RNA–Protein interactions for RNA: ENST00000563774.1

COX4I1-205, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 4

Gene COX4I1, Length 566 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-205ENST00000563774 FOXD1Q16676 465 aa29.87■■■□□ 2.37
COX4I1-205ENST00000563774 RIMS2Q9UQ26 1411 aa29.86■■■□□ 2.37
COX4I1-205ENST00000563774 LTKP29376 864 aa29.84■■■□□ 2.37
COX4I1-205ENST00000563774 ANKRD30BQ9BXX2 1392 aa29.8■■■□□ 2.36
COX4I1-205ENST00000563774 RPGRIP1LQ68CZ1 1315 aa29.8■■■□□ 2.36
COX4I1-205ENST00000563774 PLEKHG1Q9ULL1 1385 aa29.78■■■□□ 2.36
COX4I1-205ENST00000563774 PPP1R15AO75807 674 aaPredicted RBP29.78■■■□□ 2.36
COX4I1-205ENST00000563774 ZNF326Q5BKZ1 582 aaKnown RBP29.78■■■□□ 2.36
COX4I1-205ENST00000563774 NEXMIFQ5QGS0 1516 aa29.75■■■□□ 2.35
COX4I1-205ENST00000563774 SPATA31E1Q6ZUB1 1445 aa29.74■■■□□ 2.35
COX4I1-205ENST00000563774 DIP2AQ14689 1571 aa29.71■■■□□ 2.35
COX4I1-205ENST00000563774 PPLO60437 1756 aa29.69■■■□□ 2.34
COX4I1-205ENST00000563774 VGFO15240 615 aaPredicted RBP29.69■■■□□ 2.34
COX4I1-205ENST00000563774 LTBP4Q8N2S1 1624 aa29.67■■■□□ 2.34
COX4I1-205ENST00000563774 CPS1P31327 1500 aa29.66■■■□□ 2.34
COX4I1-205ENST00000563774 SETBP1Q9Y6X0 1596 aa29.66■■■□□ 2.34
COX4I1-205ENST00000563774 BCANQ96GW7 911 aa29.66■■■□□ 2.34
COX4I1-205ENST00000563774 IFT172Q9UG01 1749 aa29.65■■■□□ 2.34
COX4I1-205ENST00000563774 TBX22Q9Y458 520 aa29.63■■■□□ 2.33
COX4I1-205ENST00000563774 ZNF335Q9H4Z2 1342 aaPredicted RBP29.63■■■□□ 2.33
COX4I1-205ENST00000563774 DHX57Q6P158 1386 aaKnown RBP29.62■■■□□ 2.33
COX4I1-205ENST00000563774 IQSEC2Q5JU85 1478 aa29.61■■■□□ 2.33
COX4I1-205ENST00000563774 PIK3R4Q99570 1358 aa29.61■■■□□ 2.33
COX4I1-205ENST00000563774 STAC3Q96MF2 364 aa29.6■■■□□ 2.33
COX4I1-205ENST00000563774 PCGF6Q9BYE7 350 aa29.6■■■□□ 2.33
COX4I1-205ENST00000563774 ADAMTS13Q76LX8 1427 aa29.6■■■□□ 2.33
COX4I1-205ENST00000563774 RGL3Q3MIN7 710 aa29.59■■■□□ 2.33
COX4I1-205ENST00000563774 NUTM2DQ5VT03 806 aaPredicted RBP29.59■■■□□ 2.33
COX4I1-205ENST00000563774 SLC26A8Q96RN1 970 aa29.58■■■□□ 2.33
COX4I1-205ENST00000563774 NRXN3Q9Y4C0 1643 aa29.57■■■□□ 2.32
COX4I1-205ENST00000563774 CERKQ8TCT0 537 aa29.56■■■□□ 2.32
COX4I1-205ENST00000563774 MYOM2P54296 1465 aa29.55■■■□□ 2.32
COX4I1-205ENST00000563774 NWD1Q149M9 1564 aa29.55■■■□□ 2.32
COX4I1-205ENST00000563774 KCNA6P17658 529 aa29.54■■■□□ 2.32
COX4I1-205ENST00000563774 CHD2O14647 1828 aaKnown RBP29.54■■■□□ 2.32
COX4I1-205ENST00000563774 NKTRP30414 1462 aaKnown RBP29.52■■■□□ 2.32
COX4I1-205ENST00000563774 STRCP1A6NGW2 1772 aa29.52■■■□□ 2.32
COX4I1-205ENST00000563774 NRXN1Q9ULB1 1477 aa29.48■■■□□ 2.31
COX4I1-205ENST00000563774 ALKQ9UM73 1620 aa29.47■■■□□ 2.31
COX4I1-205ENST00000563774 PIK3C2GO75747 1445 aa29.46■■■□□ 2.31
COX4I1-205ENST00000563774 LAMC1P11047 1609 aa29.46■■■□□ 2.31
COX4I1-205ENST00000563774 SETD1AO15047 1707 aaKnown RBP29.45■■■□□ 2.31
COX4I1-205ENST00000563774 ADGRF5Q8IZF2 1346 aa29.45■■■□□ 2.3
COX4I1-205ENST00000563774 LRRC7Q96NW7 1537 aa29.44■■■□□ 2.3
COX4I1-205ENST00000563774 XRN1Q8IZH2 1706 aaKnown RBP29.4■■■□□ 2.3
COX4I1-205ENST00000563774 DCAF11Q8TEB1 546 aa29.4■■■□□ 2.3
COX4I1-205ENST00000563774 SENP3Q9H4L4 574 aaPredicted RBP29.4■■■□□ 2.3
COX4I1-205ENST00000563774 CLSPNQ9HAW4 1339 aa29.39■■■□□ 2.3
COX4I1-205ENST00000563774 NCOA3Q9Y6Q9 1424 aa29.38■■■□□ 2.29
COX4I1-205ENST00000563774 METP08581 1390 aa29.38■■■□□ 2.29
COX4I1-205ENST00000563774 PRAG1Q86YV5 1406 aa29.37■■■□□ 2.29
COX4I1-205ENST00000563774 AMOTL2Q9Y2J4 779 aa29.36■■■□□ 2.29
COX4I1-205ENST00000563774 PROSER2Q86WR7 435 aaPredicted RBP29.35■■■□□ 2.29
COX4I1-205ENST00000563774 C14orf93Q9H972 538 aaKnown RBP29.35■■■□□ 2.29
COX4I1-205ENST00000563774 PTPRUQ92729 1446 aa29.35■■■□□ 2.29
COX4I1-205ENST00000563774 FBXO41Q8TF61 875 aa29.33■■■□□ 2.29
COX4I1-205ENST00000563774 SIN3AQ96ST3 1273 aa29.33■■■□□ 2.29
COX4I1-205ENST00000563774 XIRP1Q702N8 1843 aaKnown RBP29.33■■■□□ 2.29
COX4I1-205ENST00000563774 PTCH1Q13635 1447 aa29.31■■■□□ 2.28
COX4I1-205ENST00000563774 TMEM94Q12767 1356 aa29.31■■■□□ 2.28
COX4I1-205ENST00000563774 KDM2AQ9Y2K7 1162 aa29.31■■■□□ 2.28
COX4I1-205ENST00000563774 NEUROD1Q13562 356 aa29.3■■■□□ 2.28
COX4I1-205ENST00000563774 KIAA1210Q9ULL0 1709 aa29.29■■■□□ 2.28
COX4I1-205ENST00000563774 KNDC1Q76NI1 1749 aa29.28■■■□□ 2.28
COX4I1-205ENST00000563774 LRPPRCP42704 1394 aaKnown RBP29.26■■■□□ 2.28
COX4I1-205ENST00000563774 TOM1O60784 492 aa29.26■■■□□ 2.27
COX4I1-205ENST00000563774 TECPR2O15040 1411 aa29.26■■■□□ 2.27
COX4I1-205ENST00000563774 L3MBTL2Q969R5 705 aa29.25■■■□□ 2.27
COX4I1-205ENST00000563774 ABCC11Q96J66 1382 aa29.25■■■□□ 2.27
COX4I1-205ENST00000563774 ASXL1Q8IXJ9 1541 aa29.25■■■□□ 2.27
COX4I1-205ENST00000563774 CFAP70Q5T0N1 1121 aa29.24■■■□□ 2.27
COX4I1-205ENST00000563774 MSH6P52701 1360 aa29.24■■■□□ 2.27
COX4I1-205ENST00000563774 TONSLQ96HA7 1378 aa29.24■■■□□ 2.27
COX4I1-205ENST00000563774 YTHDC2Q9H6S0 1430 aaKnown RBP29.22■■■□□ 2.27
COX4I1-205ENST00000563774 UBAP1LF5GYI3 381 aa29.2■■■□□ 2.26
COX4I1-205ENST00000563774 SIRT1Q96EB6 747 aa29.2■■■□□ 2.26
COX4I1-205ENST00000563774 ADGRB1O14514 1584 aa29.2■■■□□ 2.26
COX4I1-205ENST00000563774 DCCP43146 1447 aa29.19■■■□□ 2.26
COX4I1-205ENST00000563774 C19orf44Q9H6X5 657 aa29.18■■■□□ 2.26
COX4I1-205ENST00000563774 TMEM132EQ6IEE7 984 aa29.17■■■□□ 2.26
COX4I1-205ENST00000563774 TIMELESSQ9UNS1 1208 aa29.17■■■□□ 2.26
COX4I1-205ENST00000563774 FAM135BQ49AJ0 1406 aa29.17■■■□□ 2.26
COX4I1-205ENST00000563774 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
COX4I1-205ENST00000563774 DLC1Q96QB1 1528 aa29.16■■■□□ 2.26
COX4I1-205ENST00000563774 C14orf37Q86TY3 774 aa29.16■■■□□ 2.26
COX4I1-205ENST00000563774 ADGRL3Q9HAR2 1447 aa29.14■■■□□ 2.26
COX4I1-205ENST00000563774 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
COX4I1-205ENST00000563774 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.13■■■□□ 2.25
COX4I1-205ENST00000563774 CADPS2Q86UW7 1296 aa29.12■■■□□ 2.25
COX4I1-205ENST00000563774 RBM33Q96EV2 1170 aaKnown RBP29.11■■■□□ 2.25
COX4I1-205ENST00000563774 STK26Q9P289 416 aa29.11■■■□□ 2.25
COX4I1-205ENST00000563774 TRPM1Q7Z4N2 1603 aa29.09■■■□□ 2.25
COX4I1-205ENST00000563774 NALCNQ8IZF0 1738 aa29.09■■■□□ 2.25
COX4I1-205ENST00000563774 ATF3P18847 181 aa29.09■■■□□ 2.25
COX4I1-205ENST00000563774 ILDR1Q86SU0 546 aaPredicted RBP29.06■■■□□ 2.24
COX4I1-205ENST00000563774 CDC42BPGQ6DT37 1551 aa29.03■■■□□ 2.24
COX4I1-205ENST00000563774 ARHGEF28Q8N1W1 1705 aaKnown RBP29.01■■■□□ 2.23
COX4I1-205ENST00000563774 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
COX4I1-205ENST00000563774 POGKQ9P215 609 aa29■■■□□ 2.23
COX4I1-205ENST00000563774 TRAK1Q9UPV9 953 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms