RNA–Protein interactions for RNA: ENST00000563128.5

EPB42-204, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-204ENST00000563128 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
EPB42-204ENST00000563128 TMEM131LA2VDJ0 1609 aa17.02■□□□□ 0.31
EPB42-204ENST00000563128 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
EPB42-204ENST00000563128 CLTCL1P53675 1640 aa17.01■□□□□ 0.31
EPB42-204ENST00000563128 ACIN1Q9UKV3 1341 aaKnown RBP17■□□□□ 0.31
EPB42-204ENST00000563128 CCDC144AA2RUR9 1427 aa17■□□□□ 0.31
EPB42-204ENST00000563128 TRPM2O94759 1503 aa17■□□□□ 0.31
EPB42-204ENST00000563128 MED14O60244 1454 aa16.99■□□□□ 0.31
EPB42-204ENST00000563128 ZFYVE9O95405 1425 aa16.99■□□□□ 0.31
EPB42-204ENST00000563128 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
EPB42-204ENST00000563128 ILDR1Q86SU0 546 aaPredicted RBP16.98■□□□□ 0.31
EPB42-204ENST00000563128 POLR1AO95602 1720 aaPredicted RBP16.97■□□□□ 0.31
EPB42-204ENST00000563128 IQGAP1P46940 1657 aa16.95■□□□□ 0.3
EPB42-204ENST00000563128 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
EPB42-204ENST00000563128 PLEKHG1Q9ULL1 1385 aa16.95■□□□□ 0.3
EPB42-204ENST00000563128 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
EPB42-204ENST00000563128 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
EPB42-204ENST00000563128 VGFO15240 615 aaPredicted RBP16.93■□□□□ 0.3
EPB42-204ENST00000563128 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
EPB42-204ENST00000563128 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
EPB42-204ENST00000563128 ADGRF5Q8IZF2 1346 aa16.93■□□□□ 0.3
EPB42-204ENST00000563128 KCNA6P17658 529 aa16.92■□□□□ 0.3
EPB42-204ENST00000563128 PROSER2Q86WR7 435 aaPredicted RBP16.92■□□□□ 0.3
EPB42-204ENST00000563128 TBX22Q9Y458 520 aa16.92■□□□□ 0.3
EPB42-204ENST00000563128 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
EPB42-204ENST00000563128 UBAP1LF5GYI3 381 aa16.9■□□□□ 0.3
EPB42-204ENST00000563128 RPGRIP1LQ68CZ1 1315 aa16.9■□□□□ 0.3
EPB42-204ENST00000563128 ADAMTS13Q76LX8 1427 aa16.89■□□□□ 0.29
EPB42-204ENST00000563128 FBXO41Q8TF61 875 aa16.89■□□□□ 0.29
EPB42-204ENST00000563128 AMOTL2Q9Y2J4 779 aa16.89■□□□□ 0.29
EPB42-204ENST00000563128 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
EPB42-204ENST00000563128 SPATA31E1Q6ZUB1 1445 aa16.88■□□□□ 0.29
EPB42-204ENST00000563128 PIP4K2BP78356 416 aa16.88■□□□□ 0.29
EPB42-204ENST00000563128 DCAF11Q8TEB1 546 aa16.88■□□□□ 0.29
EPB42-204ENST00000563128 KIF1BO60333 1816 aa16.88■□□□□ 0.29
EPB42-204ENST00000563128 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
EPB42-204ENST00000563128 METP08581 1390 aa16.87■□□□□ 0.29
EPB42-204ENST00000563128 TMEM132EQ6IEE7 984 aa16.86■□□□□ 0.29
EPB42-204ENST00000563128 STK26Q9P289 416 aa16.86■□□□□ 0.29
EPB42-204ENST00000563128 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
EPB42-204ENST00000563128 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
EPB42-204ENST00000563128 PTPRUQ92729 1446 aa16.84■□□□□ 0.29
EPB42-204ENST00000563128 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
EPB42-204ENST00000563128 TMEM94Q12767 1356 aa16.83■□□□□ 0.28
EPB42-204ENST00000563128 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
EPB42-204ENST00000563128 LRRC7Q96NW7 1537 aa16.83■□□□□ 0.28
EPB42-204ENST00000563128 CPS1P31327 1500 aa16.81■□□□□ 0.28
EPB42-204ENST00000563128 TOM1O60784 492 aa16.79■□□□□ 0.28
EPB42-204ENST00000563128 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
EPB42-204ENST00000563128 L3MBTL2Q969R5 705 aa16.77■□□□□ 0.28
EPB42-204ENST00000563128 SETBP1Q9Y6X0 1596 aa16.77■□□□□ 0.27
EPB42-204ENST00000563128 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
EPB42-204ENST00000563128 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
EPB42-204ENST00000563128 WAPLQ7Z5K2 1190 aa16.75■□□□□ 0.27
EPB42-204ENST00000563128 PIK3R4Q99570 1358 aa16.75■□□□□ 0.27
EPB42-204ENST00000563128 PPLO60437 1756 aa16.74■□□□□ 0.27
EPB42-204ENST00000563128 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
EPB42-204ENST00000563128 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
EPB42-204ENST00000563128 TRAK1Q9UPV9 953 aa16.72■□□□□ 0.27
EPB42-204ENST00000563128 ROBO2Q9HCK4 1378 aa16.72■□□□□ 0.27
EPB42-204ENST00000563128 MSH6P52701 1360 aa16.71■□□□□ 0.27
EPB42-204ENST00000563128 DIP2AQ14689 1571 aa16.71■□□□□ 0.27
EPB42-204ENST00000563128 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
EPB42-204ENST00000563128 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
EPB42-204ENST00000563128 ATF3P18847 181 aa16.7■□□□□ 0.26
EPB42-204ENST00000563128 NBPF1Q3BBV0 1214 aa16.7■□□□□ 0.26
EPB42-204ENST00000563128 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
EPB42-204ENST00000563128 NWD1Q149M9 1564 aa16.69■□□□□ 0.26
EPB42-204ENST00000563128 NKTRP30414 1462 aaKnown RBP16.69■□□□□ 0.26
EPB42-204ENST00000563128 HSPA1LP34931 641 aa16.69■□□□□ 0.26
EPB42-204ENST00000563128 PLEKHH1Q9ULM0 1364 aa16.68■□□□□ 0.26
EPB42-204ENST00000563128 NUTM2FA1L443 756 aa16.68■□□□□ 0.26
EPB42-204ENST00000563128 CCER1Q8TC90 406 aaPredicted RBP16.68■□□□□ 0.26
EPB42-204ENST00000563128 SLAIN2Q9P270 581 aa16.68■□□□□ 0.26
EPB42-204ENST00000563128 MYOM2P54296 1465 aa16.67■□□□□ 0.26
EPB42-204ENST00000563128 LRPPRCP42704 1394 aaKnown RBP16.66■□□□□ 0.26
EPB42-204ENST00000563128 PRAM1Q96QH2 718 aa16.66■□□□□ 0.26
EPB42-204ENST00000563128 POGKQ9P215 609 aa16.66■□□□□ 0.26
EPB42-204ENST00000563128 IFT172Q9UG01 1749 aa16.66■□□□□ 0.26
EPB42-204ENST00000563128 NRXN1Q9ULB1 1477 aa16.66■□□□□ 0.26
EPB42-204ENST00000563128 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
EPB42-204ENST00000563128 XIRP1Q702N8 1843 aaKnown RBP16.65■□□□□ 0.26
EPB42-204ENST00000563128 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
EPB42-204ENST00000563128 CADPS2Q86UW7 1296 aa16.64■□□□□ 0.25
EPB42-204ENST00000563128 STAC3Q96MF2 364 aa16.64■□□□□ 0.25
EPB42-204ENST00000563128 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
EPB42-204ENST00000563128 TONSLQ96HA7 1378 aa16.64■□□□□ 0.25
EPB42-204ENST00000563128 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
EPB42-204ENST00000563128 ABCC11Q96J66 1382 aa16.63■□□□□ 0.25
EPB42-204ENST00000563128 SETD1AO15047 1707 aaKnown RBP16.62■□□□□ 0.25
EPB42-204ENST00000563128 XRN1Q8IZH2 1706 aaKnown RBP16.62■□□□□ 0.25
EPB42-204ENST00000563128 DDX17Q92841 729 aaKnown RBP16.61■□□□□ 0.25
EPB42-204ENST00000563128 MINK1Q8N4C8 1332 aaPredicted RBP16.6■□□□□ 0.25
EPB42-204ENST00000563128 PRAG1Q86YV5 1406 aa16.6■□□□□ 0.25
EPB42-204ENST00000563128 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
EPB42-204ENST00000563128 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
EPB42-204ENST00000563128 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
EPB42-204ENST00000563128 ADGRL3Q9HAR2 1447 aa16.57■□□□□ 0.24
EPB42-204ENST00000563128 BRINP3Q76B58 766 aa16.57■□□□□ 0.24
EPB42-204ENST00000563128 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms