RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
NSMCE1-205ENST00000563512 PROX2Q3B8N5 592 aa13.68□□□□□ -0.22
NSMCE1-205ENST00000563512 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
NSMCE1-205ENST00000563512 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
NSMCE1-205ENST00000563512 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
NSMCE1-205ENST00000563512 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
NSMCE1-205ENST00000563512 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
NSMCE1-205ENST00000563512 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
NSMCE1-205ENST00000563512 FHAD1B1AJZ9 1412 aa13.66□□□□□ -0.22
NSMCE1-205ENST00000563512 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
NSMCE1-205ENST00000563512 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
NSMCE1-205ENST00000563512 HRO43593 1189 aa13.65□□□□□ -0.22
NSMCE1-205ENST00000563512 MMRN1Q13201 1228 aa13.65□□□□□ -0.22
NSMCE1-205ENST00000563512 RBM26Q5T8P6 1007 aaKnown RBP13.65□□□□□ -0.22
NSMCE1-205ENST00000563512 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
NSMCE1-205ENST00000563512 ONECUT3O60422 494 aaPredicted RBP13.64□□□□□ -0.23
NSMCE1-205ENST00000563512 PRSS12P56730 875 aa13.64□□□□□ -0.23
NSMCE1-205ENST00000563512 PACS2Q86VP3 889 aa13.64□□□□□ -0.23
NSMCE1-205ENST00000563512 CDCA7LQ96GN5 454 aa13.64□□□□□ -0.23
NSMCE1-205ENST00000563512 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
NSMCE1-205ENST00000563512 CEP170Q5SW79 1584 aa13.63□□□□□ -0.23
NSMCE1-205ENST00000563512 MRPL50Q8N5N7 158 aaKnown RBP13.63□□□□□ -0.23
NSMCE1-205ENST00000563512 KIAA1468Q9P260 1216 aa13.63□□□□□ -0.23
NSMCE1-205ENST00000563512 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
NSMCE1-205ENST00000563512 GOLGA8CPA6NN73 597 aa13.62□□□□□ -0.23
NSMCE1-205ENST00000563512 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
NSMCE1-205ENST00000563512 NUP160Q12769 1436 aa13.61□□□□□ -0.23
NSMCE1-205ENST00000563512 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
NSMCE1-205ENST00000563512 FCHSD2O94868 740 aa13.6□□□□□ -0.23
NSMCE1-205ENST00000563512 RNF166Q96A37 237 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-205ENST00000563512 PTGDRQ13258 359 aa13.59□□□□□ -0.23
NSMCE1-205ENST00000563512 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-205ENST00000563512 NPDC1Q9NQX5 325 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-205ENST00000563512 RBM27Q9P2N5 1060 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-205ENST00000563512 BHMG1C9JSJ3 638 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-205ENST00000563512 TSKSQ9UJT2 592 aa13.58□□□□□ -0.24
NSMCE1-205ENST00000563512 PADI6Q6TGC4 694 aa13.56□□□□□ -0.24
NSMCE1-205ENST00000563512 GPIHBP1Q8IV16 184 aa13.56□□□□□ -0.24
NSMCE1-205ENST00000563512 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
NSMCE1-205ENST00000563512 LAPTM4BQ86VI4 370 aa13.54□□□□□ -0.24
NSMCE1-205ENST00000563512 SEPT9Q9UHD8 586 aaPredicted RBP13.53□□□□□ -0.24
NSMCE1-205ENST00000563512 HIC1Q14526 733 aa13.52□□□□□ -0.25
NSMCE1-205ENST00000563512 IGF1RP08069 1367 aa13.52□□□□□ -0.25
NSMCE1-205ENST00000563512 TATDN2Q93075 761 aa13.51□□□□□ -0.25
NSMCE1-205ENST00000563512 KCTD12Q96CX2 325 aaKnown RBP13.51□□□□□ -0.25
NSMCE1-205ENST00000563512 PNMA3Q9UL41 463 aa13.51□□□□□ -0.25
NSMCE1-205ENST00000563512 FAM98CQ17RN3 349 aaKnown RBP13.5□□□□□ -0.25
NSMCE1-205ENST00000563512 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.5□□□□□ -0.25
NSMCE1-205ENST00000563512 WNT2BQ93097 391 aa13.5□□□□□ -0.25
NSMCE1-205ENST00000563512 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
NSMCE1-205ENST00000563512 BCANQ96GW7 911 aa13.49□□□□□ -0.25
NSMCE1-205ENST00000563512 EEA1Q15075 1411 aa13.48□□□□□ -0.25
NSMCE1-205ENST00000563512 SMAPO00193 183 aa13.48□□□□□ -0.25
NSMCE1-205ENST00000563512 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
NSMCE1-205ENST00000563512 NUDT18Q6ZVK8 323 aa13.48□□□□□ -0.25
NSMCE1-205ENST00000563512 TTC13Q8NBP0 860 aa13.48□□□□□ -0.25
NSMCE1-205ENST00000563512 IQGAP2Q13576 1575 aa13.48□□□□□ -0.25
NSMCE1-205ENST00000563512 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
NSMCE1-205ENST00000563512 GNPATO15228 680 aa13.47□□□□□ -0.25
NSMCE1-205ENST00000563512 ANKK1Q8NFD2 765 aa13.47□□□□□ -0.25
NSMCE1-205ENST00000563512 KIAA0586Q9BVV6 1533 aa13.47□□□□□ -0.25
NSMCE1-205ENST00000563512 RAPGEF2Q9Y4G8 1499 aa13.47□□□□□ -0.25
NSMCE1-205ENST00000563512 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.25
NSMCE1-205ENST00000563512 ZFRQ96KR1 1074 aaKnown RBP13.46□□□□□ -0.25
NSMCE1-205ENST00000563512 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
NSMCE1-205ENST00000563512 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-205ENST00000563512 KIF21BO75037 1637 aa13.42□□□□□ -0.26
NSMCE1-205ENST00000563512 PRXQ9BXM0 1461 aa13.42□□□□□ -0.26
NSMCE1-205ENST00000563512 ERCC6L2Q5T890 1561 aa13.42□□□□□ -0.26
NSMCE1-205ENST00000563512 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
NSMCE1-205ENST00000563512 GPR37O15354 613 aa13.41□□□□□ -0.26
NSMCE1-205ENST00000563512 HCSTQ9UBK5 93 aa13.41□□□□□ -0.26
NSMCE1-205ENST00000563512 THSD4Q6ZMP0 1018 aa13.4□□□□□ -0.26
NSMCE1-205ENST00000563512 OATP04181 439 aa13.39□□□□□ -0.27
NSMCE1-205ENST00000563512 PTPN5P54829 565 aa13.39□□□□□ -0.27
NSMCE1-205ENST00000563512 LRCH3Q96II8 777 aa13.39□□□□□ -0.27
NSMCE1-205ENST00000563512 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
NSMCE1-205ENST00000563512 FAM161AQ3B820 660 aa13.38□□□□□ -0.27
NSMCE1-205ENST00000563512 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-205ENST00000563512 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
NSMCE1-205ENST00000563512 FECHP22830 423 aa13.37□□□□□ -0.27
NSMCE1-205ENST00000563512 EYA1Q99502 592 aa13.37□□□□□ -0.27
NSMCE1-205ENST00000563512 SOWAHBA6NEL2 793 aa13.36□□□□□ -0.27
NSMCE1-205ENST00000563512 BCAMP50895 628 aa13.36□□□□□ -0.27
NSMCE1-205ENST00000563512 SAMD7Q7Z3H4 446 aa13.36□□□□□ -0.27
NSMCE1-205ENST00000563512 PRG4Q92954 1404 aaPredicted RBP13.36□□□□□ -0.27
NSMCE1-205ENST00000563512 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
NSMCE1-205ENST00000563512 SLC4A3P48751 1232 aa13.35□□□□□ -0.27
NSMCE1-205ENST00000563512 RNF40O75150 1001 aa13.33□□□□□ -0.28
NSMCE1-205ENST00000563512 DNAJB2P25686 324 aa13.33□□□□□ -0.28
NSMCE1-205ENST00000563512 CARMIL2Q6F5E8 1435 aa13.31□□□□□ -0.28
NSMCE1-205ENST00000563512 HPS5Q9UPZ3 1129 aa13.31□□□□□ -0.28
NSMCE1-205ENST00000563512 KIF13AQ9H1H9 1805 aa13.3□□□□□ -0.28
NSMCE1-205ENST00000563512 SAMD9Q5K651 1589 aa13.3□□□□□ -0.28
NSMCE1-205ENST00000563512 RCCD1A6NED2 376 aa13.3□□□□□ -0.28
NSMCE1-205ENST00000563512 MAP2K5Q13163 448 aa13.3□□□□□ -0.28
NSMCE1-205ENST00000563512 SWT1Q5T5J6 900 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-205ENST00000563512 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-205ENST00000563512 KRI1Q8N9T8 703 aaKnown RBP13.3□□□□□ -0.28
NSMCE1-205ENST00000563512 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms