aa31.21■■■□□ 2.59
HERC2-204ENST00000563945 SOS2Q07890 1332 aaPredicted RBP31.2■■■□□ 2.58
HERC2-204ENST00000563945 ESCO1Q5FWF5 840 aa31.18■■■□□ 2.58
HERC2-204ENST00000563945 CCDC144AA2RUR9 1427 aa31.17■■■□□ 2.58
HERC2-204ENST00000563945 PPLO60437 1756 aa31.16■■■□□ 2.58
HERC2-204ENST00000563945 STK26Q9P289 416 aa31.16■■■□□ 2.58
HERC2-204ENST00000563945 PRAG1Q86YV5 1406 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms