RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 BCANQ96GW7 911 aa28.47■■■□□ 2.15
TRADD-203ENST00000563348 PLEKHG1Q9ULL1 1385 aa28.45■■■□□ 2.14
TRADD-203ENST00000563348 MYO5BQ9ULV0 1848 aa28.44■■■□□ 2.14
TRADD-203ENST00000563348 KCNA6P17658 529 aa28.43■■■□□ 2.14
TRADD-203ENST00000563348 LRRC7Q96NW7 1537 aa28.42■■■□□ 2.14
TRADD-203ENST00000563348 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
TRADD-203ENST00000563348 SPHKAPQ2M3C7 1700 aa28.41■■■□□ 2.14
TRADD-203ENST00000563348 TOM1O60784 492 aa28.41■■■□□ 2.14
TRADD-203ENST00000563348 NUTM2DQ5VT03 806 aaPredicted RBP28.41■■■□□ 2.14
TRADD-203ENST00000563348 SENP3Q9H4L4 574 aaPredicted RBP28.4■■■□□ 2.14
TRADD-203ENST00000563348 TBX22Q9Y458 520 aa28.39■■■□□ 2.14
TRADD-203ENST00000563348 ACIN1Q9UKV3 1341 aaKnown RBP28.39■■■□□ 2.13
TRADD-203ENST00000563348 TRPM2O94759 1503 aa28.38■■■□□ 2.13
TRADD-203ENST00000563348 SETD5Q9C0A6 1442 aa28.37■■■□□ 2.13
TRADD-203ENST00000563348 ZNF326Q5BKZ1 582 aaKnown RBP28.37■■■□□ 2.13
TRADD-203ENST00000563348 MPHOSPH9Q99550 1183 aa28.37■■■□□ 2.13
TRADD-203ENST00000563348 FOXD1Q16676 465 aa28.33■■■□□ 2.13
TRADD-203ENST00000563348 CLTCL1P53675 1640 aa28.32■■■□□ 2.12
TRADD-203ENST00000563348 PIP4K2BP78356 416 aa28.31■■■□□ 2.12
TRADD-203ENST00000563348 PROSER2Q86WR7 435 aaPredicted RBP28.31■■■□□ 2.12
TRADD-203ENST00000563348 ADAMTS13Q76LX8 1427 aa28.3■■■□□ 2.12
TRADD-203ENST00000563348 TMEM94Q12767 1356 aa28.27■■■□□ 2.12
TRADD-203ENST00000563348 SCAF1Q9H7N4 1312 aaKnown RBP28.27■■■□□ 2.12
TRADD-203ENST00000563348 RAB3GAP2Q9H2M9 1393 aa28.25■■■□□ 2.11
TRADD-203ENST00000563348 PIK3R4Q99570 1358 aa28.24■■■□□ 2.11
TRADD-203ENST00000563348 NKTRP30414 1462 aaKnown RBP28.23■■■□□ 2.11
TRADD-203ENST00000563348 RBM33Q96EV2 1170 aaKnown RBP28.23■■■□□ 2.11
TRADD-203ENST00000563348 NWD1Q149M9 1564 aa28.23■■■□□ 2.11
TRADD-203ENST00000563348 RPGRIP1LQ68CZ1 1315 aa28.22■■■□□ 2.11
TRADD-203ENST00000563348 ALKQ9UM73 1620 aa28.22■■■□□ 2.11
TRADD-203ENST00000563348 KIF1BO60333 1816 aa28.21■■■□□ 2.11
TRADD-203ENST00000563348 DIP2AQ14689 1571 aa28.2■■■□□ 2.11
TRADD-203ENST00000563348 VGFO15240 615 aaPredicted RBP28.2■■■□□ 2.1
TRADD-203ENST00000563348 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
TRADD-203ENST00000563348 HRCP23327 699 aa28.19■■■□□ 2.1
TRADD-203ENST00000563348 CHD2O14647 1828 aaKnown RBP28.19■■■□□ 2.1
TRADD-203ENST00000563348 CCDC144AA2RUR9 1427 aa28.18■■■□□ 2.1
TRADD-203ENST00000563348 XIRP1Q702N8 1843 aaKnown RBP28.18■■■□□ 2.1
TRADD-203ENST00000563348 HSPA1LP34931 641 aa28.18■■■□□ 2.1
TRADD-203ENST00000563348 AMOTL2Q9Y2J4 779 aa28.17■■■□□ 2.1
TRADD-203ENST00000563348 SETBP1Q9Y6X0 1596 aa28.16■■■□□ 2.1
TRADD-203ENST00000563348 PTPRUQ92729 1446 aa28.13■■■□□ 2.09
TRADD-203ENST00000563348 NRXN3Q9Y4C0 1643 aa28.12■■■□□ 2.09
TRADD-203ENST00000563348 METP08581 1390 aa28.11■■■□□ 2.09
TRADD-203ENST00000563348 NCOA3Q9Y6Q9 1424 aa28.11■■■□□ 2.09
TRADD-203ENST00000563348 RGL3Q3MIN7 710 aa28.11■■■□□ 2.09
TRADD-203ENST00000563348 MSH6P52701 1360 aa28.11■■■□□ 2.09
TRADD-203ENST00000563348 SPATA31E1Q6ZUB1 1445 aa28.09■■■□□ 2.09
TRADD-203ENST00000563348 C14orf37Q86TY3 774 aa28.06■■■□□ 2.08
TRADD-203ENST00000563348 FAM135BQ49AJ0 1406 aa28.06■■■□□ 2.08
TRADD-203ENST00000563348 C19orf44Q9H6X5 657 aa28.05■■■□□ 2.08
TRADD-203ENST00000563348 SLAIN2Q9P270 581 aa28.04■■■□□ 2.08
TRADD-203ENST00000563348 ANKRD30BQ9BXX2 1392 aa28.02■■■□□ 2.08
TRADD-203ENST00000563348 ADGRF5Q8IZF2 1346 aa28.02■■■□□ 2.08
TRADD-203ENST00000563348 PPLO60437 1756 aa27.99■■■□□ 2.07
TRADD-203ENST00000563348 CADPS2Q86UW7 1296 aa27.99■■■□□ 2.07
TRADD-203ENST00000563348 XRN1Q8IZH2 1706 aaKnown RBP27.98■■■□□ 2.07
TRADD-203ENST00000563348 DISP3Q9P2K9 1392 aa27.98■■■□□ 2.07
TRADD-203ENST00000563348 ATF3P18847 181 aa27.97■■■□□ 2.07
TRADD-203ENST00000563348 SETD1AO15047 1707 aaKnown RBP27.89■■■□□ 2.06
TRADD-203ENST00000563348 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.89■■■□□ 2.06
TRADD-203ENST00000563348 ROBO2Q9HCK4 1378 aa27.88■■■□□ 2.05
TRADD-203ENST00000563348 ROBO1Q9Y6N7 1651 aa27.87■■■□□ 2.05
TRADD-203ENST00000563348 DCCP43146 1447 aa27.87■■■□□ 2.05
TRADD-203ENST00000563348 PTCH1Q13635 1447 aa27.87■■■□□ 2.05
TRADD-203ENST00000563348 PRAG1Q86YV5 1406 aa27.87■■■□□ 2.05
TRADD-203ENST00000563348 IFT172Q9UG01 1749 aa27.87■■■□□ 2.05
TRADD-203ENST00000563348 PIK3C2GO75747 1445 aa27.86■■■□□ 2.05
TRADD-203ENST00000563348 C14orf93Q9H972 538 aaKnown RBP27.85■■■□□ 2.05
TRADD-203ENST00000563348 ADGRL3Q9HAR2 1447 aa27.84■■■□□ 2.05
TRADD-203ENST00000563348 TMEM132EQ6IEE7 984 aa27.84■■■□□ 2.05
TRADD-203ENST00000563348 STK26Q9P289 416 aa27.82■■■□□ 2.04
TRADD-203ENST00000563348 NRXN1Q9ULB1 1477 aa27.82■■■□□ 2.04
TRADD-203ENST00000563348 LRPPRCP42704 1394 aaKnown RBP27.81■■■□□ 2.04
TRADD-203ENST00000563348 MYOM2P54296 1465 aa27.81■■■□□ 2.04
TRADD-203ENST00000563348 CFAP70Q5T0N1 1121 aa27.8■■■□□ 2.04
TRADD-203ENST00000563348 BRINP3Q76B58 766 aa27.8■■■□□ 2.04
TRADD-203ENST00000563348 ABCC11Q96J66 1382 aa27.8■■■□□ 2.04
TRADD-203ENST00000563348 STAC3Q96MF2 364 aa27.79■■■□□ 2.04
TRADD-203ENST00000563348 DCAF11Q8TEB1 546 aa27.78■■■□□ 2.04
TRADD-203ENST00000563348 MST1RQ04912 1400 aa27.77■■■□□ 2.04
TRADD-203ENST00000563348 TECPR2O15040 1411 aa27.76■■■□□ 2.04
TRADD-203ENST00000563348 KDM2AQ9Y2K7 1162 aa27.76■■■□□ 2.03
TRADD-203ENST00000563348 MED1Q15648 1581 aaPredicted RBP27.75■■■□□ 2.03
TRADD-203ENST00000563348 WAPLQ7Z5K2 1190 aa27.75■■■□□ 2.03
TRADD-203ENST00000563348 ASXL1Q8IXJ9 1541 aa27.74■■■□□ 2.03
TRADD-203ENST00000563348 ILDR2Q71H61 639 aa27.74■■■□□ 2.03
TRADD-203ENST00000563348 SIRT1Q96EB6 747 aa27.74■■■□□ 2.03
TRADD-203ENST00000563348 YTHDC2Q9H6S0 1430 aaKnown RBP27.74■■■□□ 2.03
TRADD-203ENST00000563348 DHX57Q6P158 1386 aaKnown RBP27.73■■■□□ 2.03
TRADD-203ENST00000563348 NALCNQ8IZF0 1738 aa27.71■■■□□ 2.03
TRADD-203ENST00000563348 JCADQ9P266 1359 aa27.69■■■□□ 2.02
TRADD-203ENST00000563348 PHLPP1O60346 1717 aa27.69■■■□□ 2.02
TRADD-203ENST00000563348 C1orf167Q5SNV9 1468 aa27.68■■■□□ 2.02
TRADD-203ENST00000563348 AHDC1Q5TGY3 1603 aaPredicted RBP27.67■■■□□ 2.02
TRADD-203ENST00000563348 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
TRADD-203ENST00000563348 PLEKHH1Q9ULM0 1364 aa27.67■■■□□ 2.02
TRADD-203ENST00000563348 COL16A1Q07092 1604 aaPredicted RBP27.64■■■□□ 2.02
TRADD-203ENST00000563348 TRIM26Q12899 539 aaPredicted RBP27.64■■■□□ 2.02
TRADD-203ENST00000563348 ORAI2Q96SN7 254 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms