RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 TMEM2Q9UHN6 1383 aa38.95■■■■□ 3.83
SH3GL3-205ENST00000563901 ZFYVE9O95405 1425 aa38.95■■■■□ 3.83
SH3GL3-205ENST00000563901 THEMISQ8N1K5 641 aaPredicted RBP38.95■■■■□ 3.83
SH3GL3-205ENST00000563901 SLIT1O75093 1534 aa38.93■■■■□ 3.82
SH3GL3-205ENST00000563901 ARHGAP23Q9P227 1491 aa38.92■■■■□ 3.82
SH3GL3-205ENST00000563901 RPGRIP1LQ68CZ1 1315 aa38.9■■■■□ 3.82
SH3GL3-205ENST00000563901 HSPA2P54652 639 aa38.89■■■■□ 3.82
SH3GL3-205ENST00000563901 SENP3Q9H4L4 574 aaPredicted RBP38.89■■■■□ 3.82
SH3GL3-205ENST00000563901 TIMELESSQ9UNS1 1208 aa38.87■■■■□ 3.81
SH3GL3-205ENST00000563901 MYOM2P54296 1465 aa38.86■■■■□ 3.81
SH3GL3-205ENST00000563901 ADGRF5Q8IZF2 1346 aa38.85■■■■□ 3.81
SH3GL3-205ENST00000563901 LTKP29376 864 aa38.85■■■■□ 3.81
SH3GL3-205ENST00000563901 POLR1AO95602 1720 aaPredicted RBP38.83■■■■□ 3.81
SH3GL3-205ENST00000563901 TXNDC2Q86VQ3 553 aa38.81■■■■□ 3.8
SH3GL3-205ENST00000563901 PPP1R15AO75807 674 aaPredicted RBP38.79■■■■□ 3.8
SH3GL3-205ENST00000563901 SCAF11Q99590 1463 aaKnown RBP38.79■■■■□ 3.8
SH3GL3-205ENST00000563901 NRXN1Q9ULB1 1477 aa38.77■■■■□ 3.8
SH3GL3-205ENST00000563901 PRAG1Q86YV5 1406 aa38.77■■■■□ 3.8
SH3GL3-205ENST00000563901 VGFO15240 615 aaPredicted RBP38.77■■■■□ 3.8
SH3GL3-205ENST00000563901 NBPF8Q3BBV2 869 aa38.77■■■■□ 3.8
SH3GL3-205ENST00000563901 IQGAP1P46940 1657 aa38.76■■■■□ 3.8
SH3GL3-205ENST00000563901 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.76■■■■□ 3.8
SH3GL3-205ENST00000563901 EID1Q9Y6B2 187 aa38.76■■■■□ 3.8
SH3GL3-205ENST00000563901 AEBP2Q6ZN18 517 aaPredicted RBP38.74■■■■□ 3.79
SH3GL3-205ENST00000563901 NRXN3Q9Y4C0 1643 aa38.73■■■■□ 3.79
SH3GL3-205ENST00000563901 NCKAP5LQ9HCH0 1330 aa38.72■■■■□ 3.79
SH3GL3-205ENST00000563901 PIK3C2GO75747 1445 aa38.72■■■■□ 3.79
SH3GL3-205ENST00000563901 ANKLE2Q86XL3 938 aa38.72■■■■□ 3.79
SH3GL3-205ENST00000563901 STRCQ7RTU9 1775 aa38.72■■■■□ 3.79
SH3GL3-205ENST00000563901 HDGFP51858 240 aaKnown RBP38.71■■■■□ 3.79
SH3GL3-205ENST00000563901 ZEB1P37275 1124 aaPredicted RBP38.71■■■■□ 3.79
SH3GL3-205ENST00000563901 TRPM1Q7Z4N2 1603 aa38.69■■■■□ 3.78
SH3GL3-205ENST00000563901 STAC3Q96MF2 364 aa38.67■■■■□ 3.78
SH3GL3-205ENST00000563901 PLEKHG1Q9ULL1 1385 aa38.67■■■■□ 3.78
SH3GL3-205ENST00000563901 SETBP1Q9Y6X0 1596 aa38.66■■■■□ 3.78
SH3GL3-205ENST00000563901 SETD1AO15047 1707 aaKnown RBP38.64■■■■□ 3.78
SH3GL3-205ENST00000563901 BCANQ96GW7 911 aa38.63■■■■□ 3.78
SH3GL3-205ENST00000563901 ALKQ9UM73 1620 aa38.62■■■■□ 3.77
SH3GL3-205ENST00000563901 CFAP70Q5T0N1 1121 aa38.62■■■■□ 3.77
SH3GL3-205ENST00000563901 KIAA1210Q9ULL0 1709 aa38.61■■■■□ 3.77
SH3GL3-205ENST00000563901 MED14O60244 1454 aa38.6■■■■□ 3.77
SH3GL3-205ENST00000563901 NPHP4O75161 1426 aaPredicted RBP38.6■■■■□ 3.77
SH3GL3-205ENST00000563901 LAMC1P11047 1609 aa38.59■■■■□ 3.77
SH3GL3-205ENST00000563901 ADAMTS13Q76LX8 1427 aa38.58■■■■□ 3.77
SH3GL3-205ENST00000563901 SLC26A8Q96RN1 970 aa38.56■■■■□ 3.76
SH3GL3-205ENST00000563901 RALGAPBQ86X10 1494 aa38.56■■■■□ 3.76
SH3GL3-205ENST00000563901 NBPF1Q3BBV0 1214 aa38.56■■■■□ 3.76
SH3GL3-205ENST00000563901 C14orf93Q9H972 538 aaKnown RBP38.55■■■■□ 3.76
SH3GL3-205ENST00000563901 ASXL1Q8IXJ9 1541 aa38.55■■■■□ 3.76
SH3GL3-205ENST00000563901 TMEM132EQ6IEE7 984 aa38.49■■■■□ 3.75
SH3GL3-205ENST00000563901 ADGRB1O14514 1584 aa38.48■■■■□ 3.75
SH3GL3-205ENST00000563901 ROCK2O75116 1388 aaKnown RBP38.48■■■■□ 3.75
SH3GL3-205ENST00000563901 DIP2AQ14689 1571 aa38.48■■■■□ 3.75
SH3GL3-205ENST00000563901 METP08581 1390 aa38.47■■■■□ 3.75
SH3GL3-205ENST00000563901 TBX22Q9Y458 520 aa38.41■■■■□ 3.74
SH3GL3-205ENST00000563901 GPRASP1Q5JY77 1395 aa38.39■■■■□ 3.74
SH3GL3-205ENST00000563901 CARD11Q9BXL7 1154 aa38.37■■■■□ 3.73
SH3GL3-205ENST00000563901 PTPRUQ92729 1446 aa38.35■■■■□ 3.73
SH3GL3-205ENST00000563901 CHD2O14647 1828 aaKnown RBP38.35■■■■□ 3.73
SH3GL3-205ENST00000563901 STK26Q9P289 416 aa38.34■■■■□ 3.73
SH3GL3-205ENST00000563901 YTHDC2Q9H6S0 1430 aaKnown RBP38.33■■■■□ 3.73
SH3GL3-205ENST00000563901 ARHGEF28Q8N1W1 1705 aaKnown RBP38.29■■■■□ 3.72
SH3GL3-205ENST00000563901 XRN1Q8IZH2 1706 aaKnown RBP38.29■■■■□ 3.72
SH3GL3-205ENST00000563901 STRCP1A6NGW2 1772 aa38.29■■■■□ 3.72
SH3GL3-205ENST00000563901 KNDC1Q76NI1 1749 aa38.28■■■■□ 3.72
SH3GL3-205ENST00000563901 TRAK1Q9UPV9 953 aa38.27■■■■□ 3.72
SH3GL3-205ENST00000563901 LRPPRCP42704 1394 aaKnown RBP38.27■■■■□ 3.72
SH3GL3-205ENST00000563901 PIK3R4Q99570 1358 aa38.24■■■■□ 3.71
SH3GL3-205ENST00000563901 USP47Q96K76 1375 aa38.23■■■■□ 3.71
SH3GL3-205ENST00000563901 AMOTL2Q9Y2J4 779 aa38.23■■■■□ 3.71
SH3GL3-205ENST00000563901 DMRT2Q9Y5R5 561 aa38.23■■■■□ 3.71
SH3GL3-205ENST00000563901 NWD1Q149M9 1564 aa38.22■■■■□ 3.71
SH3GL3-205ENST00000563901 CPS1P31327 1500 aa38.2■■■■□ 3.71
SH3GL3-205ENST00000563901 KCNA6P17658 529 aa38.19■■■■□ 3.7
SH3GL3-205ENST00000563901 ABCC11Q96J66 1382 aa38.18■■■■□ 3.7
SH3GL3-205ENST00000563901 TECPR2O15040 1411 aa38.17■■■■□ 3.7
SH3GL3-205ENST00000563901 HIRIP3Q9BW71 556 aaPredicted RBP38.16■■■■□ 3.7
SH3GL3-205ENST00000563901 ROBO2Q9HCK4 1378 aa38.16■■■■□ 3.7
SH3GL3-205ENST00000563901 DLC1Q96QB1 1528 aa38.16■■■■□ 3.7
SH3GL3-205ENST00000563901 ZNF335Q9H4Z2 1342 aaPredicted RBP38.16■■■■□ 3.7
SH3GL3-205ENST00000563901 QRICH2Q9H0J4 1663 aa38.13■■■■□ 3.7
SH3GL3-205ENST00000563901 HSPA5P11021 654 aaKnown RBP38.13■■■■□ 3.69
SH3GL3-205ENST00000563901 PLEKHH1Q9ULM0 1364 aa38.13■■■■□ 3.69
SH3GL3-205ENST00000563901 EIF4G2P78344 907 aaKnown RBP eCLIP38.12■■■■□ 3.694e-7■□□□□ 9.9
SH3GL3-205ENST00000563901 WAPLQ7Z5K2 1190 aa38.12■■■■□ 3.69
SH3GL3-205ENST00000563901 SAFB2Q14151 953 aaKnown RBP eCLIP38.1■■■■□ 3.69
SH3GL3-205ENST00000563901 PRAM1Q96QH2 718 aa38.1■■■■□ 3.69
SH3GL3-205ENST00000563901 PTCH1Q13635 1447 aa38.1■■■■□ 3.69
SH3GL3-205ENST00000563901 ST20-MTHFSA0A0A6YYL1 179 aa38.09■■■■□ 3.69
SH3GL3-205ENST00000563901 EIF3AQ14152 1382 aaKnown RBP38.09■■■■□ 3.69
SH3GL3-205ENST00000563901 RBM33Q96EV2 1170 aaKnown RBP38.06■■■■□ 3.68
SH3GL3-205ENST00000563901 NKTRP30414 1462 aaKnown RBP38.05■■■■□ 3.68
SH3GL3-205ENST00000563901 CENPJQ9HC77 1338 aaPredicted RBP38.04■■■■□ 3.68
SH3GL3-205ENST00000563901 FAM135BQ49AJ0 1406 aa38.04■■■■□ 3.68
SH3GL3-205ENST00000563901 POGKQ9P215 609 aa38.04■■■■□ 3.68
SH3GL3-205ENST00000563901 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.03■■■■□ 3.68
SH3GL3-205ENST00000563901 XIRP1Q702N8 1843 aaKnown RBP37.99■■■■□ 3.67
SH3GL3-205ENST00000563901 SIRT1Q96EB6 747 aa37.99■■■■□ 3.67
SH3GL3-205ENST00000563901 NALCNQ8IZF0 1738 aa37.98■■■■□ 3.67
SH3GL3-205ENST00000563901 PROSER2Q86WR7 435 aaPredicted RBP37.97■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms